RNA–Protein interactions for RNA: ENST00000562119.5

PDXDC1-207, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 5

Gene PDXDC1, Length 884 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-207ENST00000562119 TIAM1Q13009 1591 aa32.66■■■□□ 2.82
PDXDC1-207ENST00000562119 MED1Q15648 1581 aaPredicted RBP32.66■■■□□ 2.82
PDXDC1-207ENST00000562119 TNRQ92752 1358 aa32.66■■■□□ 2.82
PDXDC1-207ENST00000562119 RTEL1-TNFRSF6BF6WH68 1400 aa32.66■■■□□ 2.82
PDXDC1-207ENST00000562119 CPS1P31327 1500 aa32.66■■■□□ 2.82
PDXDC1-207ENST00000562119 SHANK2Q9UPX8 1470 aa32.65■■■□□ 2.82
PDXDC1-207ENST00000562119 TOM1O60784 492 aa32.64■■■□□ 2.82
PDXDC1-207ENST00000562119 POLR1AO95602 1720 aaPredicted RBP32.62■■■□□ 2.81
PDXDC1-207ENST00000562119 PZPP20742 1482 aa32.61■■■□□ 2.81
PDXDC1-207ENST00000562119 KIF3BO15066 747 aa32.6■■■□□ 2.81
PDXDC1-207ENST00000562119 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP32.58■■■□□ 2.816e-6■□□□□ 9.1
PDXDC1-207ENST00000562119 KDM5DQ9BY66 1539 aa32.56■■■□□ 2.8
PDXDC1-207ENST00000562119 VWDEQ8N2E2 1590 aa32.56■■■□□ 2.8
PDXDC1-207ENST00000562119 ANKLE2Q86XL3 938 aa32.55■■■□□ 2.8
PDXDC1-207ENST00000562119 EHBP1L1Q8N3D4 1523 aa32.53■■■□□ 2.8
PDXDC1-207ENST00000562119 WASHC2CQ9Y4E1 1318 aa32.52■■■□□ 2.8
PDXDC1-207ENST00000562119 CEP162Q5TB80 1403 aa32.52■■■□□ 2.8
PDXDC1-207ENST00000562119 ALKQ9UM73 1620 aa32.52■■■□□ 2.8
PDXDC1-207ENST00000562119 MIA2Q96PC5 1412 aa32.51■■■□□ 2.8
PDXDC1-207ENST00000562119 FAM135AQ9P2D6 1515 aa32.51■■■□□ 2.8
PDXDC1-207ENST00000562119 THEMISQ8N1K5 641 aaPredicted RBP32.5■■■□□ 2.79
PDXDC1-207ENST00000562119 CCDC141Q6ZP82 1450 aa32.49■■■□□ 2.79
PDXDC1-207ENST00000562119 MED14O60244 1454 aa32.48■■■□□ 2.79
PDXDC1-207ENST00000562119 NPHP4O75161 1426 aaPredicted RBP32.48■■■□□ 2.79
PDXDC1-207ENST00000562119 NLRP1Q9C000 1473 aa32.48■■■□□ 2.79
PDXDC1-207ENST00000562119 UGGT1Q9NYU2 1555 aa32.46■■■□□ 2.79
PDXDC1-207ENST00000562119 DEPDC5O75140 1603 aa32.44■■■□□ 2.78
PDXDC1-207ENST00000562119 CAMSAP2Q08AD1 1489 aa32.43■■■□□ 2.78
PDXDC1-207ENST00000562119 PHF23Q9BUL5 403 aaPredicted RBP32.4■■■□□ 2.78
PDXDC1-207ENST00000562119 RSPH4AQ5TD94 716 aa32.39■■■□□ 2.78
PDXDC1-207ENST00000562119 NCOA2Q15596 1464 aa32.38■■■□□ 2.77
PDXDC1-207ENST00000562119 IQGAP1P46940 1657 aa32.36■■■□□ 2.77
PDXDC1-207ENST00000562119 LRRC7Q96NW7 1537 aa32.36■■■□□ 2.77
PDXDC1-207ENST00000562119 SENP3Q9H4L4 574 aaPredicted RBP32.35■■■□□ 2.77
PDXDC1-207ENST00000562119 STRCP1A6NGW2 1772 aa32.35■■■□□ 2.77
PDXDC1-207ENST00000562119 ARHGEF5Q12774 1597 aa32.3■■■□□ 2.76
PDXDC1-207ENST00000562119 TSPY4P0CV99 314 aa32.29■■■□□ 2.76
PDXDC1-207ENST00000562119 TSPY10P0CW01 314 aa32.29■■■□□ 2.76
PDXDC1-207ENST00000562119 ABCC3O15438 1527 aa32.29■■■□□ 2.76
PDXDC1-207ENST00000562119 RNF17Q9BXT8 1623 aaKnown RBP32.27■■■□□ 2.76
PDXDC1-207ENST00000562119 ERVK-7P63135 1459 aa32.25■■■□□ 2.75
PDXDC1-207ENST00000562119 SYNMO15061 1565 aa32.24■■■□□ 2.75
PDXDC1-207ENST00000562119 ZC3H13Q5T200 1668 aaKnown RBP32.21■■■□□ 2.75
PDXDC1-207ENST00000562119 RGS17Q9UGC6 210 aaPredicted RBP32.18■■■□□ 2.74
PDXDC1-207ENST00000562119 MROH1Q8NDA8 1641 aa32.18■■■□□ 2.74
PDXDC1-207ENST00000562119 MAST1Q9Y2H9 1570 aa32.16■■■□□ 2.74
PDXDC1-207ENST00000562119 SCAF11Q99590 1463 aaKnown RBP32.16■■■□□ 2.74
PDXDC1-207ENST00000562119 UBR1Q8IWV7 1749 aa32.15■■■□□ 2.74
PDXDC1-207ENST00000562119 LTKP29376 864 aa32.15■■■□□ 2.74
PDXDC1-207ENST00000562119 EIF2AK4Q9P2K8 1649 aaKnown RBP32.14■■■□□ 2.74
PDXDC1-207ENST00000562119 ARHGAP23Q9P227 1491 aa32.1■■■□□ 2.73
PDXDC1-207ENST00000562119 TXNDC2Q86VQ3 553 aa32.09■■■□□ 2.73
PDXDC1-207ENST00000562119 SLIT1O75093 1534 aa32.09■■■□□ 2.73
PDXDC1-207ENST00000562119 CEP152O94986 1710 aa32.09■■■□□ 2.73
PDXDC1-207ENST00000562119 LRRC9Q6ZRR7 1453 aa32.06■■■□□ 2.72
PDXDC1-207ENST00000562119 XIRP1Q702N8 1843 aaKnown RBP32.05■■■□□ 2.72
PDXDC1-207ENST00000562119 CFAP65Q6ZU64 1925 aaKnown RBP32.04■■■□□ 2.72
PDXDC1-207ENST00000562119 ARHGAP31Q2M1Z3 1444 aa32■■■□□ 2.71
PDXDC1-207ENST00000562119 DUOX2Q9NRD8 1548 aa32■■■□□ 2.71
PDXDC1-207ENST00000562119 FAM135BQ49AJ0 1406 aa32■■■□□ 2.71
PDXDC1-207ENST00000562119 EID1Q9Y6B2 187 aa31.98■■■□□ 2.71
PDXDC1-207ENST00000562119 PRDM15P57071 1507 aaPredicted RBP31.96■■■□□ 2.71
PDXDC1-207ENST00000562119 KANK4Q5T7N3 995 aaPredicted RBP31.96■■■□□ 2.71
PDXDC1-207ENST00000562119 TMEM2Q9UHN6 1383 aa31.95■■■□□ 2.71
PDXDC1-207ENST00000562119 MYOM3Q5VTT5 1437 aa31.94■■■□□ 2.7
PDXDC1-207ENST00000562119 POTEAQ6S8J7 498 aa31.94■■■□□ 2.7
PDXDC1-207ENST00000562119 TMEM94Q12767 1356 aa31.94■■■□□ 2.7
PDXDC1-207ENST00000562119 PIK3C2BO00750 1634 aa31.93■■■□□ 2.7
PDXDC1-207ENST00000562119 KIF15Q9NS87 1388 aa31.93■■■□□ 2.7
PDXDC1-207ENST00000562119 VPS8Q8N3P4 1428 aa31.91■■■□□ 2.7
PDXDC1-207ENST00000562119 GRWD1Q9BQ67 446 aaKnown RBP eCLIP31.88■■■□□ 2.694e-7■■□□□ 12.8
PDXDC1-207ENST00000562119 RRP7BPQ9NSQ0 103 aa31.88■■■□□ 2.69
PDXDC1-207ENST00000562119 ERBINQ96RT1 1412 aa31.88■■■□□ 2.69
PDXDC1-207ENST00000562119 KCNA6P17658 529 aa31.86■■■□□ 2.69
PDXDC1-207ENST00000562119 RBM33Q96EV2 1170 aaKnown RBP31.86■■■□□ 2.69
PDXDC1-207ENST00000562119 MAP3K1Q13233 1512 aa31.85■■■□□ 2.69
PDXDC1-207ENST00000562119 STAG3Q9UJ98 1225 aa31.85■■■□□ 2.69
PDXDC1-207ENST00000562119 ABCC5O15440 1437 aa31.84■■■□□ 2.69
PDXDC1-207ENST00000562119 IDI1Q13907 227 aa31.84■■■□□ 2.69
PDXDC1-207ENST00000562119 ROBO1Q9Y6N7 1651 aa31.83■■■□□ 2.69
PDXDC1-207ENST00000562119 SLC26A8Q96RN1 970 aa31.83■■■□□ 2.69
PDXDC1-207ENST00000562119 EFCAB6Q5THR3 1501 aa31.83■■■□□ 2.69
PDXDC1-207ENST00000562119 TET3O43151 1660 aa31.83■■■□□ 2.69
PDXDC1-207ENST00000562119 PROSER2Q86WR7 435 aaPredicted RBP31.82■■■□□ 2.68
PDXDC1-207ENST00000562119 KDM5AP29375 1690 aaKnown RBP31.78■■■□□ 2.68
PDXDC1-207ENST00000562119 CROCC2H7BZ55 1655 aa31.77■■■□□ 2.68
PDXDC1-207ENST00000562119 KANK1Q14678 1352 aa31.77■■■□□ 2.68
PDXDC1-207ENST00000562119 LMTK2Q8IWU2 1503 aa31.75■■■□□ 2.67
PDXDC1-207ENST00000562119 NKTRP30414 1462 aaKnown RBP31.72■■■□□ 2.67
PDXDC1-207ENST00000562119 DAPK1P53355 1430 aa31.72■■■□□ 2.67
PDXDC1-207ENST00000562119 NWD1Q149M9 1564 aa31.72■■■□□ 2.67
PDXDC1-207ENST00000562119 NOS1P29475 1434 aa31.7■■■□□ 2.67
PDXDC1-207ENST00000562119 PTPN23Q9H3S7 1636 aa31.7■■■□□ 2.66
PDXDC1-207ENST00000562119 LOC105371045A0A1W2PR82 267 aa31.68■■■□□ 2.66
PDXDC1-207ENST00000562119 SLAIN2Q9P270 581 aa31.68■■■□□ 2.66
PDXDC1-207ENST00000562119 ADGRB3O60242 1522 aa31.68■■■□□ 2.66
PDXDC1-207ENST00000562119 MSH6P52701 1360 aa31.68■■■□□ 2.66
PDXDC1-207ENST00000562119 SETD1AO15047 1707 aaKnown RBP31.66■■■□□ 2.66
PDXDC1-207ENST00000562119 CHIC2Q9UKJ5 165 aa31.64■■■□□ 2.66
PDXDC1-207ENST00000562119 JCADQ9P266 1359 aa31.64■■■□□ 2.66
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms