RNA–Protein interactions for RNA: ENST00000564011.5

LCMT1-204, Transcript of leucine carboxyl methyltransferase 1, humanhuman

TSL 5

Gene LCMT1, Length 1,168 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT1-204ENST00000564011 THEMISQ8N1K5 641 aaPredicted RBP16.79■□□□□ 0.28
LCMT1-204ENST00000564011 PIP4K2BP78356 416 aa16.78■□□□□ 0.28
LCMT1-204ENST00000564011 PHF23Q9BUL5 403 aaPredicted RBP16.78■□□□□ 0.28
LCMT1-204ENST00000564011 DHX29Q7Z478 1369 aaKnown RBP16.77■□□□□ 0.28
LCMT1-204ENST00000564011 TNRQ92752 1358 aa16.77■□□□□ 0.28
LCMT1-204ENST00000564011 WASHC2CQ9Y4E1 1318 aa16.77■□□□□ 0.28
LCMT1-204ENST00000564011 EHBP1L1Q8N3D4 1523 aa16.77■□□□□ 0.28
LCMT1-204ENST00000564011 DNMT1P26358 1616 aaKnown RBP16.77■□□□□ 0.27
LCMT1-204ENST00000564011 POLR1AO95602 1720 aaPredicted RBP16.76■□□□□ 0.27
LCMT1-204ENST00000564011 KDM5DQ9BY66 1539 aa16.75■□□□□ 0.27
LCMT1-204ENST00000564011 KIF3BO15066 747 aa16.75■□□□□ 0.27
LCMT1-204ENST00000564011 SHANK2Q9UPX8 1470 aa16.74■□□□□ 0.27
LCMT1-204ENST00000564011 ALKQ9UM73 1620 aa16.74■□□□□ 0.27
LCMT1-204ENST00000564011 PZPP20742 1482 aa16.73■□□□□ 0.27
LCMT1-204ENST00000564011 NLRP1Q9C000 1473 aa16.73■□□□□ 0.27
LCMT1-204ENST00000564011 TSPY4P0CV99 314 aa16.73■□□□□ 0.27
LCMT1-204ENST00000564011 TSPY10P0CW01 314 aa16.73■□□□□ 0.27
LCMT1-204ENST00000564011 CCDC141Q6ZP82 1450 aa16.72■□□□□ 0.27
LCMT1-204ENST00000564011 CEP162Q5TB80 1403 aa16.7■□□□□ 0.26
LCMT1-204ENST00000564011 TIAM1Q13009 1591 aa16.7■□□□□ 0.26
LCMT1-204ENST00000564011 NEURL4Q96JN8 1562 aa16.69■□□□□ 0.26
LCMT1-204ENST00000564011 UGGT1Q9NYU2 1555 aa16.69■□□□□ 0.26
LCMT1-204ENST00000564011 MBD5Q9P267 1494 aa16.69■□□□□ 0.26
LCMT1-204ENST00000564011 NPHP4O75161 1426 aaPredicted RBP16.68■□□□□ 0.26
LCMT1-204ENST00000564011 MIA2Q96PC5 1412 aa16.68■□□□□ 0.26
LCMT1-204ENST00000564011 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.67■□□□□ 0.26
LCMT1-204ENST00000564011 ZNF644Q9H582 1327 aaPredicted RBP16.67■□□□□ 0.26
LCMT1-204ENST00000564011 DEPDC5O75140 1603 aa16.67■□□□□ 0.26
LCMT1-204ENST00000564011 FBXO31Q5XUX0 539 aaPredicted RBP16.66■□□□□ 0.26
LCMT1-204ENST00000564011 MED14O60244 1454 aa16.65■□□□□ 0.26
LCMT1-204ENST00000564011 CAMSAP2Q08AD1 1489 aa16.64■□□□□ 0.25
LCMT1-204ENST00000564011 ZC3H13Q5T200 1668 aaKnown RBP16.63■□□□□ 0.25
LCMT1-204ENST00000564011 VWDEQ8N2E2 1590 aa16.63■□□□□ 0.25
LCMT1-204ENST00000564011 IQGAP1P46940 1657 aa16.62■□□□□ 0.25
LCMT1-204ENST00000564011 SYNMO15061 1565 aa16.61■□□□□ 0.25
LCMT1-204ENST00000564011 ARHGEF5Q12774 1597 aa16.61■□□□□ 0.25
LCMT1-204ENST00000564011 NCOA2Q15596 1464 aa16.6■□□□□ 0.25
LCMT1-204ENST00000564011 RNF17Q9BXT8 1623 aaKnown RBP16.59■□□□□ 0.25
LCMT1-204ENST00000564011 RGS17Q9UGC6 210 aaPredicted RBP16.58■□□□□ 0.24
LCMT1-204ENST00000564011 EID1Q9Y6B2 187 aa16.58■□□□□ 0.24
LCMT1-204ENST00000564011 EIF2AK4Q9P2K8 1649 aaKnown RBP16.56■□□□□ 0.24
LCMT1-204ENST00000564011 SENP3Q9H4L4 574 aaPredicted RBP16.55■□□□□ 0.24
LCMT1-204ENST00000564011 STRCP1A6NGW2 1772 aa16.54■□□□□ 0.24
LCMT1-204ENST00000564011 STAG3Q9UJ98 1225 aa16.53■□□□□ 0.24
LCMT1-204ENST00000564011 ABCC3O15438 1527 aa16.53■□□□□ 0.24
LCMT1-204ENST00000564011 LRRC7Q96NW7 1537 aa16.53■□□□□ 0.24
LCMT1-204ENST00000564011 SCAF11Q99590 1463 aaKnown RBP16.53■□□□□ 0.24
LCMT1-204ENST00000564011 MAST1Q9Y2H9 1570 aa16.52■□□□□ 0.24
LCMT1-204ENST00000564011 ERVK-7P63135 1459 aa16.52■□□□□ 0.23
LCMT1-204ENST00000564011 TXNDC2Q86VQ3 553 aa16.5■□□□□ 0.23
LCMT1-204ENST00000564011 KANK1Q14678 1352 aa16.49■□□□□ 0.23
LCMT1-204ENST00000564011 DUOX2Q9NRD8 1548 aa16.48■□□□□ 0.23
LCMT1-204ENST00000564011 MYOM3Q5VTT5 1437 aa16.47■□□□□ 0.23
LCMT1-204ENST00000564011 UBR1Q8IWV7 1749 aa16.47■□□□□ 0.23
LCMT1-204ENST00000564011 LRRC9Q6ZRR7 1453 aa16.45■□□□□ 0.22
LCMT1-204ENST00000564011 SLIT1O75093 1534 aa16.45■□□□□ 0.22
LCMT1-204ENST00000564011 ARHGAP31Q2M1Z3 1444 aa16.45■□□□□ 0.22
LCMT1-204ENST00000564011 ERBINQ96RT1 1412 aa16.44■□□□□ 0.22
LCMT1-204ENST00000564011 APLP2Q06481 763 aa16.43■□□□□ 0.22
LCMT1-204ENST00000564011 ARHGAP23Q9P227 1491 aa16.42■□□□□ 0.22
LCMT1-204ENST00000564011 CEP152O94986 1710 aa16.42■□□□□ 0.22
LCMT1-204ENST00000564011 POTEAQ6S8J7 498 aa16.42■□□□□ 0.22
LCMT1-204ENST00000564011 FAM135BQ49AJ0 1406 aa16.42■□□□□ 0.22
LCMT1-204ENST00000564011 VPS8Q8N3P4 1428 aa16.41■□□□□ 0.22
LCMT1-204ENST00000564011 HDGFP51858 240 aaKnown RBP16.4■□□□□ 0.22
LCMT1-204ENST00000564011 PRDM15P57071 1507 aaPredicted RBP16.4■□□□□ 0.22
LCMT1-204ENST00000564011 MAP3K1Q13233 1512 aa16.4■□□□□ 0.22
LCMT1-204ENST00000564011 SRCAPQ6ZRS2 3230 aa16.4■□□□□ 0.22
LCMT1-204ENST00000564011 KIF15Q9NS87 1388 aa16.39■□□□□ 0.21
LCMT1-204ENST00000564011 TMEM2Q9UHN6 1383 aa16.39■□□□□ 0.21
LCMT1-204ENST00000564011 BCANQ96GW7 911 aa16.39■□□□□ 0.21
LCMT1-204ENST00000564011 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.39■□□□□ 0.21
LCMT1-204ENST00000564011 KDM5AP29375 1690 aaKnown RBP16.39■□□□□ 0.21
LCMT1-204ENST00000564011 KCNA6P17658 529 aa16.38■□□□□ 0.21
LCMT1-204ENST00000564011 LTKP29376 864 aa16.38■□□□□ 0.21
LCMT1-204ENST00000564011 SETD1AO15047 1707 aaKnown RBP16.38■□□□□ 0.21
LCMT1-204ENST00000564011 XIRP1Q702N8 1843 aaKnown RBP16.38■□□□□ 0.21
LCMT1-204ENST00000564011 MROH1Q8NDA8 1641 aa16.37■□□□□ 0.21
LCMT1-204ENST00000564011 CFAP65Q6ZU64 1925 aaKnown RBP16.37■□□□□ 0.21
LCMT1-204ENST00000564011 EFCAB6Q5THR3 1501 aa16.37■□□□□ 0.21
LCMT1-204ENST00000564011 PROSER2Q86WR7 435 aaPredicted RBP16.37■□□□□ 0.21
LCMT1-204ENST00000564011 MSH6P52701 1360 aa16.36■□□□□ 0.21
LCMT1-204ENST00000564011 TMEM94Q12767 1356 aa16.36■□□□□ 0.21
LCMT1-204ENST00000564011 RRP7BPQ9NSQ0 103 aa16.35■□□□□ 0.21
LCMT1-204ENST00000564011 PIK3C2BO00750 1634 aa16.34■□□□□ 0.21
LCMT1-204ENST00000564011 ANKRD30AQ9BXX3 1397 aa16.34■□□□□ 0.21
LCMT1-204ENST00000564011 NKTRP30414 1462 aaKnown RBP16.34■□□□□ 0.21
LCMT1-204ENST00000564011 SLC52A1Q9NWF4 448 aa16.33■□□□□ 0.2
LCMT1-204ENST00000564011 CROCC2H7BZ55 1655 aa16.31■□□□□ 0.2
LCMT1-204ENST00000564011 PPP1R15AO75807 674 aaPredicted RBP16.31■□□□□ 0.2
LCMT1-204ENST00000564011 ROBO1Q9Y6N7 1651 aa16.3■□□□□ 0.2
LCMT1-204ENST00000564011 JCADQ9P266 1359 aa16.3■□□□□ 0.2
LCMT1-204ENST00000564011 LMTK2Q8IWU2 1503 aa16.29■□□□□ 0.2
LCMT1-204ENST00000564011 IDI1Q13907 227 aa16.29■□□□□ 0.2
LCMT1-204ENST00000564011 SLC26A8Q96RN1 970 aa16.29■□□□□ 0.2
LCMT1-204ENST00000564011 PTPN23Q9H3S7 1636 aa16.28■□□□□ 0.2
LCMT1-204ENST00000564011 C14orf37Q86TY3 774 aa16.28■□□□□ 0.2
LCMT1-204ENST00000564011 ABCC5O15440 1437 aa16.28■□□□□ 0.2
LCMT1-204ENST00000564011 DAPK1P53355 1430 aa16.28■□□□□ 0.2
LCMT1-204ENST00000564011 KANK4Q5T7N3 995 aaPredicted RBP16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms