RNA–Protein interactions for RNA: ENST00000566221.5

SPG7-213, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 734 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-213ENST00000566221 SETD5Q9C0A6 1442 aa22.19■■□□□ 1.14
SPG7-213ENST00000566221 UNC13BO14795 1591 aa22.18■■□□□ 1.14
SPG7-213ENST00000566221 PRDM15P57071 1507 aaPredicted RBP22.14■■□□□ 1.13
SPG7-213ENST00000566221 MROH1Q8NDA8 1641 aa22.13■■□□□ 1.13
SPG7-213ENST00000566221 RAB3GAP2Q9H2M9 1393 aa22.12■■□□□ 1.13
SPG7-213ENST00000566221 ZC3H13Q5T200 1668 aaKnown RBP22.1■■□□□ 1.13
SPG7-213ENST00000566221 FAM135AQ9P2D6 1515 aa22.09■■□□□ 1.13
SPG7-213ENST00000566221 IQGAP3Q86VI3 1631 aa22.09■■□□□ 1.13
SPG7-213ENST00000566221 KDM5DQ9BY66 1539 aa22.08■■□□□ 1.13
SPG7-213ENST00000566221 KIF3BO15066 747 aa22.08■■□□□ 1.13
SPG7-213ENST00000566221 CEP152O94986 1710 aa22.08■■□□□ 1.12
SPG7-213ENST00000566221 ACIN1Q9UKV3 1341 aaKnown RBP22.07■■□□□ 1.12
SPG7-213ENST00000566221 VWDEQ8N2E2 1590 aa22.06■■□□□ 1.12
SPG7-213ENST00000566221 FER1L4A9Z1Z3 1794 aa22.06■■□□□ 1.12
SPG7-213ENST00000566221 ARID4BQ4LE39 1312 aaPredicted RBP22.06■■□□□ 1.12
SPG7-213ENST00000566221 HRCP23327 699 aa22.04■■□□□ 1.12
SPG7-213ENST00000566221 TET3O43151 1660 aa22.02■■□□□ 1.12
SPG7-213ENST00000566221 CLTCQ00610 1675 aaKnown RBP22.01■■□□□ 1.11
SPG7-213ENST00000566221 KANK1Q14678 1352 aa22.01■■□□□ 1.11
SPG7-213ENST00000566221 MROH2AA6NES4 1674 aa22.01■■□□□ 1.11
SPG7-213ENST00000566221 ADAMTSL3P82987 1691 aa22.01■■□□□ 1.11
SPG7-213ENST00000566221 CAMSAP1Q5T5Y3 1602 aa22■■□□□ 1.11
SPG7-213ENST00000566221 ABCC3O15438 1527 aa22■■□□□ 1.11
SPG7-213ENST00000566221 GGT6Q6P531 493 aa21.99■■□□□ 1.11
SPG7-213ENST00000566221 LMTK2Q8IWU2 1503 aa21.99■■□□□ 1.11
SPG7-213ENST00000566221 NUP155O75694 1391 aa21.98■■□□□ 1.11
SPG7-213ENST00000566221 PPP6R1Q9UPN7 881 aa21.97■■□□□ 1.11
SPG7-213ENST00000566221 MADDQ8WXG6 1647 aa21.97■■□□□ 1.11
SPG7-213ENST00000566221 PZPP20742 1482 aa21.96■■□□□ 1.11
SPG7-213ENST00000566221 LMTK3Q96Q04 1460 aa21.96■■□□□ 1.11
SPG7-213ENST00000566221 TRIM52Q96A61 297 aa21.96■■□□□ 1.11
SPG7-213ENST00000566221 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.96■■□□□ 1.112e-8■□□□□ 11.1
SPG7-213ENST00000566221 MLECQ14165 292 aa21.95■■□□□ 1.1
SPG7-213ENST00000566221 EFCAB6Q5THR3 1501 aa21.95■■□□□ 1.1
SPG7-213ENST00000566221 RIMS1Q86UR5 1692 aaKnown RBP21.95■■□□□ 1.1
SPG7-213ENST00000566221 CNTLNQ9NXG0 1405 aa21.94■■□□□ 1.1
SPG7-213ENST00000566221 E9PCH4 1651 aa21.93■■□□□ 1.1
SPG7-213ENST00000566221 WASHC2CQ9Y4E1 1318 aa21.91■■□□□ 1.1
SPG7-213ENST00000566221 C3P01024 1663 aa21.89■■□□□ 1.1
SPG7-213ENST00000566221 ESF1Q9H501 851 aaKnown RBP21.89■■□□□ 1.09
SPG7-213ENST00000566221 CFAP65Q6ZU64 1925 aaKnown RBP21.88■■□□□ 1.09
SPG7-213ENST00000566221 SPHKAPQ2M3C7 1700 aa21.87■■□□□ 1.09
SPG7-213ENST00000566221 RPRD2Q5VT52 1461 aaKnown RBP21.87■■□□□ 1.09
SPG7-213ENST00000566221 PREX1Q8TCU6 1659 aa21.86■■□□□ 1.09
SPG7-213ENST00000566221 SLC4A1APQ9BWU0 796 aaKnown RBP21.86■■□□□ 1.09
SPG7-213ENST00000566221 ARHGAP31Q2M1Z3 1444 aa21.86■■□□□ 1.09
SPG7-213ENST00000566221 MPHOSPH9Q99550 1183 aa21.84■■□□□ 1.09
SPG7-213ENST00000566221 DHX57Q6P158 1386 aaKnown RBP21.83■■□□□ 1.08
SPG7-213ENST00000566221 PTPRMP28827 1452 aa21.83■■□□□ 1.08
SPG7-213ENST00000566221 NPATQ14207 1427 aa21.82■■□□□ 1.08
SPG7-213ENST00000566221 PKD2Q13563 968 aa21.79■■□□□ 1.08
SPG7-213ENST00000566221 ZMYM3Q14202 1370 aa21.78■■□□□ 1.08
SPG7-213ENST00000566221 SPATA31D1Q6ZQQ2 1576 aa21.78■■□□□ 1.08
SPG7-213ENST00000566221 ERVK-7P63135 1459 aa21.77■■□□□ 1.07
SPG7-213ENST00000566221 TRPM2O94759 1503 aa21.76■■□□□ 1.07
SPG7-213ENST00000566221 SOCS7O14512 581 aa21.75■■□□□ 1.07
SPG7-213ENST00000566221 ILDR2Q71H61 639 aa21.75■■□□□ 1.07
SPG7-213ENST00000566221 DISP3Q9P2K9 1392 aa21.74■■□□□ 1.07
SPG7-213ENST00000566221 SYNMO15061 1565 aa21.74■■□□□ 1.07
SPG7-213ENST00000566221 PTPRTO14522 1441 aa21.73■■□□□ 1.07
SPG7-213ENST00000566221 NOS1P29475 1434 aa21.73■■□□□ 1.07
SPG7-213ENST00000566221 PIK3C2BO00750 1634 aa21.73■■□□□ 1.07
SPG7-213ENST00000566221 SETD1BQ9UPS6 1966 aaKnown RBP21.72■■□□□ 1.07
SPG7-213ENST00000566221 CERKQ8TCT0 537 aa21.71■■□□□ 1.07
SPG7-213ENST00000566221 CLTCL1P53675 1640 aa21.7■■□□□ 1.06
SPG7-213ENST00000566221 HSPA2P54652 639 aa21.7■■□□□ 1.06
SPG7-213ENST00000566221 FOXD1Q16676 465 aa21.7■■□□□ 1.06
SPG7-213ENST00000566221 KIF1BO60333 1816 aa21.7■■□□□ 1.06
SPG7-213ENST00000566221 PLPPR3Q6T4P5 718 aa21.69■■□□□ 1.06
SPG7-213ENST00000566221 PLA2R1Q13018 1463 aa21.69■■□□□ 1.06
SPG7-213ENST00000566221 MYO3AQ8NEV4 1616 aa21.69■■□□□ 1.06
SPG7-213ENST00000566221 ANKRD30BQ9BXX2 1392 aa21.68■■□□□ 1.06
SPG7-213ENST00000566221 TNRQ92752 1358 aa21.66■■□□□ 1.06
SPG7-213ENST00000566221 ZNF142P52746 1687 aaPredicted RBP21.66■■□□□ 1.06
SPG7-213ENST00000566221 UGGT1Q9NYU2 1555 aa21.65■■□□□ 1.06
SPG7-213ENST00000566221 CLSPNQ9HAW4 1339 aa21.65■■□□□ 1.06
SPG7-213ENST00000566221 CEBPAP49715 358 aaPredicted RBP21.65■■□□□ 1.06
SPG7-213ENST00000566221 FBXO31Q5XUX0 539 aaPredicted RBP21.65■■□□□ 1.06
SPG7-213ENST00000566221 CCER1Q8TC90 406 aaPredicted RBP21.65■■□□□ 1.06
SPG7-213ENST00000566221 CCDC144AA2RUR9 1427 aa21.64■■□□□ 1.06
SPG7-213ENST00000566221 KDM5AP29375 1690 aaKnown RBP21.64■■□□□ 1.05
SPG7-213ENST00000566221 MYO5BQ9ULV0 1848 aa21.64■■□□□ 1.05
SPG7-213ENST00000566221 NLRP1Q9C000 1473 aa21.63■■□□□ 1.05
SPG7-213ENST00000566221 UBR1Q8IWV7 1749 aa21.6■■□□□ 1.05
SPG7-213ENST00000566221 ADGRB3O60242 1522 aa21.6■■□□□ 1.05
SPG7-213ENST00000566221 NEURL4Q96JN8 1562 aa21.59■■□□□ 1.05
SPG7-213ENST00000566221 CEP170BQ9Y4F5 1589 aaPredicted RBP21.58■■□□□ 1.05
SPG7-213ENST00000566221 SLC52A1Q9NWF4 448 aa21.58■■□□□ 1.05
SPG7-213ENST00000566221 TMEM131LA2VDJ0 1609 aa21.58■■□□□ 1.04
SPG7-213ENST00000566221 A2ML1A8K2U0 1454 aa21.55■■□□□ 1.04
SPG7-213ENST00000566221 UHRF1BP1Q6BDS2 1440 aa21.54■■□□□ 1.04
SPG7-213ENST00000566221 IFT172Q9UG01 1749 aa21.52■■□□□ 1.04
SPG7-213ENST00000566221 IDI1Q13907 227 aa21.51■■□□□ 1.03
SPG7-213ENST00000566221 PPLO60437 1756 aa21.51■■□□□ 1.03
SPG7-213ENST00000566221 SPATA31E1Q6ZUB1 1445 aa21.5■■□□□ 1.03
SPG7-213ENST00000566221 SIN3AQ96ST3 1273 aa21.48■■□□□ 1.03
SPG7-213ENST00000566221 NEUROD1Q13562 356 aa21.46■■□□□ 1.03
SPG7-213ENST00000566221 STAG3Q9UJ98 1225 aa21.46■■□□□ 1.03
SPG7-213ENST00000566221 CHGAP10645 457 aaKnown RBP21.45■■□□□ 1.02
SPG7-213ENST00000566221 NEXMIFQ5QGS0 1516 aa21.44■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms