RNA–Protein interactions for RNA: ENST00000562411.5

SNAPC5-204, Transcript of small nuclear RNA activating complex polypeptide 5, humanhuman

TSL 3

Gene SNAPC5, Length 587 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC5-204ENST00000562411 ERBINQ96RT1 1412 aa16.86■□□□□ 0.29
SNAPC5-204ENST00000562411 DEPDC5O75140 1603 aa16.85■□□□□ 0.29
SNAPC5-204ENST00000562411 LMTK3Q96Q04 1460 aa16.85■□□□□ 0.29
SNAPC5-204ENST00000562411 PRDM15P57071 1507 aaPredicted RBP16.85■□□□□ 0.29
SNAPC5-204ENST00000562411 GGT6Q6P531 493 aa16.84■□□□□ 0.29
SNAPC5-204ENST00000562411 ANKRD30AQ9BXX3 1397 aa16.84■□□□□ 0.29
SNAPC5-204ENST00000562411 KIF3BO15066 747 aa16.83■□□□□ 0.28
SNAPC5-204ENST00000562411 CHIC2Q9UKJ5 165 aa16.83■□□□□ 0.28
SNAPC5-204ENST00000562411 CAMSAP1Q5T5Y3 1602 aa16.82■□□□□ 0.28
SNAPC5-204ENST00000562411 MYO3AQ8NEV4 1616 aa16.82■□□□□ 0.28
SNAPC5-204ENST00000562411 RRBP1Q9P2E9 1410 aaKnown RBP16.82■□□□□ 0.28
SNAPC5-204ENST00000562411 ABCC3O15438 1527 aa16.81■□□□□ 0.28
SNAPC5-204ENST00000562411 CEBPAP49715 358 aaPredicted RBP16.81■□□□□ 0.28
SNAPC5-204ENST00000562411 PTPRKQ15262 1439 aa16.8■□□□□ 0.28
SNAPC5-204ENST00000562411 RRP7BPQ9NSQ0 103 aa16.8■□□□□ 0.28
SNAPC5-204ENST00000562411 NCOA1Q15788 1441 aa16.79■□□□□ 0.28
SNAPC5-204ENST00000562411 ZNF142P52746 1687 aaPredicted RBP16.78■□□□□ 0.28
SNAPC5-204ENST00000562411 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.78■□□□□ 0.28
SNAPC5-204ENST00000562411 GCC2Q8IWJ2 1684 aa16.77■□□□□ 0.28
SNAPC5-204ENST00000562411 UHRF1BP1Q6BDS2 1440 aa16.77■□□□□ 0.27
SNAPC5-204ENST00000562411 PZPP20742 1482 aa16.76■□□□□ 0.27
SNAPC5-204ENST00000562411 NPATQ14207 1427 aa16.76■□□□□ 0.27
SNAPC5-204ENST00000562411 UNC13BO14795 1591 aa16.76■□□□□ 0.27
SNAPC5-204ENST00000562411 ZMYM3Q14202 1370 aa16.76■□□□□ 0.27
SNAPC5-204ENST00000562411 ITGAEP38570 1179 aa16.75■□□□□ 0.27
SNAPC5-204ENST00000562411 ROCK1Q13464 1354 aa16.74■□□□□ 0.27
SNAPC5-204ENST00000562411 ANKRD50Q9ULJ7 1429 aa16.73■□□□□ 0.27
SNAPC5-204ENST00000562411 ILDR1Q86SU0 546 aaPredicted RBP16.73■□□□□ 0.27
SNAPC5-204ENST00000562411 PPP6R1Q9UPN7 881 aa16.73■□□□□ 0.27
SNAPC5-204ENST00000562411 VWDEQ8N2E2 1590 aa16.72■□□□□ 0.27
SNAPC5-204ENST00000562411 CEP170BQ9Y4F5 1589 aaPredicted RBP16.72■□□□□ 0.27
SNAPC5-204ENST00000562411 WASHC2CQ9Y4E1 1318 aa16.72■□□□□ 0.27
SNAPC5-204ENST00000562411 SETD1BQ9UPS6 1966 aaKnown RBP16.71■□□□□ 0.27
SNAPC5-204ENST00000562411 EFCAB6Q5THR3 1501 aa16.7■□□□□ 0.26
SNAPC5-204ENST00000562411 KANK1Q14678 1352 aa16.69■□□□□ 0.26
SNAPC5-204ENST00000562411 SPATA31D1Q6ZQQ2 1576 aa16.68■□□□□ 0.26
SNAPC5-204ENST00000562411 HSPA2P54652 639 aa16.68■□□□□ 0.26
SNAPC5-204ENST00000562411 LMTK2Q8IWU2 1503 aa16.68■□□□□ 0.26
SNAPC5-204ENST00000562411 TET3O43151 1660 aa16.68■□□□□ 0.26
SNAPC5-204ENST00000562411 ERVK-7P63135 1459 aa16.67■□□□□ 0.26
SNAPC5-204ENST00000562411 IQGAP3Q86VI3 1631 aa16.67■□□□□ 0.26
SNAPC5-204ENST00000562411 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.67■□□□□ 0.265e-6■□□□□ 8.1
SNAPC5-204ENST00000562411 TNRQ92752 1358 aa16.66■□□□□ 0.26
SNAPC5-204ENST00000562411 CFAP65Q6ZU64 1925 aaKnown RBP16.65■□□□□ 0.26
SNAPC5-204ENST00000562411 STRCQ7RTU9 1775 aa16.64■□□□□ 0.25
SNAPC5-204ENST00000562411 A2ML1A8K2U0 1454 aa16.64■□□□□ 0.25
SNAPC5-204ENST00000562411 ARHGAP31Q2M1Z3 1444 aa16.62■□□□□ 0.25
SNAPC5-204ENST00000562411 POLR1AO95602 1720 aaPredicted RBP16.62■□□□□ 0.25
SNAPC5-204ENST00000562411 FBXO31Q5XUX0 539 aaPredicted RBP16.62■□□□□ 0.25
SNAPC5-204ENST00000562411 E9PCH4 1651 aa16.62■□□□□ 0.25
SNAPC5-204ENST00000562411 NLRP1Q9C000 1473 aa16.61■□□□□ 0.25
SNAPC5-204ENST00000562411 NAIPQ13075 1403 aa16.61■□□□□ 0.25
SNAPC5-204ENST00000562411 SYNMO15061 1565 aa16.6■□□□□ 0.25
SNAPC5-204ENST00000562411 HFM1A2PYH4 1435 aa16.6■□□□□ 0.25
SNAPC5-204ENST00000562411 UBR1Q8IWV7 1749 aa16.59■□□□□ 0.25
SNAPC5-204ENST00000562411 UGGT1Q9NYU2 1555 aa16.59■□□□□ 0.25
SNAPC5-204ENST00000562411 PIK3C2BO00750 1634 aa16.59■□□□□ 0.25
SNAPC5-204ENST00000562411 PLA2R1Q13018 1463 aa16.57■□□□□ 0.24
SNAPC5-204ENST00000562411 RPRD2Q5VT52 1461 aaKnown RBP16.56■□□□□ 0.24
SNAPC5-204ENST00000562411 SPHKAPQ2M3C7 1700 aa16.54■□□□□ 0.24
SNAPC5-204ENST00000562411 NUP155O75694 1391 aa16.53■□□□□ 0.24
SNAPC5-204ENST00000562411 ADGRB3O60242 1522 aa16.53■□□□□ 0.24
SNAPC5-204ENST00000562411 NOS1P29475 1434 aa16.53■□□□□ 0.24
SNAPC5-204ENST00000562411 KDM5AP29375 1690 aaKnown RBP16.53■□□□□ 0.24
SNAPC5-204ENST00000562411 NEURL4Q96JN8 1562 aa16.52■□□□□ 0.24
SNAPC5-204ENST00000562411 MYO5BQ9ULV0 1848 aa16.5■□□□□ 0.23
SNAPC5-204ENST00000562411 IQGAP1P46940 1657 aa16.48■□□□□ 0.23
SNAPC5-204ENST00000562411 PTPRTO14522 1441 aa16.47■□□□□ 0.23
SNAPC5-204ENST00000562411 NCKAP5LQ9HCH0 1330 aa16.45■□□□□ 0.22
SNAPC5-204ENST00000562411 SLIT1O75093 1534 aa16.45■□□□□ 0.22
SNAPC5-204ENST00000562411 TMEM131LA2VDJ0 1609 aa16.44■□□□□ 0.22
SNAPC5-204ENST00000562411 CLTCL1P53675 1640 aa16.44■□□□□ 0.22
SNAPC5-204ENST00000562411 TRPM2O94759 1503 aa16.44■□□□□ 0.22
SNAPC5-204ENST00000562411 ARHGAP23Q9P227 1491 aa16.43■□□□□ 0.22
SNAPC5-204ENST00000562411 SCAF11Q99590 1463 aaKnown RBP16.42■□□□□ 0.22
SNAPC5-204ENST00000562411 TRIM52Q96A61 297 aa16.42■□□□□ 0.22
SNAPC5-204ENST00000562411 PKD2Q13563 968 aa16.41■□□□□ 0.22
SNAPC5-204ENST00000562411 THEMISQ8N1K5 641 aaPredicted RBP16.41■□□□□ 0.22
SNAPC5-204ENST00000562411 DMRT2Q9Y5R5 561 aa16.41■□□□□ 0.22
SNAPC5-204ENST00000562411 SETD5Q9C0A6 1442 aa16.41■□□□□ 0.22
SNAPC5-204ENST00000562411 NPHP4O75161 1426 aaPredicted RBP16.4■□□□□ 0.22
SNAPC5-204ENST00000562411 STAG3Q9UJ98 1225 aa16.4■□□□□ 0.22
SNAPC5-204ENST00000562411 MED14O60244 1454 aa16.39■□□□□ 0.21
SNAPC5-204ENST00000562411 KIF1BO60333 1816 aa16.38■□□□□ 0.21
SNAPC5-204ENST00000562411 IDI1Q13907 227 aa16.38■□□□□ 0.21
SNAPC5-204ENST00000562411 RAB3GAP2Q9H2M9 1393 aa16.38■□□□□ 0.21
SNAPC5-204ENST00000562411 TMEM2Q9UHN6 1383 aa16.38■□□□□ 0.21
SNAPC5-204ENST00000562411 ANKLE2Q86XL3 938 aa16.37■□□□□ 0.21
SNAPC5-204ENST00000562411 LTBP4Q8N2S1 1624 aa16.37■□□□□ 0.21
SNAPC5-204ENST00000562411 FBXO41Q8TF61 875 aa16.36■□□□□ 0.21
SNAPC5-204ENST00000562411 SLC52A1Q9NWF4 448 aa16.36■□□□□ 0.21
SNAPC5-204ENST00000562411 SLC4A1APQ9BWU0 796 aaKnown RBP16.35■□□□□ 0.21
SNAPC5-204ENST00000562411 ZFYVE9O95405 1425 aa16.34■□□□□ 0.21
SNAPC5-204ENST00000562411 CHGAP10645 457 aaKnown RBP16.33■□□□□ 0.2
SNAPC5-204ENST00000562411 STRCP1A6NGW2 1772 aa16.32■□□□□ 0.2
SNAPC5-204ENST00000562411 ZNF335Q9H4Z2 1342 aaPredicted RBP16.32■□□□□ 0.2
SNAPC5-204ENST00000562411 RIMS2Q9UQ26 1411 aa16.32■□□□□ 0.2
SNAPC5-204ENST00000562411 LTKP29376 864 aa16.3■□□□□ 0.2
SNAPC5-204ENST00000562411 EID1Q9Y6B2 187 aa16.3■□□□□ 0.2
SNAPC5-204ENST00000562411 TXNDC2Q86VQ3 553 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms