RNA–Protein interactions for RNA: ENST00000562610.5

COMMD4-206, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 850 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-206ENST00000562610 KIF15Q9NS87 1388 aa24.87■■□□□ 1.57
COMMD4-206ENST00000562610 ZC3H13Q5T200 1668 aaKnown RBP24.87■■□□□ 1.57
COMMD4-206ENST00000562610 CEP152O94986 1710 aa24.86■■□□□ 1.57
COMMD4-206ENST00000562610 MROH1Q8NDA8 1641 aa24.83■■□□□ 1.57
COMMD4-206ENST00000562610 CHIC2Q9UKJ5 165 aa24.83■■□□□ 1.57
COMMD4-206ENST00000562610 ZMYM3Q14202 1370 aa24.82■■□□□ 1.56
COMMD4-206ENST00000562610 ERBINQ96RT1 1412 aa24.82■■□□□ 1.56
COMMD4-206ENST00000562610 ANKRD30AQ9BXX3 1397 aa24.81■■□□□ 1.56
COMMD4-206ENST00000562610 UHRF1BP1Q6BDS2 1440 aa24.81■■□□□ 1.56
COMMD4-206ENST00000562610 RRP7BPQ9NSQ0 103 aa24.81■■□□□ 1.56
COMMD4-206ENST00000562610 PPP6R1Q9UPN7 881 aa24.81■■□□□ 1.56
COMMD4-206ENST00000562610 MYO3AQ8NEV4 1616 aa24.81■■□□□ 1.56
COMMD4-206ENST00000562610 ADGRL2O95490 1459 aa24.81■■□□□ 1.56
COMMD4-206ENST00000562610 DEPDC5O75140 1603 aa24.79■■□□□ 1.56
COMMD4-206ENST00000562610 CAMSAP1Q5T5Y3 1602 aa24.78■■□□□ 1.56
COMMD4-206ENST00000562610 NPATQ14207 1427 aa24.78■■□□□ 1.56
COMMD4-206ENST00000562610 PRDM15P57071 1507 aaPredicted RBP24.77■■□□□ 1.56
COMMD4-206ENST00000562610 NCOA1Q15788 1441 aa24.77■■□□□ 1.56
COMMD4-206ENST00000562610 ABCC3O15438 1527 aa24.76■■□□□ 1.55
COMMD4-206ENST00000562610 ZNF142P52746 1687 aaPredicted RBP24.76■■□□□ 1.55
COMMD4-206ENST00000562610 HSPA2P54652 639 aa24.76■■□□□ 1.55
COMMD4-206ENST00000562610 WASHC2CQ9Y4E1 1318 aa24.75■■□□□ 1.55
COMMD4-206ENST00000562610 PTPRKQ15262 1439 aa24.74■■□□□ 1.55
COMMD4-206ENST00000562610 CFAP65Q6ZU64 1925 aaKnown RBP24.73■■□□□ 1.55
COMMD4-206ENST00000562610 PZPP20742 1482 aa24.72■■□□□ 1.55
COMMD4-206ENST00000562610 CEP170BQ9Y4F5 1589 aaPredicted RBP24.7■■□□□ 1.54
COMMD4-206ENST00000562610 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.69■■□□□ 1.54
COMMD4-206ENST00000562610 RRBP1Q9P2E9 1410 aaKnown RBP24.69■■□□□ 1.54
COMMD4-206ENST00000562610 ITGAEP38570 1179 aa24.68■■□□□ 1.54
COMMD4-206ENST00000562610 STRCQ7RTU9 1775 aa24.67■■□□□ 1.54
COMMD4-206ENST00000562610 ANKRD50Q9ULJ7 1429 aa24.65■■□□□ 1.54
COMMD4-206ENST00000562610 KANK1Q14678 1352 aa24.64■■□□□ 1.53
COMMD4-206ENST00000562610 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.63■■□□□ 1.53
COMMD4-206ENST00000562610 ROCK1Q13464 1354 aa24.63■■□□□ 1.53
COMMD4-206ENST00000562610 TNRQ92752 1358 aa24.62■■□□□ 1.53
COMMD4-206ENST00000562610 UNC13BO14795 1591 aa24.62■■□□□ 1.53
COMMD4-206ENST00000562610 VWDEQ8N2E2 1590 aa24.62■■□□□ 1.53
COMMD4-206ENST00000562610 FBXO31Q5XUX0 539 aaPredicted RBP24.61■■□□□ 1.53
COMMD4-206ENST00000562610 SPATA31D1Q6ZQQ2 1576 aa24.61■■□□□ 1.53
COMMD4-206ENST00000562610 GCC2Q8IWJ2 1684 aa24.59■■□□□ 1.53
COMMD4-206ENST00000562610 A2ML1A8K2U0 1454 aa24.58■■□□□ 1.53
COMMD4-206ENST00000562610 ERVK-7P63135 1459 aa24.58■■□□□ 1.53
COMMD4-206ENST00000562610 LMTK2Q8IWU2 1503 aa24.57■■□□□ 1.52
COMMD4-206ENST00000562610 EFCAB6Q5THR3 1501 aa24.56■■□□□ 1.52
COMMD4-206ENST00000562610 POLR1AO95602 1720 aaPredicted RBP24.56■■□□□ 1.52
COMMD4-206ENST00000562610 TET3O43151 1660 aa24.56■■□□□ 1.52
COMMD4-206ENST00000562610 NLRP1Q9C000 1473 aa24.54■■□□□ 1.52
COMMD4-206ENST00000562610 ARHGAP31Q2M1Z3 1444 aa24.53■■□□□ 1.52
COMMD4-206ENST00000562610 IQGAP3Q86VI3 1631 aa24.52■■□□□ 1.52
COMMD4-206ENST00000562610 UGGT1Q9NYU2 1555 aa24.5■■□□□ 1.51
COMMD4-206ENST00000562610 PLA2R1Q13018 1463 aa24.5■■□□□ 1.51
COMMD4-206ENST00000562610 UBR1Q8IWV7 1749 aa24.49■■□□□ 1.51
COMMD4-206ENST00000562610 E9PCH4 1651 aa24.46■■□□□ 1.51
COMMD4-206ENST00000562610 PIK3C2BO00750 1634 aa24.45■■□□□ 1.5
COMMD4-206ENST00000562610 SYNMO15061 1565 aa24.45■■□□□ 1.5
COMMD4-206ENST00000562610 DMRT2Q9Y5R5 561 aa24.43■■□□□ 1.5
COMMD4-206ENST00000562610 RPRD2Q5VT52 1461 aaKnown RBP24.42■■□□□ 1.5
COMMD4-206ENST00000562610 PTPRTO14522 1441 aa24.42■■□□□ 1.5
COMMD4-206ENST00000562610 NAIPQ13075 1403 aa24.42■■□□□ 1.5
COMMD4-206ENST00000562610 NCKAP5LQ9HCH0 1330 aa24.4■■□□□ 1.5
COMMD4-206ENST00000562610 NEURL4Q96JN8 1562 aa24.39■■□□□ 1.5
COMMD4-206ENST00000562610 KDM5AP29375 1690 aaKnown RBP24.39■■□□□ 1.49
COMMD4-206ENST00000562610 HFM1A2PYH4 1435 aa24.38■■□□□ 1.49
COMMD4-206ENST00000562610 NUP155O75694 1391 aa24.38■■□□□ 1.49
COMMD4-206ENST00000562610 MYO5BQ9ULV0 1848 aa24.37■■□□□ 1.49
COMMD4-206ENST00000562610 NOS1P29475 1434 aa24.36■■□□□ 1.49
COMMD4-206ENST00000562610 PKD2Q13563 968 aa24.36■■□□□ 1.49
COMMD4-206ENST00000562610 THEMISQ8N1K5 641 aaPredicted RBP24.36■■□□□ 1.49
COMMD4-206ENST00000562610 SPHKAPQ2M3C7 1700 aa24.35■■□□□ 1.49
COMMD4-206ENST00000562610 IQGAP1P46940 1657 aa24.34■■□□□ 1.49
COMMD4-206ENST00000562610 ADGRB3O60242 1522 aa24.33■■□□□ 1.49
COMMD4-206ENST00000562610 ANKLE2Q86XL3 938 aa24.28■■□□□ 1.48
COMMD4-206ENST00000562610 STAG3Q9UJ98 1225 aa24.28■■□□□ 1.48
COMMD4-206ENST00000562610 SLIT1O75093 1534 aa24.28■■□□□ 1.48
COMMD4-206ENST00000562610 ARHGAP23Q9P227 1491 aa24.26■■□□□ 1.47
COMMD4-206ENST00000562610 IDI1Q13907 227 aa24.25■■□□□ 1.47
COMMD4-206ENST00000562610 NPHP4O75161 1426 aaPredicted RBP24.25■■□□□ 1.47
COMMD4-206ENST00000562610 MED14O60244 1454 aa24.25■■□□□ 1.47
COMMD4-206ENST00000562610 SCAF11Q99590 1463 aaKnown RBP24.25■■□□□ 1.47
COMMD4-206ENST00000562610 LTBP4Q8N2S1 1624 aa24.24■■□□□ 1.47
COMMD4-206ENST00000562610 TMEM131LA2VDJ0 1609 aa24.24■■□□□ 1.47
COMMD4-206ENST00000562610 TRIM52Q96A61 297 aa24.22■■□□□ 1.47
COMMD4-206ENST00000562610 SLC52A1Q9NWF4 448 aa24.22■■□□□ 1.47
COMMD4-206ENST00000562610 TMEM2Q9UHN6 1383 aa24.19■■□□□ 1.46
COMMD4-206ENST00000562610 ZNF335Q9H4Z2 1342 aaPredicted RBP24.19■■□□□ 1.46
COMMD4-206ENST00000562610 CERKQ8TCT0 537 aa24.19■■□□□ 1.46
COMMD4-206ENST00000562610 KIF1BO60333 1816 aa24.18■■□□□ 1.46
COMMD4-206ENST00000562610 CLTCL1P53675 1640 aa24.17■■□□□ 1.46
COMMD4-206ENST00000562610 TRPM2O94759 1503 aa24.16■■□□□ 1.46
COMMD4-206ENST00000562610 EID1Q9Y6B2 187 aa24.16■■□□□ 1.46
COMMD4-206ENST00000562610 ILDR1Q86SU0 546 aaPredicted RBP24.15■■□□□ 1.46
COMMD4-206ENST00000562610 TXNDC2Q86VQ3 553 aa24.15■■□□□ 1.46
COMMD4-206ENST00000562610 CHGAP10645 457 aaKnown RBP24.14■■□□□ 1.45
COMMD4-206ENST00000562610 STRCP1A6NGW2 1772 aa24.14■■□□□ 1.45
COMMD4-206ENST00000562610 LTKP29376 864 aa24.13■■□□□ 1.45
COMMD4-206ENST00000562610 SETD5Q9C0A6 1442 aa24.11■■□□□ 1.45
COMMD4-206ENST00000562610 FBXO41Q8TF61 875 aa24.11■■□□□ 1.45
COMMD4-206ENST00000562610 SLC4A1APQ9BWU0 796 aaKnown RBP24.11■■□□□ 1.45
COMMD4-206ENST00000562610 CPS1P31327 1500 aa24.1■■□□□ 1.45
COMMD4-206ENST00000562610 IQSEC2Q5JU85 1478 aa24.09■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms