RNA–Protein interactions for RNA: ENST00000561749.1

SMPD3-202, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 2

Gene SMPD3, Length 627 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-202ENST00000561749 C3P01024 1663 aa35.69■■■■□ 3.3
SMPD3-202ENST00000561749 RNF17Q9BXT8 1623 aaKnown RBP35.68■■■■□ 3.3
SMPD3-202ENST00000561749 CEBPAP49715 358 aaPredicted RBP35.67■■■■□ 3.3
SMPD3-202ENST00000561749 ERBINQ96RT1 1412 aa35.66■■■■□ 3.3
SMPD3-202ENST00000561749 MROH2AA6NES4 1674 aa35.65■■■■□ 3.3
SMPD3-202ENST00000561749 CNTLNQ9NXG0 1405 aa35.65■■■■□ 3.3
SMPD3-202ENST00000561749 MROH1Q8NDA8 1641 aa35.61■■■■□ 3.29
SMPD3-202ENST00000561749 KDM5DQ9BY66 1539 aa35.57■■■■□ 3.29
SMPD3-202ENST00000561749 ROCK1Q13464 1354 aa35.57■■■■□ 3.28
SMPD3-202ENST00000561749 PPP6R1Q9UPN7 881 aa35.56■■■■□ 3.28
SMPD3-202ENST00000561749 CEP152O94986 1710 aa35.56■■■■□ 3.28
SMPD3-202ENST00000561749 DEPDC5O75140 1603 aa35.54■■■■□ 3.28
SMPD3-202ENST00000561749 ZMYM3Q14202 1370 aa35.54■■■■□ 3.28
SMPD3-202ENST00000561749 ANKRD50Q9ULJ7 1429 aa35.54■■■■□ 3.28
SMPD3-202ENST00000561749 WASHC2CQ9Y4E1 1318 aa35.53■■■■□ 3.28
SMPD3-202ENST00000561749 FAM135AQ9P2D6 1515 aa35.52■■■■□ 3.28
SMPD3-202ENST00000561749 ZC3H13Q5T200 1668 aaKnown RBP35.51■■■■□ 3.28
SMPD3-202ENST00000561749 PRDM15P57071 1507 aaPredicted RBP35.51■■■■□ 3.27
SMPD3-202ENST00000561749 GRWD1Q9BQ67 446 aaKnown RBP eCLIP35.5■■■■□ 3.27
SMPD3-202ENST00000561749 ABCC3O15438 1527 aa35.49■■■■□ 3.27
SMPD3-202ENST00000561749 PREX1Q8TCU6 1659 aa35.45■■■■□ 3.27
SMPD3-202ENST00000561749 SETD1BQ9UPS6 1966 aaKnown RBP35.44■■■■□ 3.26
SMPD3-202ENST00000561749 CAMSAP1Q5T5Y3 1602 aa35.43■■■■□ 3.26
SMPD3-202ENST00000561749 GCC2Q8IWJ2 1684 aa35.42■■■■□ 3.26
SMPD3-202ENST00000561749 CFAP65Q6ZU64 1925 aaKnown RBP35.4■■■■□ 3.26
SMPD3-202ENST00000561749 LMTK3Q96Q04 1460 aa35.4■■■■□ 3.26
SMPD3-202ENST00000561749 KANK1Q14678 1352 aa35.38■■■■□ 3.26
SMPD3-202ENST00000561749 UNC13BO14795 1591 aa35.38■■■■□ 3.25
SMPD3-202ENST00000561749 VWDEQ8N2E2 1590 aa35.37■■■■□ 3.25
SMPD3-202ENST00000561749 PZPP20742 1482 aa35.36■■■■□ 3.25
SMPD3-202ENST00000561749 NPATQ14207 1427 aa35.36■■■■□ 3.25
SMPD3-202ENST00000561749 NAIPQ13075 1403 aa35.34■■■■□ 3.25
SMPD3-202ENST00000561749 FBXO31Q5XUX0 539 aaPredicted RBP35.34■■■■□ 3.25
SMPD3-202ENST00000561749 UHRF1BP1Q6BDS2 1440 aa35.32■■■■□ 3.24
SMPD3-202ENST00000561749 MYO3AQ8NEV4 1616 aa35.3■■■■□ 3.24
SMPD3-202ENST00000561749 HFM1A2PYH4 1435 aa35.28■■■■□ 3.24
SMPD3-202ENST00000561749 LMTK2Q8IWU2 1503 aa35.27■■■■□ 3.24
SMPD3-202ENST00000561749 HSPA2P54652 639 aa35.27■■■■□ 3.24
SMPD3-202ENST00000561749 TNRQ92752 1358 aa35.24■■■■□ 3.23
SMPD3-202ENST00000561749 IQGAP3Q86VI3 1631 aa35.23■■■■□ 3.23
SMPD3-202ENST00000561749 EFCAB6Q5THR3 1501 aa35.22■■■■□ 3.23
SMPD3-202ENST00000561749 TET3O43151 1660 aa35.22■■■■□ 3.23
SMPD3-202ENST00000561749 ERVK-7P63135 1459 aa35.22■■■■□ 3.23
SMPD3-202ENST00000561749 SPATA31D1Q6ZQQ2 1576 aa35.21■■■■□ 3.23
SMPD3-202ENST00000561749 ARHGAP31Q2M1Z3 1444 aa35.2■■■■□ 3.23
SMPD3-202ENST00000561749 ZNF142P52746 1687 aaPredicted RBP35.2■■■■□ 3.23
SMPD3-202ENST00000561749 NUP155O75694 1391 aa35.19■■■■□ 3.22
SMPD3-202ENST00000561749 CEP170BQ9Y4F5 1589 aaPredicted RBP35.17■■■■□ 3.22
SMPD3-202ENST00000561749 E9PCH4 1651 aa35.13■■■■□ 3.21
SMPD3-202ENST00000561749 A2ML1A8K2U0 1454 aa35.1■■■■□ 3.21
SMPD3-202ENST00000561749 TRIM52Q96A61 297 aa35.07■■■■□ 3.2
SMPD3-202ENST00000561749 NLRP1Q9C000 1473 aa35.06■■■■□ 3.2
SMPD3-202ENST00000561749 SYNMO15061 1565 aa35.05■■■■□ 3.2
SMPD3-202ENST00000561749 RPRD2Q5VT52 1461 aaKnown RBP35.04■■■■□ 3.2
SMPD3-202ENST00000561749 STRCQ7RTU9 1775 aa35.03■■■■□ 3.2
SMPD3-202ENST00000561749 SETD5Q9C0A6 1442 aa35.02■■■■□ 3.2
SMPD3-202ENST00000561749 NOS1P29475 1434 aa35■■■■□ 3.19
SMPD3-202ENST00000561749 UGGT1Q9NYU2 1555 aa34.99■■■■□ 3.19
SMPD3-202ENST00000561749 PIK3C2BO00750 1634 aa34.98■■■■□ 3.19
SMPD3-202ENST00000561749 UBR1Q8IWV7 1749 aa34.96■■■■□ 3.19
SMPD3-202ENST00000561749 RAB3GAP2Q9H2M9 1393 aa34.93■■■■□ 3.18
SMPD3-202ENST00000561749 SPHKAPQ2M3C7 1700 aa34.92■■■■□ 3.18
SMPD3-202ENST00000561749 IDI1Q13907 227 aa34.89■■■■□ 3.18
SMPD3-202ENST00000561749 PLA2R1Q13018 1463 aa34.89■■■■□ 3.18
SMPD3-202ENST00000561749 SLC4A1APQ9BWU0 796 aaKnown RBP34.88■■■■□ 3.17
SMPD3-202ENST00000561749 NCKAP5LQ9HCH0 1330 aa34.87■■■■□ 3.17
SMPD3-202ENST00000561749 POLR1AO95602 1720 aaPredicted RBP34.87■■■■□ 3.17
SMPD3-202ENST00000561749 MYO5BQ9ULV0 1848 aa34.86■■■■□ 3.17
SMPD3-202ENST00000561749 THEMISQ8N1K5 641 aaPredicted RBP34.86■■■■□ 3.17
SMPD3-202ENST00000561749 PKD2Q13563 968 aa34.85■■■■□ 3.17
SMPD3-202ENST00000561749 STAG3Q9UJ98 1225 aa34.83■■■■□ 3.17
SMPD3-202ENST00000561749 ADGRB3O60242 1522 aa34.82■■■■□ 3.16
SMPD3-202ENST00000561749 SLC52A1Q9NWF4 448 aa34.82■■■■□ 3.16
SMPD3-202ENST00000561749 KDM5AP29375 1690 aaKnown RBP34.81■■■■□ 3.16
SMPD3-202ENST00000561749 PTPRTO14522 1441 aa34.78■■■■□ 3.16
SMPD3-202ENST00000561749 FOXD1Q16676 465 aa34.77■■■■□ 3.16
SMPD3-202ENST00000561749 MPHOSPH9Q99550 1183 aa34.77■■■■□ 3.16
SMPD3-202ENST00000561749 NEURL4Q96JN8 1562 aa34.76■■■■□ 3.16
SMPD3-202ENST00000561749 TMEM131LA2VDJ0 1609 aa34.75■■■■□ 3.15
SMPD3-202ENST00000561749 CLTCL1P53675 1640 aa34.74■■■■□ 3.15
SMPD3-202ENST00000561749 CHGAP10645 457 aaKnown RBP34.74■■■■□ 3.15
SMPD3-202ENST00000561749 TRPM2O94759 1503 aa34.74■■■■□ 3.15
SMPD3-202ENST00000561749 ANKLE2Q86XL3 938 aa34.73■■■■□ 3.15
SMPD3-202ENST00000561749 DMRT2Q9Y5R5 561 aa34.73■■■■□ 3.15
SMPD3-202ENST00000561749 ACIN1Q9UKV3 1341 aaKnown RBP34.72■■■■□ 3.15
SMPD3-202ENST00000561749 SLIT1O75093 1534 aa34.71■■■■□ 3.15
SMPD3-202ENST00000561749 ARHGAP23Q9P227 1491 aa34.71■■■■□ 3.15
SMPD3-202ENST00000561749 TMEM2Q9UHN6 1383 aa34.68■■■■□ 3.14
SMPD3-202ENST00000561749 TRIM26Q12899 539 aaPredicted RBP34.67■■■■□ 3.14
SMPD3-202ENST00000561749 KIF1BO60333 1816 aa34.66■■■■□ 3.14
SMPD3-202ENST00000561749 SCAF11Q99590 1463 aaKnown RBP34.65■■■■□ 3.14
SMPD3-202ENST00000561749 IQGAP1P46940 1657 aa34.64■■■■□ 3.14
SMPD3-202ENST00000561749 LTKP29376 864 aa34.64■■■■□ 3.14
SMPD3-202ENST00000561749 TXNDC2Q86VQ3 553 aa34.64■■■■□ 3.14
SMPD3-202ENST00000561749 HRCP23327 699 aa34.63■■■■□ 3.13
SMPD3-202ENST00000561749 NPHP4O75161 1426 aaPredicted RBP34.63■■■■□ 3.13
SMPD3-202ENST00000561749 MED14O60244 1454 aa34.6■■■■□ 3.13
SMPD3-202ENST00000561749 EID1Q9Y6B2 187 aa34.6■■■■□ 3.13
SMPD3-202ENST00000561749 RIMS2Q9UQ26 1411 aa34.57■■■■□ 3.13
SMPD3-202ENST00000561749 ZFYVE9O95405 1425 aa34.55■■■■□ 3.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms