RNA–Protein interactions for RNA: ENST00000563900.5

NSMCE1-206, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 493 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-206ENST00000563900 CNTLNQ9NXG0 1405 aa13.54□□□□□ -0.24
NSMCE1-206ENST00000563900 MROH2AA6NES4 1674 aa13.53□□□□□ -0.24
NSMCE1-206ENST00000563900 PPP6R1Q9UPN7 881 aa13.53□□□□□ -0.24
NSMCE1-206ENST00000563900 DEPDC5O75140 1603 aa13.51□□□□□ -0.25
NSMCE1-206ENST00000563900 KIF3BO15066 747 aa13.51□□□□□ -0.25
NSMCE1-206ENST00000563900 RRP7BPQ9NSQ0 103 aa13.51□□□□□ -0.25
NSMCE1-206ENST00000563900 CHIC2Q9UKJ5 165 aa13.51□□□□□ -0.25
NSMCE1-206ENST00000563900 PRDM15P57071 1507 aaPredicted RBP13.5□□□□□ -0.25
NSMCE1-206ENST00000563900 KDM5DQ9BY66 1539 aa13.5□□□□□ -0.25
NSMCE1-206ENST00000563900 GGT6Q6P531 493 aa13.5□□□□□ -0.25
NSMCE1-206ENST00000563900 C3P01024 1663 aa13.5□□□□□ -0.25
NSMCE1-206ENST00000563900 CLTCQ00610 1675 aaKnown RBP13.49□□□□□ -0.25
NSMCE1-206ENST00000563900 VWDEQ8N2E2 1590 aa13.48□□□□□ -0.25
NSMCE1-206ENST00000563900 ANKRD50Q9ULJ7 1429 aa13.47□□□□□ -0.25
NSMCE1-206ENST00000563900 ZMYM3Q14202 1370 aa13.47□□□□□ -0.25
NSMCE1-206ENST00000563900 ABCC3O15438 1527 aa13.47□□□□□ -0.25
NSMCE1-206ENST00000563900 ZC3H13Q5T200 1668 aaKnown RBP13.47□□□□□ -0.25
NSMCE1-206ENST00000563900 CEBPAP49715 358 aaPredicted RBP13.45□□□□□ -0.26
NSMCE1-206ENST00000563900 NPATQ14207 1427 aa13.45□□□□□ -0.26
NSMCE1-206ENST00000563900 LMTK3Q96Q04 1460 aa13.44□□□□□ -0.26
NSMCE1-206ENST00000563900 ESF1Q9H501 851 aaKnown RBP13.44□□□□□ -0.26
NSMCE1-206ENST00000563900 LMTK2Q8IWU2 1503 aa13.44□□□□□ -0.26
NSMCE1-206ENST00000563900 SETD1BQ9UPS6 1966 aaKnown RBP13.43□□□□□ -0.26
NSMCE1-206ENST00000563900 PZPP20742 1482 aa13.43□□□□□ -0.26
NSMCE1-206ENST00000563900 UNC13BO14795 1591 aa13.43□□□□□ -0.26
NSMCE1-206ENST00000563900 WASHC2CQ9Y4E1 1318 aa13.42□□□□□ -0.26
NSMCE1-206ENST00000563900 HFM1A2PYH4 1435 aa13.42□□□□□ -0.26
NSMCE1-206ENST00000563900 NAIPQ13075 1403 aa13.42□□□□□ -0.26
NSMCE1-206ENST00000563900 ITGAEP38570 1179 aa13.42□□□□□ -0.26
NSMCE1-206ENST00000563900 GCC2Q8IWJ2 1684 aa13.42□□□□□ -0.26
NSMCE1-206ENST00000563900 CEP152O94986 1710 aa13.42□□□□□ -0.26
NSMCE1-206ENST00000563900 PREX1Q8TCU6 1659 aa13.41□□□□□ -0.26
NSMCE1-206ENST00000563900 ARHGAP31Q2M1Z3 1444 aa13.41□□□□□ -0.26
NSMCE1-206ENST00000563900 CAMSAP1Q5T5Y3 1602 aa13.41□□□□□ -0.26
NSMCE1-206ENST00000563900 SPATA31D1Q6ZQQ2 1576 aa13.38□□□□□ -0.27
NSMCE1-206ENST00000563900 EFCAB6Q5THR3 1501 aa13.38□□□□□ -0.27
NSMCE1-206ENST00000563900 KANK1Q14678 1352 aa13.37□□□□□ -0.27
NSMCE1-206ENST00000563900 MYO3AQ8NEV4 1616 aa13.37□□□□□ -0.27
NSMCE1-206ENST00000563900 UHRF1BP1Q6BDS2 1440 aa13.37□□□□□ -0.27
NSMCE1-206ENST00000563900 ZNF142P52746 1687 aaPredicted RBP13.37□□□□□ -0.27
NSMCE1-206ENST00000563900 ERVK-7P63135 1459 aa13.36□□□□□ -0.27
NSMCE1-206ENST00000563900 IQGAP3Q86VI3 1631 aa13.36□□□□□ -0.27
NSMCE1-206ENST00000563900 TET3O43151 1660 aa13.35□□□□□ -0.27
NSMCE1-206ENST00000563900 FBXO31Q5XUX0 539 aaPredicted RBP13.35□□□□□ -0.27
NSMCE1-206ENST00000563900 TNRQ92752 1358 aa13.34□□□□□ -0.27
NSMCE1-206ENST00000563900 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.34□□□□□ -0.27
NSMCE1-206ENST00000563900 RPRD2Q5VT52 1461 aaKnown RBP13.33□□□□□ -0.28
NSMCE1-206ENST00000563900 CEP170BQ9Y4F5 1589 aaPredicted RBP13.32□□□□□ -0.28
NSMCE1-206ENST00000563900 NOS1P29475 1434 aa13.32□□□□□ -0.28
NSMCE1-206ENST00000563900 A2ML1A8K2U0 1454 aa13.32□□□□□ -0.28
NSMCE1-206ENST00000563900 NLRP1Q9C000 1473 aa13.32□□□□□ -0.28
NSMCE1-206ENST00000563900 NUP155O75694 1391 aa13.31□□□□□ -0.28
NSMCE1-206ENST00000563900 HSPA2P54652 639 aa13.3□□□□□ -0.28
NSMCE1-206ENST00000563900 E9PCH4 1651 aa13.3□□□□□ -0.28
NSMCE1-206ENST00000563900 SYNMO15061 1565 aa13.29□□□□□ -0.28
NSMCE1-206ENST00000563900 PLA2R1Q13018 1463 aa13.28□□□□□ -0.28
NSMCE1-206ENST00000563900 CFAP65Q6ZU64 1925 aaKnown RBP13.27□□□□□ -0.28
NSMCE1-206ENST00000563900 STRCQ7RTU9 1775 aa13.27□□□□□ -0.29
NSMCE1-206ENST00000563900 SETD5Q9C0A6 1442 aa13.26□□□□□ -0.29
NSMCE1-206ENST00000563900 UGGT1Q9NYU2 1555 aa13.25□□□□□ -0.29
NSMCE1-206ENST00000563900 KDM5AP29375 1690 aaKnown RBP13.24□□□□□ -0.29
NSMCE1-206ENST00000563900 PIK3C2BO00750 1634 aa13.24□□□□□ -0.29
NSMCE1-206ENST00000563900 PTPRTO14522 1441 aa13.24□□□□□ -0.29
NSMCE1-206ENST00000563900 UBR1Q8IWV7 1749 aa13.24□□□□□ -0.29
NSMCE1-206ENST00000563900 RAB3GAP2Q9H2M9 1393 aa13.23□□□□□ -0.29
NSMCE1-206ENST00000563900 ACIN1Q9UKV3 1341 aaKnown RBP13.21□□□□□ -0.29
NSMCE1-206ENST00000563900 IDI1Q13907 227 aa13.21□□□□□ -0.29
NSMCE1-206ENST00000563900 SLC52A1Q9NWF4 448 aa13.21□□□□□ -0.29
NSMCE1-206ENST00000563900 ADGRB3O60242 1522 aa13.21□□□□□ -0.29
NSMCE1-206ENST00000563900 SPHKAPQ2M3C7 1700 aa13.21□□□□□ -0.3
NSMCE1-206ENST00000563900 ARHGAP23Q9P227 1491 aa13.21□□□□□ -0.3
NSMCE1-206ENST00000563900 SLIT1O75093 1534 aa13.2□□□□□ -0.3
NSMCE1-206ENST00000563900 NEURL4Q96JN8 1562 aa13.2□□□□□ -0.3
NSMCE1-206ENST00000563900 TRPM2O94759 1503 aa13.19□□□□□ -0.3
NSMCE1-206ENST00000563900 HRCP23327 699 aa13.19□□□□□ -0.3
NSMCE1-206ENST00000563900 THEMISQ8N1K5 641 aaPredicted RBP13.19□□□□□ -0.3
NSMCE1-206ENST00000563900 TRIM52Q96A61 297 aa13.18□□□□□ -0.3
NSMCE1-206ENST00000563900 POLR1AO95602 1720 aaPredicted RBP13.18□□□□□ -0.3
NSMCE1-206ENST00000563900 TMEM131LA2VDJ0 1609 aa13.17□□□□□ -0.3
NSMCE1-206ENST00000563900 MED14O60244 1454 aa13.17□□□□□ -0.3
NSMCE1-206ENST00000563900 PKD2Q13563 968 aa13.17□□□□□ -0.3
NSMCE1-206ENST00000563900 SLC4A1APQ9BWU0 796 aaKnown RBP13.17□□□□□ -0.3
NSMCE1-206ENST00000563900 TMEM2Q9UHN6 1383 aa13.16□□□□□ -0.3
NSMCE1-206ENST00000563900 NCKAP5LQ9HCH0 1330 aa13.15□□□□□ -0.3
NSMCE1-206ENST00000563900 CLTCL1P53675 1640 aa13.15□□□□□ -0.3
NSMCE1-206ENST00000563900 MPHOSPH9Q99550 1183 aa13.15□□□□□ -0.3
NSMCE1-206ENST00000563900 ZFYVE9O95405 1425 aa13.14□□□□□ -0.31
NSMCE1-206ENST00000563900 DMRT2Q9Y5R5 561 aa13.14□□□□□ -0.31
NSMCE1-206ENST00000563900 SCAF11Q99590 1463 aaKnown RBP13.14□□□□□ -0.31
NSMCE1-206ENST00000563900 MYO5BQ9ULV0 1848 aa13.13□□□□□ -0.31
NSMCE1-206ENST00000563900 ANKLE2Q86XL3 938 aa13.13□□□□□ -0.31
NSMCE1-206ENST00000563900 LTKP29376 864 aa13.12□□□□□ -0.31
NSMCE1-206ENST00000563900 NPHP4O75161 1426 aaPredicted RBP13.12□□□□□ -0.31
NSMCE1-206ENST00000563900 IQGAP1P46940 1657 aa13.11□□□□□ -0.31
NSMCE1-206ENST00000563900 TRIM26Q12899 539 aaPredicted RBP13.1□□□□□ -0.31
NSMCE1-206ENST00000563900 FOXD1Q16676 465 aa13.1□□□□□ -0.31
NSMCE1-206ENST00000563900 STAG3Q9UJ98 1225 aa13.09□□□□□ -0.31
NSMCE1-206ENST00000563900 RIMS2Q9UQ26 1411 aa13.09□□□□□ -0.31
NSMCE1-206ENST00000563900 TXNDC2Q86VQ3 553 aa13.08□□□□□ -0.32
NSMCE1-206ENST00000563900 LTBP4Q8N2S1 1624 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms