RNA–Protein interactions for RNA: ENST00000563919.1

SCAPER-209, Transcript of S-phase cyclin A associated protein in the ER, humanhuman

TSL 4

Gene SCAPER, Length 641 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPER-209ENST00000563919 FBXO31Q5XUX0 539 aaPredicted RBP23.93■■□□□ 1.42
SCAPER-209ENST00000563919 CPS1P31327 1500 aa23.92■■□□□ 1.42
SCAPER-209ENST00000563919 TNRQ92752 1358 aa23.91■■□□□ 1.42
SCAPER-209ENST00000563919 SHANK2Q9UPX8 1470 aa23.91■■□□□ 1.42
SCAPER-209ENST00000563919 NEURL4Q96JN8 1562 aa23.91■■□□□ 1.42
SCAPER-209ENST00000563919 TIAM1Q13009 1591 aa23.9■■□□□ 1.42
SCAPER-209ENST00000563919 POLR1AO95602 1720 aaPredicted RBP23.9■■□□□ 1.42
SCAPER-209ENST00000563919 MED1Q15648 1581 aaPredicted RBP23.89■■□□□ 1.41
SCAPER-209ENST00000563919 KIF3BO15066 747 aa23.88■■□□□ 1.41
SCAPER-209ENST00000563919 ANKLE2Q86XL3 938 aa23.87■■□□□ 1.41
SCAPER-209ENST00000563919 PZPP20742 1482 aa23.87■■□□□ 1.41
SCAPER-209ENST00000563919 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.84■■□□□ 1.41
SCAPER-209ENST00000563919 THEMISQ8N1K5 641 aaPredicted RBP23.84■■□□□ 1.41
SCAPER-209ENST00000563919 WASHC2CQ9Y4E1 1318 aa23.84■■□□□ 1.41
SCAPER-209ENST00000563919 KDM5DQ9BY66 1539 aa23.83■■□□□ 1.41
SCAPER-209ENST00000563919 FAM135AQ9P2D6 1515 aa23.83■■□□□ 1.41
SCAPER-209ENST00000563919 VWDEQ8N2E2 1590 aa23.82■■□□□ 1.4
SCAPER-209ENST00000563919 CEP162Q5TB80 1403 aa23.82■■□□□ 1.4
SCAPER-209ENST00000563919 MIA2Q96PC5 1412 aa23.82■■□□□ 1.4
SCAPER-209ENST00000563919 EHBP1L1Q8N3D4 1523 aa23.81■■□□□ 1.4
SCAPER-209ENST00000563919 MED14O60244 1454 aa23.79■■□□□ 1.4
SCAPER-209ENST00000563919 NLRP1Q9C000 1473 aa23.79■■□□□ 1.4
SCAPER-209ENST00000563919 RSPH4AQ5TD94 716 aa23.78■■□□□ 1.4
SCAPER-209ENST00000563919 CCDC141Q6ZP82 1450 aa23.78■■□□□ 1.4
SCAPER-209ENST00000563919 ALKQ9UM73 1620 aa23.77■■□□□ 1.4
SCAPER-209ENST00000563919 NPHP4O75161 1426 aaPredicted RBP23.77■■□□□ 1.4
SCAPER-209ENST00000563919 UGGT1Q9NYU2 1555 aa23.77■■□□□ 1.4
SCAPER-209ENST00000563919 DEPDC5O75140 1603 aa23.77■■□□□ 1.4
SCAPER-209ENST00000563919 PHF23Q9BUL5 403 aaPredicted RBP23.73■■□□□ 1.39
SCAPER-209ENST00000563919 CAMSAP2Q08AD1 1489 aa23.73■■□□□ 1.39
SCAPER-209ENST00000563919 IQGAP1P46940 1657 aa23.7■■□□□ 1.38
SCAPER-209ENST00000563919 NCOA2Q15596 1464 aa23.69■■□□□ 1.38
SCAPER-209ENST00000563919 TSPY4P0CV99 314 aa23.69■■□□□ 1.38
SCAPER-209ENST00000563919 TSPY10P0CW01 314 aa23.69■■□□□ 1.38
SCAPER-209ENST00000563919 LRRC7Q96NW7 1537 aa23.68■■□□□ 1.38
SCAPER-209ENST00000563919 STRCP1A6NGW2 1772 aa23.68■■□□□ 1.38
SCAPER-209ENST00000563919 ARHGEF5Q12774 1597 aa23.65■■□□□ 1.38
SCAPER-209ENST00000563919 ABCC3O15438 1527 aa23.64■■□□□ 1.37
SCAPER-209ENST00000563919 SENP3Q9H4L4 574 aaPredicted RBP23.63■■□□□ 1.37
SCAPER-209ENST00000563919 RNF17Q9BXT8 1623 aaKnown RBP23.62■■□□□ 1.37
SCAPER-209ENST00000563919 ERVK-7P63135 1459 aa23.6■■□□□ 1.37
SCAPER-209ENST00000563919 SYNMO15061 1565 aa23.6■■□□□ 1.37
SCAPER-209ENST00000563919 ZC3H13Q5T200 1668 aaKnown RBP23.58■■□□□ 1.37
SCAPER-209ENST00000563919 RGS17Q9UGC6 210 aaPredicted RBP23.55■■□□□ 1.36
SCAPER-209ENST00000563919 CFAP65Q6ZU64 1925 aaKnown RBP23.55■■□□□ 1.36
SCAPER-209ENST00000563919 UBR1Q8IWV7 1749 aa23.54■■□□□ 1.36
SCAPER-209ENST00000563919 MAST1Q9Y2H9 1570 aa23.54■■□□□ 1.36
SCAPER-209ENST00000563919 LTKP29376 864 aa23.54■■□□□ 1.36
SCAPER-209ENST00000563919 SCAF11Q99590 1463 aaKnown RBP23.54■■□□□ 1.36
SCAPER-209ENST00000563919 MROH1Q8NDA8 1641 aa23.53■■□□□ 1.36
SCAPER-209ENST00000563919 EIF2AK4Q9P2K8 1649 aaKnown RBP23.53■■□□□ 1.36
SCAPER-209ENST00000563919 TXNDC2Q86VQ3 553 aa23.52■■□□□ 1.36
SCAPER-209ENST00000563919 ARHGAP23Q9P227 1491 aa23.5■■□□□ 1.35
SCAPER-209ENST00000563919 SLIT1O75093 1534 aa23.49■■□□□ 1.35
SCAPER-209ENST00000563919 CEP152O94986 1710 aa23.48■■□□□ 1.35
SCAPER-209ENST00000563919 XIRP1Q702N8 1843 aaKnown RBP23.47■■□□□ 1.35
SCAPER-209ENST00000563919 LRRC9Q6ZRR7 1453 aa23.47■■□□□ 1.35
SCAPER-209ENST00000563919 EID1Q9Y6B2 187 aa23.46■■□□□ 1.35
SCAPER-209ENST00000563919 DUOX2Q9NRD8 1548 aa23.44■■□□□ 1.34
SCAPER-209ENST00000563919 ARHGAP31Q2M1Z3 1444 aa23.44■■□□□ 1.34
SCAPER-209ENST00000563919 FAM135BQ49AJ0 1406 aa23.44■■□□□ 1.34
SCAPER-209ENST00000563919 MYOM3Q5VTT5 1437 aa23.41■■□□□ 1.34
SCAPER-209ENST00000563919 TMEM2Q9UHN6 1383 aa23.4■■□□□ 1.34
SCAPER-209ENST00000563919 KANK4Q5T7N3 995 aaPredicted RBP23.38■■□□□ 1.33
SCAPER-209ENST00000563919 POTEAQ6S8J7 498 aa23.38■■□□□ 1.33
SCAPER-209ENST00000563919 KIF15Q9NS87 1388 aa23.38■■□□□ 1.33
SCAPER-209ENST00000563919 PRDM15P57071 1507 aaPredicted RBP23.38■■□□□ 1.33
SCAPER-209ENST00000563919 TMEM94Q12767 1356 aa23.37■■□□□ 1.33
SCAPER-209ENST00000563919 PIK3C2BO00750 1634 aa23.36■■□□□ 1.33
SCAPER-209ENST00000563919 VPS8Q8N3P4 1428 aa23.35■■□□□ 1.33
SCAPER-209ENST00000563919 KCNA6P17658 529 aa23.35■■□□□ 1.33
SCAPER-209ENST00000563919 RRP7BPQ9NSQ0 103 aa23.35■■□□□ 1.33
SCAPER-209ENST00000563919 STAG3Q9UJ98 1225 aa23.35■■□□□ 1.33
SCAPER-209ENST00000563919 ERBINQ96RT1 1412 aa23.34■■□□□ 1.33
SCAPER-209ENST00000563919 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.34■■□□□ 1.334e-6■■■□□ 16.5
SCAPER-209ENST00000563919 IDI1Q13907 227 aa23.33■■□□□ 1.33
SCAPER-209ENST00000563919 MAP3K1Q13233 1512 aa23.32■■□□□ 1.32
SCAPER-209ENST00000563919 PROSER2Q86WR7 435 aaPredicted RBP23.31■■□□□ 1.32
SCAPER-209ENST00000563919 ABCC5O15440 1437 aa23.31■■□□□ 1.32
SCAPER-209ENST00000563919 EFCAB6Q5THR3 1501 aa23.3■■□□□ 1.32
SCAPER-209ENST00000563919 TET3O43151 1660 aa23.3■■□□□ 1.32
SCAPER-209ENST00000563919 KDM5AP29375 1690 aaKnown RBP23.3■■□□□ 1.32
SCAPER-209ENST00000563919 ROBO1Q9Y6N7 1651 aa23.3■■□□□ 1.32
SCAPER-209ENST00000563919 RBM33Q96EV2 1170 aaKnown RBP23.3■■□□□ 1.32
SCAPER-209ENST00000563919 SLC26A8Q96RN1 970 aa23.3■■□□□ 1.32
SCAPER-209ENST00000563919 KANK1Q14678 1352 aa23.28■■□□□ 1.32
SCAPER-209ENST00000563919 CROCC2H7BZ55 1655 aa23.25■■□□□ 1.31
SCAPER-209ENST00000563919 LMTK2Q8IWU2 1503 aa23.25■■□□□ 1.31
SCAPER-209ENST00000563919 SLAIN2Q9P270 581 aa23.23■■□□□ 1.31
SCAPER-209ENST00000563919 NKTRP30414 1462 aaKnown RBP23.22■■□□□ 1.31
SCAPER-209ENST00000563919 NOS1P29475 1434 aa23.21■■□□□ 1.31
SCAPER-209ENST00000563919 DAPK1P53355 1430 aa23.21■■□□□ 1.31
SCAPER-209ENST00000563919 NWD1Q149M9 1564 aa23.21■■□□□ 1.31
SCAPER-209ENST00000563919 SRCAPQ6ZRS2 3230 aa23.21■■□□□ 1.31
SCAPER-209ENST00000563919 PTPN23Q9H3S7 1636 aa23.2■■□□□ 1.3
SCAPER-209ENST00000563919 MSH6P52701 1360 aa23.2■■□□□ 1.3
SCAPER-209ENST00000563919 LOC105371045A0A1W2PR82 267 aa23.19■■□□□ 1.3
SCAPER-209ENST00000563919 SLC52A1Q9NWF4 448 aa23.19■■□□□ 1.3
SCAPER-209ENST00000563919 ADGRB3O60242 1522 aa23.18■■□□□ 1.3
SCAPER-209ENST00000563919 JCADQ9P266 1359 aa23.18■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms