RNA–Protein interactions for RNA: ENST00000563672.5

CMTM3-206, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 4

Gene CMTM3, Length 460 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-206ENST00000563672 MROH2AA6NES4 1674 aa31.13■■■□□ 2.57
CMTM3-206ENST00000563672 ADGRL2O95490 1459 aa31.12■■■□□ 2.57
CMTM3-206ENST00000563672 CLTCQ00610 1675 aaKnown RBP31.1■■■□□ 2.57
CMTM3-206ENST00000563672 EIF2AK4Q9P2K8 1649 aaKnown RBP31.1■■■□□ 2.57
CMTM3-206ENST00000563672 PTPRKQ15262 1439 aa31.1■■■□□ 2.57
CMTM3-206ENST00000563672 ERBINQ96RT1 1412 aa31.09■■■□□ 2.57
CMTM3-206ENST00000563672 FAM135AQ9P2D6 1515 aa31.08■■■□□ 2.57
CMTM3-206ENST00000563672 WASHC2CQ9Y4E1 1318 aa31.07■■■□□ 2.56
CMTM3-206ENST00000563672 RNF17Q9BXT8 1623 aaKnown RBP31.07■■■□□ 2.56
CMTM3-206ENST00000563672 RRBP1Q9P2E9 1410 aaKnown RBP31.06■■■□□ 2.56
CMTM3-206ENST00000563672 KDM5DQ9BY66 1539 aa31.05■■■□□ 2.56
CMTM3-206ENST00000563672 NPATQ14207 1427 aa31.05■■■□□ 2.56
CMTM3-206ENST00000563672 SETD1BQ9UPS6 1966 aaKnown RBP31.03■■■□□ 2.56
CMTM3-206ENST00000563672 MROH1Q8NDA8 1641 aa31.01■■■□□ 2.55
CMTM3-206ENST00000563672 HSPA2P54652 639 aa30.99■■■□□ 2.55
CMTM3-206ENST00000563672 ROCK1Q13464 1354 aa30.99■■■□□ 2.55
CMTM3-206ENST00000563672 PREX1Q8TCU6 1659 aa30.99■■■□□ 2.55
CMTM3-206ENST00000563672 UHRF1BP1Q6BDS2 1440 aa30.98■■■□□ 2.55
CMTM3-206ENST00000563672 ITGAEP38570 1179 aa30.96■■■□□ 2.55
CMTM3-206ENST00000563672 ABCC3O15438 1527 aa30.96■■■□□ 2.55
CMTM3-206ENST00000563672 ANKRD50Q9ULJ7 1429 aa30.94■■■□□ 2.54
CMTM3-206ENST00000563672 PZPP20742 1482 aa30.94■■■□□ 2.54
CMTM3-206ENST00000563672 PRDM15P57071 1507 aaPredicted RBP30.93■■■□□ 2.54
CMTM3-206ENST00000563672 FBXO31Q5XUX0 539 aaPredicted RBP30.93■■■□□ 2.54
CMTM3-206ENST00000563672 DEPDC5O75140 1603 aa30.91■■■□□ 2.54
CMTM3-206ENST00000563672 GRWD1Q9BQ67 446 aaKnown RBP eCLIP30.9■■■□□ 2.54
CMTM3-206ENST00000563672 ZC3H13Q5T200 1668 aaKnown RBP30.9■■■□□ 2.54
CMTM3-206ENST00000563672 KANK1Q14678 1352 aa30.86■■■□□ 2.53
CMTM3-206ENST00000563672 TNRQ92752 1358 aa30.84■■■□□ 2.53
CMTM3-206ENST00000563672 VWDEQ8N2E2 1590 aa30.83■■■□□ 2.53
CMTM3-206ENST00000563672 ARHGAP31Q2M1Z3 1444 aa30.81■■■□□ 2.52
CMTM3-206ENST00000563672 CEP152O94986 1710 aa30.81■■■□□ 2.52
CMTM3-206ENST00000563672 LMTK2Q8IWU2 1503 aa30.8■■■□□ 2.52
CMTM3-206ENST00000563672 CAMSAP1Q5T5Y3 1602 aa30.8■■■□□ 2.52
CMTM3-206ENST00000563672 MYO3AQ8NEV4 1616 aa30.79■■■□□ 2.52
CMTM3-206ENST00000563672 ERVK-7P63135 1459 aa30.76■■■□□ 2.51
CMTM3-206ENST00000563672 SPATA31D1Q6ZQQ2 1576 aa30.75■■■□□ 2.51
CMTM3-206ENST00000563672 A2ML1A8K2U0 1454 aa30.75■■■□□ 2.51
CMTM3-206ENST00000563672 CEP170BQ9Y4F5 1589 aaPredicted RBP30.75■■■□□ 2.51
CMTM3-206ENST00000563672 ZNF142P52746 1687 aaPredicted RBP30.74■■■□□ 2.51
CMTM3-206ENST00000563672 NLRP1Q9C000 1473 aa30.71■■■□□ 2.51
CMTM3-206ENST00000563672 UNC13BO14795 1591 aa30.71■■■□□ 2.51
CMTM3-206ENST00000563672 NAIPQ13075 1403 aa30.69■■■□□ 2.5
CMTM3-206ENST00000563672 STRCQ7RTU9 1775 aa30.68■■■□□ 2.5
CMTM3-206ENST00000563672 DMRT2Q9Y5R5 561 aa30.66■■■□□ 2.5
CMTM3-206ENST00000563672 EFCAB6Q5THR3 1501 aa30.66■■■□□ 2.5
CMTM3-206ENST00000563672 HFM1A2PYH4 1435 aa30.64■■■□□ 2.5
CMTM3-206ENST00000563672 PLA2R1Q13018 1463 aa30.64■■■□□ 2.5
CMTM3-206ENST00000563672 NUP155O75694 1391 aa30.64■■■□□ 2.5
CMTM3-206ENST00000563672 THEMISQ8N1K5 641 aaPredicted RBP30.61■■■□□ 2.49
CMTM3-206ENST00000563672 CFAP65Q6ZU64 1925 aaKnown RBP30.61■■■□□ 2.49
CMTM3-206ENST00000563672 NOS1P29475 1434 aa30.6■■■□□ 2.49
CMTM3-206ENST00000563672 RPRD2Q5VT52 1461 aaKnown RBP30.59■■■□□ 2.49
CMTM3-206ENST00000563672 PTPRTO14522 1441 aa30.59■■■□□ 2.49
CMTM3-206ENST00000563672 NCKAP5LQ9HCH0 1330 aa30.59■■■□□ 2.49
CMTM3-206ENST00000563672 TET3O43151 1660 aa30.58■■■□□ 2.49
CMTM3-206ENST00000563672 IQGAP3Q86VI3 1631 aa30.58■■■□□ 2.49
CMTM3-206ENST00000563672 UGGT1Q9NYU2 1555 aa30.58■■■□□ 2.49
CMTM3-206ENST00000563672 PKD2Q13563 968 aa30.58■■■□□ 2.49
CMTM3-206ENST00000563672 GCC2Q8IWJ2 1684 aa30.57■■■□□ 2.48
CMTM3-206ENST00000563672 IDI1Q13907 227 aa30.53■■■□□ 2.48
CMTM3-206ENST00000563672 SYNMO15061 1565 aa30.52■■■□□ 2.48
CMTM3-206ENST00000563672 SLC52A1Q9NWF4 448 aa30.5■■■□□ 2.47
CMTM3-206ENST00000563672 ANKLE2Q86XL3 938 aa30.49■■■□□ 2.47
CMTM3-206ENST00000563672 E9PCH4 1651 aa30.46■■■□□ 2.47
CMTM3-206ENST00000563672 UBR1Q8IWV7 1749 aa30.45■■■□□ 2.47
CMTM3-206ENST00000563672 PIK3C2BO00750 1634 aa30.44■■■□□ 2.46
CMTM3-206ENST00000563672 TRIM52Q96A61 297 aa30.42■■■□□ 2.46
CMTM3-206ENST00000563672 STAG3Q9UJ98 1225 aa30.41■■■□□ 2.46
CMTM3-206ENST00000563672 NEURL4Q96JN8 1562 aa30.41■■■□□ 2.46
CMTM3-206ENST00000563672 ARHGAP23Q9P227 1491 aa30.4■■■□□ 2.46
CMTM3-206ENST00000563672 MED14O60244 1454 aa30.38■■■□□ 2.45
CMTM3-206ENST00000563672 SLIT1O75093 1534 aa30.38■■■□□ 2.45
CMTM3-206ENST00000563672 KDM5AP29375 1690 aaKnown RBP30.37■■■□□ 2.45
CMTM3-206ENST00000563672 TMEM2Q9UHN6 1383 aa30.37■■■□□ 2.45
CMTM3-206ENST00000563672 POLR1AO95602 1720 aaPredicted RBP30.36■■■□□ 2.45
CMTM3-206ENST00000563672 LTKP29376 864 aa30.35■■■□□ 2.45
CMTM3-206ENST00000563672 SETD5Q9C0A6 1442 aa30.35■■■□□ 2.45
CMTM3-206ENST00000563672 ADGRB3O60242 1522 aa30.34■■■□□ 2.45
CMTM3-206ENST00000563672 NPHP4O75161 1426 aaPredicted RBP30.34■■■□□ 2.45
CMTM3-206ENST00000563672 TXNDC2Q86VQ3 553 aa30.34■■■□□ 2.45
CMTM3-206ENST00000563672 SLC4A1APQ9BWU0 796 aaKnown RBP30.32■■■□□ 2.44
CMTM3-206ENST00000563672 SCAF11Q99590 1463 aaKnown RBP30.31■■■□□ 2.44
CMTM3-206ENST00000563672 CERKQ8TCT0 537 aa30.31■■■□□ 2.44
CMTM3-206ENST00000563672 EID1Q9Y6B2 187 aa30.31■■■□□ 2.44
CMTM3-206ENST00000563672 ACIN1Q9UKV3 1341 aaKnown RBP30.29■■■□□ 2.44
CMTM3-206ENST00000563672 ZNF335Q9H4Z2 1342 aaPredicted RBP30.28■■■□□ 2.44
CMTM3-206ENST00000563672 LTBP4Q8N2S1 1624 aa30.28■■■□□ 2.44
CMTM3-206ENST00000563672 TMEM131LA2VDJ0 1609 aa30.26■■■□□ 2.44
CMTM3-206ENST00000563672 RAB3GAP2Q9H2M9 1393 aa30.24■■■□□ 2.43
CMTM3-206ENST00000563672 SPHKAPQ2M3C7 1700 aa30.24■■■□□ 2.43
CMTM3-206ENST00000563672 CHGAP10645 457 aaKnown RBP30.23■■■□□ 2.43
CMTM3-206ENST00000563672 IQGAP1P46940 1657 aa30.23■■■□□ 2.43
CMTM3-206ENST00000563672 MPHOSPH9Q99550 1183 aa30.22■■■□□ 2.43
CMTM3-206ENST00000563672 ZFYVE9O95405 1425 aa30.22■■■□□ 2.43
CMTM3-206ENST00000563672 TRPM2O94759 1503 aa30.21■■■□□ 2.43
CMTM3-206ENST00000563672 RIMS2Q9UQ26 1411 aa30.19■■■□□ 2.42
CMTM3-206ENST00000563672 HDGFP51858 240 aaKnown RBP30.18■■■□□ 2.42
CMTM3-206ENST00000563672 ILDR1Q86SU0 546 aaPredicted RBP30.17■■■□□ 2.42
CMTM3-206ENST00000563672 FBXO41Q8TF61 875 aa30.17■■■□□ 2.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms