RNA–Protein interactions for RNA: ENST00000564814.1

GINS3-205, Transcript of GINS complex subunit 3, humanhuman

TSL 4

Gene GINS3, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-205ENST00000564814 PIAS4Q8N2W9 510 aaPredicted RBP11.26□□□□□ -0.61
GINS3-205ENST00000564814 ANKRD50Q9ULJ7 1429 aa11.26□□□□□ -0.61
GINS3-205ENST00000564814 KDM5DQ9BY66 1539 aa11.25□□□□□ -0.61
GINS3-205ENST00000564814 DEPDC5O75140 1603 aa11.25□□□□□ -0.61
GINS3-205ENST00000564814 PCGF6Q9BYE7 350 aa11.25□□□□□ -0.61
GINS3-205ENST00000564814 DHX29Q7Z478 1369 aaKnown RBP11.25□□□□□ -0.61
GINS3-205ENST00000564814 FAM135AQ9P2D6 1515 aa11.25□□□□□ -0.61
GINS3-205ENST00000564814 UNC13BO14795 1591 aa11.24□□□□□ -0.61
GINS3-205ENST00000564814 RNF17Q9BXT8 1623 aaKnown RBP11.24□□□□□ -0.61
GINS3-205ENST00000564814 RAPGEF3O95398 923 aa11.23□□□□□ -0.61
GINS3-205ENST00000564814 ATP10AO60312 1499 aa11.23□□□□□ -0.61
GINS3-205ENST00000564814 A2MP01023 1474 aa11.23□□□□□ -0.61
GINS3-205ENST00000564814 PRDM15P57071 1507 aaPredicted RBP11.22□□□□□ -0.61
GINS3-205ENST00000564814 VWDEQ8N2E2 1590 aa11.22□□□□□ -0.61
GINS3-205ENST00000564814 RAB3GAP2Q9H2M9 1393 aa11.22□□□□□ -0.61
GINS3-205ENST00000564814 YEATS2Q9ULM3 1422 aa11.21□□□□□ -0.61
GINS3-205ENST00000564814 MROH1Q8NDA8 1641 aa11.2□□□□□ -0.62
GINS3-205ENST00000564814 ITGAEP38570 1179 aa11.19□□□□□ -0.62
GINS3-205ENST00000564814 CHIC2Q9UKJ5 165 aa11.19□□□□□ -0.62
GINS3-205ENST00000564814 IQGAP3Q86VI3 1631 aa11.19□□□□□ -0.62
GINS3-205ENST00000564814 RRP7BPQ9NSQ0 103 aa11.18□□□□□ -0.62
GINS3-205ENST00000564814 LMTK2Q8IWU2 1503 aa11.18□□□□□ -0.62
GINS3-205ENST00000564814 ZC3H13Q5T200 1668 aaKnown RBP11.17□□□□□ -0.62
GINS3-205ENST00000564814 MSH5O43196 834 aa11.17□□□□□ -0.62
GINS3-205ENST00000564814 CLSPNQ9HAW4 1339 aa11.16□□□□□ -0.62
GINS3-205ENST00000564814 SIGLEC1Q9BZZ2 1709 aa11.15□□□□□ -0.63
GINS3-205ENST00000564814 PZPP20742 1482 aa11.14□□□□□ -0.63
GINS3-205ENST00000564814 TET3O43151 1660 aa11.13□□□□□ -0.63
GINS3-205ENST00000564814 DHX57Q6P158 1386 aaKnown RBP11.13□□□□□ -0.63
GINS3-205ENST00000564814 RPRD2Q5VT52 1461 aaKnown RBP11.12□□□□□ -0.63
GINS3-205ENST00000564814 ARID4BQ4LE39 1312 aaPredicted RBP11.11□□□□□ -0.63
GINS3-205ENST00000564814 ARHGAP31Q2M1Z3 1444 aa11.11□□□□□ -0.63
GINS3-205ENST00000564814 ADAMTSL3P82987 1691 aa11.11□□□□□ -0.63
GINS3-205ENST00000564814 EFCAB6Q5THR3 1501 aa11.1□□□□□ -0.63
GINS3-205ENST00000564814 MROH2AA6NES4 1674 aa11.1□□□□□ -0.63
GINS3-205ENST00000564814 ABCC3O15438 1527 aa11.09□□□□□ -0.63
GINS3-205ENST00000564814 NUP155O75694 1391 aa11.09□□□□□ -0.63
GINS3-205ENST00000564814 KANK1Q14678 1352 aa11.09□□□□□ -0.63
GINS3-205ENST00000564814 KIF3BO15066 747 aa11.09□□□□□ -0.63
GINS3-205ENST00000564814 CNTLNQ9NXG0 1405 aa11.09□□□□□ -0.63
GINS3-205ENST00000564814 PTPRMP28827 1452 aa11.08□□□□□ -0.64
GINS3-205ENST00000564814 MYT1LQ9UL68 1186 aa11.08□□□□□ -0.64
GINS3-205ENST00000564814 MADDQ8WXG6 1647 aa11.08□□□□□ -0.64
GINS3-205ENST00000564814 CAMSAP1Q5T5Y3 1602 aa11.07□□□□□ -0.64
GINS3-205ENST00000564814 CEP152O94986 1710 aa11.06□□□□□ -0.64
GINS3-205ENST00000564814 E9PCH4 1651 aa11.06□□□□□ -0.64
GINS3-205ENST00000564814 RIMS1Q86UR5 1692 aaKnown RBP11.06□□□□□ -0.64
GINS3-205ENST00000564814 MPHOSPH9Q99550 1183 aa11.06□□□□□ -0.64
GINS3-205ENST00000564814 PTPRTO14522 1441 aa11.06□□□□□ -0.64
GINS3-205ENST00000564814 NEURL4Q96JN8 1562 aa11.06□□□□□ -0.64
GINS3-205ENST00000564814 CERKQ8TCT0 537 aa11.05□□□□□ -0.64
GINS3-205ENST00000564814 TRPM2O94759 1503 aa11.04□□□□□ -0.64
GINS3-205ENST00000564814 ANKRD30BQ9BXX2 1392 aa11.03□□□□□ -0.64
GINS3-205ENST00000564814 NPATQ14207 1427 aa11.03□□□□□ -0.64
GINS3-205ENST00000564814 MLECQ14165 292 aa11.03□□□□□ -0.64
GINS3-205ENST00000564814 SLC4A1APQ9BWU0 796 aaKnown RBP11.03□□□□□ -0.64
GINS3-205ENST00000564814 SPHKAPQ2M3C7 1700 aa11.03□□□□□ -0.64
GINS3-205ENST00000564814 NOS1P29475 1434 aa11.02□□□□□ -0.64
GINS3-205ENST00000564814 TRIM52Q96A61 297 aa11.02□□□□□ -0.65
GINS3-205ENST00000564814 FER1L4A9Z1Z3 1794 aa11.02□□□□□ -0.65
GINS3-205ENST00000564814 CLTCQ00610 1675 aaKnown RBP11.01□□□□□ -0.65
GINS3-205ENST00000564814 PIK3C2BO00750 1634 aa11.01□□□□□ -0.65
GINS3-205ENST00000564814 PLA2R1Q13018 1463 aa11□□□□□ -0.65
GINS3-205ENST00000564814 PKD2Q13563 968 aa11□□□□□ -0.65
GINS3-205ENST00000564814 GGT6Q6P531 493 aa11□□□□□ -0.65
GINS3-205ENST00000564814 PREX1Q8TCU6 1659 aa11□□□□□ -0.65
GINS3-205ENST00000564814 WASHC2CQ9Y4E1 1318 aa11□□□□□ -0.65
GINS3-205ENST00000564814 KDM5AP29375 1690 aaKnown RBP10.99□□□□□ -0.65
GINS3-205ENST00000564814 TIMELESSQ9UNS1 1208 aa10.99□□□□□ -0.65
GINS3-205ENST00000564814 ERVK-7P63135 1459 aa10.98□□□□□ -0.65
GINS3-205ENST00000564814 C3P01024 1663 aa10.97□□□□□ -0.65
GINS3-205ENST00000564814 SYNMO15061 1565 aa10.96□□□□□ -0.65
GINS3-205ENST00000564814 ZMYM3Q14202 1370 aa10.96□□□□□ -0.65
GINS3-205ENST00000564814 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.96□□□□□ -0.65
GINS3-205ENST00000564814 CCDC144AA2RUR9 1427 aa10.95□□□□□ -0.66
GINS3-205ENST00000564814 HSPA2P54652 639 aa10.95□□□□□ -0.66
GINS3-205ENST00000564814 CCER1Q8TC90 406 aaPredicted RBP10.95□□□□□ -0.66
GINS3-205ENST00000564814 CLTCL1P53675 1640 aa10.95□□□□□ -0.66
GINS3-205ENST00000564814 SETD1BQ9UPS6 1966 aaKnown RBP10.94□□□□□ -0.66
GINS3-205ENST00000564814 SLC52A1Q9NWF4 448 aa10.93□□□□□ -0.66
GINS3-205ENST00000564814 ADGRB3O60242 1522 aa10.93□□□□□ -0.66
GINS3-205ENST00000564814 KIF1BO60333 1816 aa10.93□□□□□ -0.66
GINS3-205ENST00000564814 NLRP1Q9C000 1473 aa10.93□□□□□ -0.66
GINS3-205ENST00000564814 SPATA31E1Q6ZUB1 1445 aa10.92□□□□□ -0.66
GINS3-205ENST00000564814 ZEB1P37275 1124 aaPredicted RBP10.92□□□□□ -0.66
GINS3-205ENST00000564814 POTEDQ86YR6 584 aa10.92□□□□□ -0.66
GINS3-205ENST00000564814 STAC3Q96MF2 364 aa10.92□□□□□ -0.66
GINS3-205ENST00000564814 CEBPAP49715 358 aaPredicted RBP10.91□□□□□ -0.66
GINS3-205ENST00000564814 ESF1Q9H501 851 aaKnown RBP10.91□□□□□ -0.66
GINS3-205ENST00000564814 ZNF142P52746 1687 aaPredicted RBP10.9□□□□□ -0.66
GINS3-205ENST00000564814 TMEM131LA2VDJ0 1609 aa10.9□□□□□ -0.66
GINS3-205ENST00000564814 IFT172Q9UG01 1749 aa10.89□□□□□ -0.67
GINS3-205ENST00000564814 CFAP65Q6ZU64 1925 aaKnown RBP10.89□□□□□ -0.67
GINS3-205ENST00000564814 TNRQ92752 1358 aa10.88□□□□□ -0.67
GINS3-205ENST00000564814 MYO3AQ8NEV4 1616 aa10.87□□□□□ -0.67
GINS3-205ENST00000564814 MYOM2P54296 1465 aa10.87□□□□□ -0.67
GINS3-205ENST00000564814 UGGT1Q9NYU2 1555 aa10.86□□□□□ -0.67
GINS3-205ENST00000564814 ZFYVE9O95405 1425 aa10.86□□□□□ -0.67
GINS3-205ENST00000564814 UHRF1BP1Q6BDS2 1440 aa10.86□□□□□ -0.67
GINS3-205ENST00000564814 UBR1Q8IWV7 1749 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms