RNA–Protein interactions for RNA: ENST00000564476.1

SPNS1-206, Transcript of sphingolipid transporter 1 (putative), humanhuman

TSL 3

Gene SPNS1, Length 890 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS1-206ENST00000564476 AGLP35573 1532 aa27.86■■■□□ 2.05
SPNS1-206ENST00000564476 SIGLEC1Q9BZZ2 1709 aa27.84■■■□□ 2.05
SPNS1-206ENST00000564476 PPP6R1Q9UPN7 881 aa27.82■■■□□ 2.04
SPNS1-206ENST00000564476 MADDQ8WXG6 1647 aa27.81■■■□□ 2.04
SPNS1-206ENST00000564476 TRIM52Q96A61 297 aa27.81■■■□□ 2.04
SPNS1-206ENST00000564476 UNC13BO14795 1591 aa27.8■■■□□ 2.04
SPNS1-206ENST00000564476 DEPDC5O75140 1603 aa27.79■■■□□ 2.04
SPNS1-206ENST00000564476 RNF17Q9BXT8 1623 aaKnown RBP27.78■■■□□ 2.04
SPNS1-206ENST00000564476 KANK1Q14678 1352 aa27.77■■■□□ 2.04
SPNS1-206ENST00000564476 ARID4BQ4LE39 1312 aaPredicted RBP27.77■■■□□ 2.04
SPNS1-206ENST00000564476 PTPRMP28827 1452 aa27.76■■■□□ 2.04
SPNS1-206ENST00000564476 NUP155O75694 1391 aa27.76■■■□□ 2.03
SPNS1-206ENST00000564476 KDM5DQ9BY66 1539 aa27.75■■■□□ 2.03
SPNS1-206ENST00000564476 GGT6Q6P531 493 aa27.74■■■□□ 2.03
SPNS1-206ENST00000564476 RIMS1Q86UR5 1692 aaKnown RBP27.73■■■□□ 2.03
SPNS1-206ENST00000564476 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.73■■■□□ 2.03
SPNS1-206ENST00000564476 MROH1Q8NDA8 1641 aa27.71■■■□□ 2.03
SPNS1-206ENST00000564476 MPHOSPH9Q99550 1183 aa27.7■■■□□ 2.02
SPNS1-206ENST00000564476 PRDM15P57071 1507 aaPredicted RBP27.7■■■□□ 2.02
SPNS1-206ENST00000564476 IQGAP3Q86VI3 1631 aa27.69■■■□□ 2.02
SPNS1-206ENST00000564476 VWDEQ8N2E2 1590 aa27.69■■■□□ 2.02
SPNS1-206ENST00000564476 SLC4A1APQ9BWU0 796 aaKnown RBP27.68■■■□□ 2.02
SPNS1-206ENST00000564476 WASHC2CQ9Y4E1 1318 aa27.67■■■□□ 2.02
SPNS1-206ENST00000564476 PZPP20742 1482 aa27.66■■■□□ 2.02
SPNS1-206ENST00000564476 FAM135AQ9P2D6 1515 aa27.66■■■□□ 2.02
SPNS1-206ENST00000564476 DHX57Q6P158 1386 aaKnown RBP27.65■■■□□ 2.02
SPNS1-206ENST00000564476 FER1L4A9Z1Z3 1794 aa27.64■■■□□ 2.02
SPNS1-206ENST00000564476 LMTK2Q8IWU2 1503 aa27.62■■■□□ 2.01
SPNS1-206ENST00000564476 ESF1Q9H501 851 aaKnown RBP27.61■■■□□ 2.01
SPNS1-206ENST00000564476 MLECQ14165 292 aa27.6■■■□□ 2.01
SPNS1-206ENST00000564476 ZC3H13Q5T200 1668 aaKnown RBP27.59■■■□□ 2.01
SPNS1-206ENST00000564476 CLSPNQ9HAW4 1339 aa27.58■■■□□ 2.01
SPNS1-206ENST00000564476 TET3O43151 1660 aa27.57■■■□□ 2
SPNS1-206ENST00000564476 PKD2Q13563 968 aa27.57■■■□□ 2
SPNS1-206ENST00000564476 CEP152O94986 1710 aa27.56■■■□□ 2
SPNS1-206ENST00000564476 CCER1Q8TC90 406 aaPredicted RBP27.56■■■□□ 2
SPNS1-206ENST00000564476 CNTLNQ9NXG0 1405 aa27.56■■■□□ 2
SPNS1-206ENST00000564476 ABCC3O15438 1527 aa27.55■■■□□ 2
SPNS1-206ENST00000564476 ARHGAP31Q2M1Z3 1444 aa27.53■■■□□ 2
SPNS1-206ENST00000564476 RPRD2Q5VT52 1461 aaKnown RBP27.5■■□□□ 1.99
SPNS1-206ENST00000564476 LMTK3Q96Q04 1460 aa27.5■■□□□ 1.99
SPNS1-206ENST00000564476 E9PCH4 1651 aa27.49■■□□□ 1.99
SPNS1-206ENST00000564476 CAMSAP1Q5T5Y3 1602 aa27.49■■□□□ 1.99
SPNS1-206ENST00000564476 EFCAB6Q5THR3 1501 aa27.48■■□□□ 1.99
SPNS1-206ENST00000564476 CLTCQ00610 1675 aaKnown RBP27.46■■□□□ 1.99
SPNS1-206ENST00000564476 ZMYM3Q14202 1370 aa27.45■■□□□ 1.98
SPNS1-206ENST00000564476 PLPPR3Q6T4P5 718 aa27.43■■□□□ 1.98
SPNS1-206ENST00000564476 ANKRD30BQ9BXX2 1392 aa27.43■■□□□ 1.98
SPNS1-206ENST00000564476 MROH2AA6NES4 1674 aa27.43■■□□□ 1.98
SPNS1-206ENST00000564476 NPATQ14207 1427 aa27.42■■□□□ 1.98
SPNS1-206ENST00000564476 FOXD1Q16676 465 aa27.42■■□□□ 1.98
SPNS1-206ENST00000564476 PTPRTO14522 1441 aa27.41■■□□□ 1.98
SPNS1-206ENST00000564476 CFAP65Q6ZU64 1925 aaKnown RBP27.39■■□□□ 1.97
SPNS1-206ENST00000564476 SPHKAPQ2M3C7 1700 aa27.36■■□□□ 1.97
SPNS1-206ENST00000564476 PREX1Q8TCU6 1659 aa27.35■■□□□ 1.97
SPNS1-206ENST00000564476 NOS1P29475 1434 aa27.34■■□□□ 1.97
SPNS1-206ENST00000564476 C3P01024 1663 aa27.34■■□□□ 1.97
SPNS1-206ENST00000564476 PLA2R1Q13018 1463 aa27.33■■□□□ 1.97
SPNS1-206ENST00000564476 SLC52A1Q9NWF4 448 aa27.32■■□□□ 1.96
SPNS1-206ENST00000564476 CEBPAP49715 358 aaPredicted RBP27.31■■□□□ 1.96
SPNS1-206ENST00000564476 FBXO31Q5XUX0 539 aaPredicted RBP27.3■■□□□ 1.96
SPNS1-206ENST00000564476 TRPM2O94759 1503 aa27.3■■□□□ 1.96
SPNS1-206ENST00000564476 CCDC144AA2RUR9 1427 aa27.29■■□□□ 1.96
SPNS1-206ENST00000564476 ERVK-7P63135 1459 aa27.28■■□□□ 1.96
SPNS1-206ENST00000564476 TIMELESSQ9UNS1 1208 aa27.28■■□□□ 1.96
SPNS1-206ENST00000564476 HSPA2P54652 639 aa27.27■■□□□ 1.96
SPNS1-206ENST00000564476 SIN3AQ96ST3 1273 aa27.26■■□□□ 1.95
SPNS1-206ENST00000564476 SPATA31D1Q6ZQQ2 1576 aa27.26■■□□□ 1.95
SPNS1-206ENST00000564476 SYNMO15061 1565 aa27.22■■□□□ 1.95
SPNS1-206ENST00000564476 SETD1BQ9UPS6 1966 aaKnown RBP27.22■■□□□ 1.95
SPNS1-206ENST00000564476 NEUROD1Q13562 356 aa27.22■■□□□ 1.95
SPNS1-206ENST00000564476 TNRQ92752 1358 aa27.22■■□□□ 1.95
SPNS1-206ENST00000564476 PIK3C2BO00750 1634 aa27.2■■□□□ 1.95
SPNS1-206ENST00000564476 CLTCL1P53675 1640 aa27.2■■□□□ 1.95
SPNS1-206ENST00000564476 ZEB1P37275 1124 aaPredicted RBP27.2■■□□□ 1.94
SPNS1-206ENST00000564476 IDI1Q13907 227 aa27.19■■□□□ 1.94
SPNS1-206ENST00000564476 ILDR1Q86SU0 546 aaPredicted RBP27.18■■□□□ 1.94
SPNS1-206ENST00000564476 UHRF1BP1Q6BDS2 1440 aa27.17■■□□□ 1.94
SPNS1-206ENST00000564476 KIF1BO60333 1816 aa27.17■■□□□ 1.94
SPNS1-206ENST00000564476 NEURL4Q96JN8 1562 aa27.14■■□□□ 1.94
SPNS1-206ENST00000564476 NLRP1Q9C000 1473 aa27.14■■□□□ 1.94
SPNS1-206ENST00000564476 UGGT1Q9NYU2 1555 aa27.14■■□□□ 1.93
SPNS1-206ENST00000564476 TONSLQ96HA7 1378 aa27.12■■□□□ 1.93
SPNS1-206ENST00000564476 STAC3Q96MF2 364 aa27.12■■□□□ 1.93
SPNS1-206ENST00000564476 STRCQ7RTU9 1775 aa27.12■■□□□ 1.93
SPNS1-206ENST00000564476 SPATA31E1Q6ZUB1 1445 aa27.09■■□□□ 1.93
SPNS1-206ENST00000564476 STAG3Q9UJ98 1225 aa27.09■■□□□ 1.93
SPNS1-206ENST00000564476 RPGRIP1LQ68CZ1 1315 aa27.09■■□□□ 1.93
SPNS1-206ENST00000564476 CHGAP10645 457 aaKnown RBP27.07■■□□□ 1.92
SPNS1-206ENST00000564476 KDM5AP29375 1690 aaKnown RBP27.05■■□□□ 1.92
SPNS1-206ENST00000564476 RGL3Q3MIN7 710 aa27.05■■□□□ 1.92
SPNS1-206ENST00000564476 L3MBTL2Q969R5 705 aa27.05■■□□□ 1.92
SPNS1-206ENST00000564476 ADGRB3O60242 1522 aa27.04■■□□□ 1.92
SPNS1-206ENST00000564476 TMEM131LA2VDJ0 1609 aa27.04■■□□□ 1.92
SPNS1-206ENST00000564476 MYO3AQ8NEV4 1616 aa27.03■■□□□ 1.92
SPNS1-206ENST00000564476 HDGFP51858 240 aaKnown RBP27.02■■□□□ 1.92
SPNS1-206ENST00000564476 THEMISQ8N1K5 641 aaPredicted RBP27.02■■□□□ 1.92
SPNS1-206ENST00000564476 MYO5BQ9ULV0 1848 aa27.02■■□□□ 1.92
SPNS1-206ENST00000564476 A2ML1A8K2U0 1454 aa27.01■■□□□ 1.91
SPNS1-206ENST00000564476 ZNF326Q5BKZ1 582 aaKnown RBP27.01■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms