RNA–Protein interactions for RNA: ENST00000566240.1

CNOT1-209, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 4

Gene CNOT1, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-209ENST00000566240 ZSWIM6Q9HCJ5 1215 aa9.91□□□□□ -0.82
CNOT1-209ENST00000566240 MAP2K5Q13163 448 aa9.9□□□□□ -0.82
CNOT1-209ENST00000566240 GPR153Q6NV75 609 aa9.9□□□□□ -0.82
CNOT1-209ENST00000566240 DDX12PQ92771 950 aa9.9□□□□□ -0.82
CNOT1-209ENST00000566240 IRF6O14896 467 aa9.89□□□□□ -0.83
CNOT1-209ENST00000566240 GNPATO15228 680 aa9.88□□□□□ -0.83
CNOT1-209ENST00000566240 FCHSD2O94868 740 aa9.88□□□□□ -0.83
CNOT1-209ENST00000566240 HIC1Q14526 733 aa9.87□□□□□ -0.83
CNOT1-209ENST00000566240 CCDC102AQ96A19 550 aa9.87□□□□□ -0.83
CNOT1-209ENST00000566240 EVI5O60447 810 aa9.86□□□□□ -0.83
CNOT1-209ENST00000566240 FAM117AQ9C073 453 aa9.85□□□□□ -0.83
CNOT1-209ENST00000566240 FECHP22830 423 aa9.84□□□□□ -0.83
CNOT1-209ENST00000566240 AMHR2Q16671 573 aa9.84□□□□□ -0.83
CNOT1-209ENST00000566240 ARSIQ5FYB1 569 aa9.84□□□□□ -0.83
CNOT1-209ENST00000566240 ZNF687Q8N1G0 1237 aa9.84□□□□□ -0.83
CNOT1-209ENST00000566240 PTCD2Q8WV60 388 aaKnown RBP9.83□□□□□ -0.84
CNOT1-209ENST00000566240 RNF166Q96A37 237 aaPredicted RBP9.83□□□□□ -0.84
CNOT1-209ENST00000566240 SUPT5HO00267 1087 aaKnown RBP9.82□□□□□ -0.84
CNOT1-209ENST00000566240 PRIM1P49642 420 aaKnown RBP9.82□□□□□ -0.84
CNOT1-209ENST00000566240 KHSRPQ92945 711 aaKnown RBP eCLIP9.82□□□□□ -0.842e-9■■■□□ 14.6
CNOT1-209ENST00000566240 ZNF316A6NFI3 1004 aaPredicted RBP9.81□□□□□ -0.84
CNOT1-209ENST00000566240 PTGDRQ13258 359 aa9.81□□□□□ -0.84
CNOT1-209ENST00000566240 DDRGK1Q96HY6 314 aa9.81□□□□□ -0.84
CNOT1-209ENST00000566240 PARP9Q8IXQ6 854 aa9.8□□□□□ -0.84
CNOT1-209ENST00000566240 ANO8Q9HCE9 1232 aaPredicted RBP9.8□□□□□ -0.84
CNOT1-209ENST00000566240 PLEKHG3A1L390 1219 aa9.79□□□□□ -0.84
CNOT1-209ENST00000566240 MYT1LQ9UL68 1186 aa9.79□□□□□ -0.84
CNOT1-209ENST00000566240 SLC34A2O95436 690 aa9.78□□□□□ -0.84
CNOT1-209ENST00000566240 TTLL12Q14166 644 aaPredicted RBP9.76□□□□□ -0.85
CNOT1-209ENST00000566240 HOMEZQ8IX15 550 aa9.76□□□□□ -0.85
CNOT1-209ENST00000566240 PHF14O94880 888 aa9.74□□□□□ -0.85
CNOT1-209ENST00000566240 EPAS1Q99814 870 aa9.74□□□□□ -0.85
CNOT1-209ENST00000566240 ZMYND15Q9H091 742 aa9.74□□□□□ -0.85
CNOT1-209ENST00000566240 EN1Q05925 392 aaPredicted RBP9.73□□□□□ -0.85
CNOT1-209ENST00000566240 NPDC1Q9NQX5 325 aaPredicted RBP9.73□□□□□ -0.85
CNOT1-209ENST00000566240 MAP3K7O43318 606 aa9.71□□□□□ -0.86
CNOT1-209ENST00000566240 NUDT7P0C024 238 aa9.71□□□□□ -0.86
CNOT1-209ENST00000566240 GIGYF2Q6Y7W6 1299 aaKnown RBP9.71□□□□□ -0.86
CNOT1-209ENST00000566240 ANKRD13DQ6ZTN6 518 aa9.71□□□□□ -0.86
CNOT1-209ENST00000566240 CDHR5Q9HBB8 845 aa9.71□□□□□ -0.86
CNOT1-209ENST00000566240 LSM11P83369 360 aaKnown RBP eCLIP9.7□□□□□ -0.86
CNOT1-209ENST00000566240 GOPCQ9HD26 462 aa9.7□□□□□ -0.86
CNOT1-209ENST00000566240 RBM33Q96EV2 1170 aaKnown RBP9.69□□□□□ -0.86
CNOT1-209ENST00000566240 PCDHGA10Q9Y5H3 936 aa9.69□□□□□ -0.86
CNOT1-209ENST00000566240 MS4A1P11836 297 aa9.68□□□□□ -0.86
CNOT1-209ENST00000566240 TYW1BQ6NUM6 668 aa9.68□□□□□ -0.86
CNOT1-209ENST00000566240 REPIN1Q9BWE0 567 aaKnown RBP9.68□□□□□ -0.86
CNOT1-209ENST00000566240 PCDHGA4Q9Y5G9 962 aa9.68□□□□□ -0.86
CNOT1-209ENST00000566240 RSPH6AQ9H0K4 717 aa9.67□□□□□ -0.86
CNOT1-209ENST00000566240 LHX6Q9UPM6 363 aa9.67□□□□□ -0.86
CNOT1-209ENST00000566240 TSR1Q2NL82 804 aaKnown RBP9.66□□□□□ -0.86
CNOT1-209ENST00000566240 CLCN1P35523 988 aa9.65□□□□□ -0.86
CNOT1-209ENST00000566240 POTEEQ6S8J3 1075 aa9.65□□□□□ -0.86
CNOT1-209ENST00000566240 FBXW7Q969H0 707 aa9.65□□□□□ -0.86
CNOT1-209ENST00000566240 TMUB1Q9BVT8 246 aa9.65□□□□□ -0.86
CNOT1-209ENST00000566240 PBX2P40425 430 aa9.64□□□□□ -0.87
CNOT1-209ENST00000566240 FLIIQ13045 1269 aa9.64□□□□□ -0.87
CNOT1-209ENST00000566240 KDM4FA0A1W2PPD8 638 aa9.63□□□□□ -0.87
CNOT1-209ENST00000566240 MDM2Q00987 491 aaPredicted RBP9.63□□□□□ -0.87
CNOT1-209ENST00000566240 JPH4Q96JJ6 628 aa9.63□□□□□ -0.87
CNOT1-209ENST00000566240 PCMTD1Q96MG8 357 aaPredicted RBP9.63□□□□□ -0.87
CNOT1-209ENST00000566240 PHOX2BQ99453 314 aa9.63□□□□□ -0.87
CNOT1-209ENST00000566240 GPCPD1Q9NPB8 672 aa9.63□□□□□ -0.87
CNOT1-209ENST00000566240 AXIN2Q9Y2T1 843 aa9.63□□□□□ -0.87
CNOT1-209ENST00000566240 SSTR3P32745 418 aaPredicted RBP9.61□□□□□ -0.87
CNOT1-209ENST00000566240 OATP04181 439 aa9.6□□□□□ -0.87
CNOT1-209ENST00000566240 FOSBP53539 338 aa9.6□□□□□ -0.87
CNOT1-209ENST00000566240 CERKQ8TCT0 537 aa9.6□□□□□ -0.87
CNOT1-209ENST00000566240 SH3D19Q5HYK7 790 aa9.59□□□□□ -0.87
CNOT1-209ENST00000566240 C6orf132Q5T0Z8 1188 aa9.59□□□□□ -0.87
CNOT1-209ENST00000566240 FAM161AQ3B820 660 aa9.58□□□□□ -0.88
CNOT1-209ENST00000566240 METTL3Q86U44 580 aaKnown RBP9.58□□□□□ -0.88
CNOT1-209ENST00000566240 ONECUT3O60422 494 aaPredicted RBP9.57□□□□□ -0.88
CNOT1-209ENST00000566240 PADI6Q6TGC4 694 aa9.56□□□□□ -0.88
CNOT1-209ENST00000566240 ZDHHC16Q969W1 377 aa9.56□□□□□ -0.88
CNOT1-209ENST00000566240 BEGAINQ9BUH8 593 aa9.56□□□□□ -0.88
CNOT1-209ENST00000566240 FAM217BQ9NTX9 383 aaPredicted RBP9.56□□□□□ -0.88
CNOT1-209ENST00000566240 SKIV2LQ15477 1246 aaKnown RBP9.55□□□□□ -0.88
CNOT1-209ENST00000566240 ZNF454Q8N9F8 522 aa9.55□□□□□ -0.88
CNOT1-209ENST00000566240 ADGRG1Q9Y653 693 aa9.55□□□□□ -0.88
CNOT1-209ENST00000566240 TTC13Q8NBP0 860 aa9.54□□□□□ -0.88
CNOT1-209ENST00000566240 PXYLP1Q8TE99 480 aa9.54□□□□□ -0.88
CNOT1-209ENST00000566240 NLRP7Q8WX94 980 aa9.54□□□□□ -0.88
CNOT1-209ENST00000566240 ARHGAP33O14559 1287 aa9.53□□□□□ -0.88
CNOT1-209ENST00000566240 ADGRD1Q6QNK2 874 aa9.53□□□□□ -0.88
CNOT1-209ENST00000566240 RBM27Q9P2N5 1060 aaKnown RBP9.53□□□□□ -0.88
CNOT1-209ENST00000566240 PSDA5PKW4 1024 aaPredicted RBP9.51□□□□□ -0.89
CNOT1-209ENST00000566240 PRSS12P56730 875 aa9.51□□□□□ -0.89
CNOT1-209ENST00000566240 ADAM33Q9BZ11 813 aa9.51□□□□□ -0.89
CNOT1-209ENST00000566240 ATP1B4Q9UN42 357 aaPredicted RBP9.51□□□□□ -0.89
CNOT1-209ENST00000566240 UBTFP17480 764 aaKnown RBP9.5□□□□□ -0.89
CNOT1-209ENST00000566240 PROCA1Q8NCQ7 364 aaPredicted RBP9.5□□□□□ -0.89
CNOT1-209ENST00000566240 C1orf115Q9H7X2 142 aa9.5□□□□□ -0.89
CNOT1-209ENST00000566240 POLR3EQ9NVU0 708 aa9.5□□□□□ -0.89
CNOT1-209ENST00000566240 PSEN2P49810 448 aa9.49□□□□□ -0.89
CNOT1-209ENST00000566240 DMRTA1Q5VZB9 504 aa9.49□□□□□ -0.89
CNOT1-209ENST00000566240 CDCA7LQ96GN5 454 aa9.49□□□□□ -0.89
CNOT1-209ENST00000566240 A6NJR5 290 aa9.48□□□□□ -0.89
CNOT1-209ENST00000566240 APBB1O00213 710 aa9.48□□□□□ -0.89
CNOT1-209ENST00000566240 RBM46Q8TBY0 533 aaKnown RBP9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms