RNA–Protein interactions for RNA: ENST00000561638.1

TMEM249-201, Transcript of transmembrane protein 249, humanhuman

TSL 2

Gene TMEM249, Length 1,762 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM249-201ENST00000561638 HRCP23327 699 aa34.59■■■■□ 3.13
TMEM249-201ENST00000561638 ACIN1Q9UKV3 1341 aaKnown RBP34.58■■■■□ 3.13
TMEM249-201ENST00000561638 MLECQ14165 292 aa34.58■■■■□ 3.13
TMEM249-201ENST00000561638 BCORL1Q5H9F3 1711 aa34.58■■■■□ 3.13
TMEM249-201ENST00000561638 NUP155O75694 1391 aa34.55■■■■□ 3.12
TMEM249-201ENST00000561638 RNF17Q9BXT8 1623 aaKnown RBP34.55■■■■□ 3.12
TMEM249-201ENST00000561638 UNC13BO14795 1591 aa34.54■■■■□ 3.12
TMEM249-201ENST00000561638 KANK1Q14678 1352 aa34.54■■■■□ 3.12
TMEM249-201ENST00000561638 DEPDC5O75140 1603 aa34.53■■■■□ 3.12
TMEM249-201ENST00000561638 PRDM15P57071 1507 aaPredicted RBP34.5■■■■□ 3.11
TMEM249-201ENST00000561638 MROH1Q8NDA8 1641 aa34.48■■■■□ 3.11
TMEM249-201ENST00000561638 WASHC2CQ9Y4E1 1318 aa34.46■■■■□ 3.11
TMEM249-201ENST00000561638 ESF1Q9H501 851 aaKnown RBP34.44■■■■□ 3.1
TMEM249-201ENST00000561638 SLC4A1APQ9BWU0 796 aaKnown RBP34.42■■■■□ 3.1
TMEM249-201ENST00000561638 KDM5DQ9BY66 1539 aa34.42■■■■□ 3.1
TMEM249-201ENST00000561638 FAM135AQ9P2D6 1515 aa34.42■■■■□ 3.1
TMEM249-201ENST00000561638 IQGAP3Q86VI3 1631 aa34.41■■■■□ 3.1
TMEM249-201ENST00000561638 PPP6R1Q9UPN7 881 aa34.41■■■■□ 3.1
TMEM249-201ENST00000561638 VWDEQ8N2E2 1590 aa34.37■■■■□ 3.09
TMEM249-201ENST00000561638 MPHOSPH9Q99550 1183 aa34.37■■■■□ 3.09
TMEM249-201ENST00000561638 PZPP20742 1482 aa34.37■■■■□ 3.09
TMEM249-201ENST00000561638 ABCC3O15438 1527 aa34.36■■■■□ 3.09
TMEM249-201ENST00000561638 CEP152O94986 1710 aa34.34■■■■□ 3.09
TMEM249-201ENST00000561638 ZC3H13Q5T200 1668 aaKnown RBP34.34■■■■□ 3.09
TMEM249-201ENST00000561638 CLTCQ00610 1675 aaKnown RBP34.29■■■■□ 3.08
TMEM249-201ENST00000561638 PKD2Q13563 968 aa34.29■■■■□ 3.08
TMEM249-201ENST00000561638 LMTK2Q8IWU2 1503 aa34.29■■■■□ 3.08
TMEM249-201ENST00000561638 TET3O43151 1660 aa34.29■■■■□ 3.08
TMEM249-201ENST00000561638 DHX57Q6P158 1386 aaKnown RBP34.28■■■■□ 3.08
TMEM249-201ENST00000561638 FER1L4A9Z1Z3 1794 aa34.28■■■■□ 3.08
TMEM249-201ENST00000561638 CNTLNQ9NXG0 1405 aa34.28■■■■□ 3.08
TMEM249-201ENST00000561638 CAMSAP1Q5T5Y3 1602 aa34.26■■■■□ 3.07
TMEM249-201ENST00000561638 EFCAB6Q5THR3 1501 aa34.25■■■■□ 3.07
TMEM249-201ENST00000561638 CCER1Q8TC90 406 aaPredicted RBP34.23■■■■□ 3.07
TMEM249-201ENST00000561638 MADDQ8WXG6 1647 aa34.23■■■■□ 3.07
TMEM249-201ENST00000561638 FOXD1Q16676 465 aa34.22■■■■□ 3.07
TMEM249-201ENST00000561638 ADAMTSL3P82987 1691 aa34.21■■■■□ 3.07
TMEM249-201ENST00000561638 ZMYM3Q14202 1370 aa34.18■■■■□ 3.06
TMEM249-201ENST00000561638 E9PCH4 1651 aa34.18■■■■□ 3.06
TMEM249-201ENST00000561638 NPATQ14207 1427 aa34.17■■■■□ 3.06
TMEM249-201ENST00000561638 RIMS1Q86UR5 1692 aaKnown RBP34.16■■■■□ 3.06
TMEM249-201ENST00000561638 RPRD2Q5VT52 1461 aaKnown RBP34.16■■■■□ 3.06
TMEM249-201ENST00000561638 ARHGAP31Q2M1Z3 1444 aa34.15■■■■□ 3.06
TMEM249-201ENST00000561638 MROH2AA6NES4 1674 aa34.15■■■■□ 3.06
TMEM249-201ENST00000561638 PLPPR3Q6T4P5 718 aa34.14■■■■□ 3.06
TMEM249-201ENST00000561638 CEBPAP49715 358 aaPredicted RBP34.08■■■■□ 3.05
TMEM249-201ENST00000561638 CFAP65Q6ZU64 1925 aaKnown RBP34.07■■■■□ 3.05
TMEM249-201ENST00000561638 FBXO31Q5XUX0 539 aaPredicted RBP34.06■■■■□ 3.04
TMEM249-201ENST00000561638 C3P01024 1663 aa34.05■■■■□ 3.04
TMEM249-201ENST00000561638 SPHKAPQ2M3C7 1700 aa34.03■■■■□ 3.04
TMEM249-201ENST00000561638 ANKRD30BQ9BXX2 1392 aa34.02■■■■□ 3.04
TMEM249-201ENST00000561638 ERVK-7P63135 1459 aa34.02■■■■□ 3.04
TMEM249-201ENST00000561638 PREX1Q8TCU6 1659 aa34.01■■■■□ 3.04
TMEM249-201ENST00000561638 KDM4FA0A1W2PPD8 638 aa34.01■■■■□ 3.04
TMEM249-201ENST00000561638 PTPRMP28827 1452 aa34■■■■□ 3.03
TMEM249-201ENST00000561638 PTPRTO14522 1441 aa33.99■■■■□ 3.03
TMEM249-201ENST00000561638 CLSPNQ9HAW4 1339 aa33.98■■■■□ 3.03
TMEM249-201ENST00000561638 NOS1P29475 1434 aa33.98■■■■□ 3.03
TMEM249-201ENST00000561638 PLA2R1Q13018 1463 aa33.98■■■■□ 3.03
TMEM249-201ENST00000561638 TRPM2O94759 1503 aa33.97■■■■□ 3.03
TMEM249-201ENST00000561638 CCDC144AA2RUR9 1427 aa33.97■■■■□ 3.03
TMEM249-201ENST00000561638 SPATA31D1Q6ZQQ2 1576 aa33.96■■■■□ 3.03
TMEM249-201ENST00000561638 TNRQ92752 1358 aa33.93■■■■□ 3.02
TMEM249-201ENST00000561638 SYNMO15061 1565 aa33.92■■■■□ 3.02
TMEM249-201ENST00000561638 NEUROD1Q13562 356 aa33.9■■■■□ 3.02
TMEM249-201ENST00000561638 SIN3AQ96ST3 1273 aa33.9■■■■□ 3.02
TMEM249-201ENST00000561638 UGGT1Q9NYU2 1555 aa33.9■■■■□ 3.02
TMEM249-201ENST00000561638 SLC52A1Q9NWF4 448 aa33.88■■■■□ 3.01
TMEM249-201ENST00000561638 CLTCL1P53675 1640 aa33.86■■■■□ 3.01
TMEM249-201ENST00000561638 IDI1Q13907 227 aa33.83■■■■□ 3.01
TMEM249-201ENST00000561638 CHGAP10645 457 aaKnown RBP33.82■■■■□ 3
TMEM249-201ENST00000561638 PIK3C2BO00750 1634 aa33.8■■■■□ 3
TMEM249-201ENST00000561638 STAG3Q9UJ98 1225 aa33.8■■■■□ 3
TMEM249-201ENST00000561638 NLRP1Q9C000 1473 aa33.78■■■■□ 3
TMEM249-201ENST00000561638 MYO3AQ8NEV4 1616 aa33.75■■■□□ 2.99
TMEM249-201ENST00000561638 KIF1BO60333 1816 aa33.74■■■□□ 2.99
TMEM249-201ENST00000561638 SETD1BQ9UPS6 1966 aaKnown RBP33.73■■■□□ 2.99
TMEM249-201ENST00000561638 RGL3Q3MIN7 710 aa33.72■■■□□ 2.99
TMEM249-201ENST00000561638 TONSLQ96HA7 1378 aa33.72■■■□□ 2.99
TMEM249-201ENST00000561638 ZNF326Q5BKZ1 582 aaKnown RBP33.7■■■□□ 2.98
TMEM249-201ENST00000561638 UHRF1BP1Q6BDS2 1440 aa33.69■■■□□ 2.98
TMEM249-201ENST00000561638 ADGRB3O60242 1522 aa33.68■■■□□ 2.98
TMEM249-201ENST00000561638 SPATA31E1Q6ZUB1 1445 aa33.67■■■□□ 2.98
TMEM249-201ENST00000561638 CEP170BQ9Y4F5 1589 aaPredicted RBP33.66■■■□□ 2.98
TMEM249-201ENST00000561638 A2ML1A8K2U0 1454 aa33.66■■■□□ 2.98
TMEM249-201ENST00000561638 TMEM131LA2VDJ0 1609 aa33.65■■■□□ 2.98
TMEM249-201ENST00000561638 UBR1Q8IWV7 1749 aa33.61■■■□□ 2.97
TMEM249-201ENST00000561638 NEURL4Q96JN8 1562 aa33.6■■■□□ 2.97
TMEM249-201ENST00000561638 KDM5AP29375 1690 aaKnown RBP33.59■■■□□ 2.97
TMEM249-201ENST00000561638 ZNF142P52746 1687 aaPredicted RBP33.59■■■□□ 2.97
TMEM249-201ENST00000561638 MYO5BQ9ULV0 1848 aa33.59■■■□□ 2.97
TMEM249-201ENST00000561638 L3MBTL2Q969R5 705 aa33.59■■■□□ 2.97
TMEM249-201ENST00000561638 THEMISQ8N1K5 641 aaPredicted RBP33.58■■■□□ 2.97
TMEM249-201ENST00000561638 TIMELESSQ9UNS1 1208 aa33.57■■■□□ 2.97
TMEM249-201ENST00000561638 DCAF11Q8TEB1 546 aa33.57■■■□□ 2.96
TMEM249-201ENST00000561638 KDM2AQ9Y2K7 1162 aa33.53■■■□□ 2.96
TMEM249-201ENST00000561638 RPGRIP1LQ68CZ1 1315 aa33.53■■■□□ 2.96
TMEM249-201ENST00000561638 TMEM2Q9UHN6 1383 aa33.5■■■□□ 2.95
TMEM249-201ENST00000561638 ZEB1P37275 1124 aaPredicted RBP33.49■■■□□ 2.95
TMEM249-201ENST00000561638 NUTM2DQ5VT03 806 aaPredicted RBP33.49■■■□□ 2.95
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms