RNA–Protein interactions for RNA: ENST00000561055.1

RABGGTA-221, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-221ENST00000561055 MROH1Q8NDA8 1641 aa14.66□□□□□ -0.06
RABGGTA-221ENST00000561055 CLTCQ00610 1675 aaKnown RBP14.65□□□□□ -0.06
RABGGTA-221ENST00000561055 ZC3H13Q5T200 1668 aaKnown RBP14.65□□□□□ -0.06
RABGGTA-221ENST00000561055 GCC2Q8IWJ2 1684 aa14.65□□□□□ -0.06
RABGGTA-221ENST00000561055 KIF3BO15066 747 aa14.64□□□□□ -0.07
RABGGTA-221ENST00000561055 CNTLNQ9NXG0 1405 aa14.64□□□□□ -0.07
RABGGTA-221ENST00000561055 PTPRMP28827 1452 aa14.63□□□□□ -0.07
RABGGTA-221ENST00000561055 C3P01024 1663 aa14.63□□□□□ -0.07
RABGGTA-221ENST00000561055 PRDM15P57071 1507 aaPredicted RBP14.62□□□□□ -0.07
RABGGTA-221ENST00000561055 KDM5DQ9BY66 1539 aa14.62□□□□□ -0.07
RABGGTA-221ENST00000561055 MLECQ14165 292 aa14.62□□□□□ -0.07
RABGGTA-221ENST00000561055 ANKRD50Q9ULJ7 1429 aa14.62□□□□□ -0.07
RABGGTA-221ENST00000561055 ITGAEP38570 1179 aa14.61□□□□□ -0.07
RABGGTA-221ENST00000561055 CEP152O94986 1710 aa14.61□□□□□ -0.07
RABGGTA-221ENST00000561055 VWDEQ8N2E2 1590 aa14.6□□□□□ -0.07
RABGGTA-221ENST00000561055 GGT6Q6P531 493 aa14.6□□□□□ -0.07
RABGGTA-221ENST00000561055 ILDR1Q86SU0 546 aaPredicted RBP14.6□□□□□ -0.07
RABGGTA-221ENST00000561055 UNC13BO14795 1591 aa14.6□□□□□ -0.07
RABGGTA-221ENST00000561055 HFM1A2PYH4 1435 aa14.58□□□□□ -0.07
RABGGTA-221ENST00000561055 NAIPQ13075 1403 aa14.58□□□□□ -0.07
RABGGTA-221ENST00000561055 CFAP65Q6ZU64 1925 aaKnown RBP14.57□□□□□ -0.08
RABGGTA-221ENST00000561055 ABCC3O15438 1527 aa14.56□□□□□ -0.08
RABGGTA-221ENST00000561055 CAMSAP1Q5T5Y3 1602 aa14.56□□□□□ -0.08
RABGGTA-221ENST00000561055 ESF1Q9H501 851 aaKnown RBP14.56□□□□□ -0.08
RABGGTA-221ENST00000561055 LMTK2Q8IWU2 1503 aa14.56□□□□□ -0.08
RABGGTA-221ENST00000561055 ZMYM3Q14202 1370 aa14.55□□□□□ -0.08
RABGGTA-221ENST00000561055 WASHC2CQ9Y4E1 1318 aa14.54□□□□□ -0.08
RABGGTA-221ENST00000561055 IQGAP3Q86VI3 1631 aa14.54□□□□□ -0.08
RABGGTA-221ENST00000561055 KANK1Q14678 1352 aa14.53□□□□□ -0.08
RABGGTA-221ENST00000561055 TET3O43151 1660 aa14.52□□□□□ -0.08
RABGGTA-221ENST00000561055 PREX1Q8TCU6 1659 aa14.52□□□□□ -0.08
RABGGTA-221ENST00000561055 NPATQ14207 1427 aa14.52□□□□□ -0.08
RABGGTA-221ENST00000561055 ARHGAP31Q2M1Z3 1444 aa14.52□□□□□ -0.08
RABGGTA-221ENST00000561055 PZPP20742 1482 aa14.51□□□□□ -0.09
RABGGTA-221ENST00000561055 CEBPAP49715 358 aaPredicted RBP14.5□□□□□ -0.09
RABGGTA-221ENST00000561055 ACIN1Q9UKV3 1341 aaKnown RBP14.49□□□□□ -0.09
RABGGTA-221ENST00000561055 EFCAB6Q5THR3 1501 aa14.49□□□□□ -0.09
RABGGTA-221ENST00000561055 SPATA31D1Q6ZQQ2 1576 aa14.48□□□□□ -0.09
RABGGTA-221ENST00000561055 E9PCH4 1651 aa14.47□□□□□ -0.09
RABGGTA-221ENST00000561055 RPRD2Q5VT52 1461 aaKnown RBP14.47□□□□□ -0.09
RABGGTA-221ENST00000561055 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.47□□□□□ -0.093e-8■□□□□ 9.1
RABGGTA-221ENST00000561055 ZNF142P52746 1687 aaPredicted RBP14.46□□□□□ -0.09
RABGGTA-221ENST00000561055 SETD5Q9C0A6 1442 aa14.46□□□□□ -0.09
RABGGTA-221ENST00000561055 NUP155O75694 1391 aa14.45□□□□□ -0.1
RABGGTA-221ENST00000561055 MYO3AQ8NEV4 1616 aa14.44□□□□□ -0.1
RABGGTA-221ENST00000561055 HRCP23327 699 aa14.44□□□□□ -0.1
RABGGTA-221ENST00000561055 ERVK-7P63135 1459 aa14.44□□□□□ -0.1
RABGGTA-221ENST00000561055 LMTK3Q96Q04 1460 aa14.44□□□□□ -0.1
RABGGTA-221ENST00000561055 FBXO31Q5XUX0 539 aaPredicted RBP14.42□□□□□ -0.1
RABGGTA-221ENST00000561055 KDM5AP29375 1690 aaKnown RBP14.42□□□□□ -0.1
RABGGTA-221ENST00000561055 NOS1P29475 1434 aa14.41□□□□□ -0.1
RABGGTA-221ENST00000561055 TRIM26Q12899 539 aaPredicted RBP14.41□□□□□ -0.1
RABGGTA-221ENST00000561055 SPHKAPQ2M3C7 1700 aa14.41□□□□□ -0.1
RABGGTA-221ENST00000561055 UHRF1BP1Q6BDS2 1440 aa14.41□□□□□ -0.1
RABGGTA-221ENST00000561055 NLRP1Q9C000 1473 aa14.4□□□□□ -0.1
RABGGTA-221ENST00000561055 TNRQ92752 1358 aa14.4□□□□□ -0.1
RABGGTA-221ENST00000561055 RAB3GAP2Q9H2M9 1393 aa14.4□□□□□ -0.1
RABGGTA-221ENST00000561055 PLPPR3Q6T4P5 718 aa14.4□□□□□ -0.1
RABGGTA-221ENST00000561055 SYNMO15061 1565 aa14.39□□□□□ -0.11
RABGGTA-221ENST00000561055 CEP170BQ9Y4F5 1589 aaPredicted RBP14.39□□□□□ -0.11
RABGGTA-221ENST00000561055 PIK3C2BO00750 1634 aa14.39□□□□□ -0.11
RABGGTA-221ENST00000561055 UBR1Q8IWV7 1749 aa14.38□□□□□ -0.11
RABGGTA-221ENST00000561055 A2ML1A8K2U0 1454 aa14.38□□□□□ -0.11
RABGGTA-221ENST00000561055 TRIM52Q96A61 297 aa14.36□□□□□ -0.11
RABGGTA-221ENST00000561055 MYO5BQ9ULV0 1848 aa14.36□□□□□ -0.11
RABGGTA-221ENST00000561055 STRCQ7RTU9 1775 aa14.35□□□□□ -0.11
RABGGTA-221ENST00000561055 PTPRTO14522 1441 aa14.35□□□□□ -0.11
RABGGTA-221ENST00000561055 MPHOSPH9Q99550 1183 aa14.33□□□□□ -0.12
RABGGTA-221ENST00000561055 SLC4A1APQ9BWU0 796 aaKnown RBP14.33□□□□□ -0.12
RABGGTA-221ENST00000561055 SLC52A1Q9NWF4 448 aa14.33□□□□□ -0.12
RABGGTA-221ENST00000561055 KIF1BO60333 1816 aa14.33□□□□□ -0.12
RABGGTA-221ENST00000561055 UGGT1Q9NYU2 1555 aa14.33□□□□□ -0.12
RABGGTA-221ENST00000561055 POLR1AO95602 1720 aaPredicted RBP14.32□□□□□ -0.12
RABGGTA-221ENST00000561055 PLA2R1Q13018 1463 aa14.31□□□□□ -0.12
RABGGTA-221ENST00000561055 TRPM2O94759 1503 aa14.31□□□□□ -0.12
RABGGTA-221ENST00000561055 PKD2Q13563 968 aa14.31□□□□□ -0.12
RABGGTA-221ENST00000561055 IDI1Q13907 227 aa14.31□□□□□ -0.12
RABGGTA-221ENST00000561055 TMEM131LA2VDJ0 1609 aa14.3□□□□□ -0.12
RABGGTA-221ENST00000561055 THEMISQ8N1K5 641 aaPredicted RBP14.29□□□□□ -0.12
RABGGTA-221ENST00000561055 ADGRB3O60242 1522 aa14.29□□□□□ -0.12
RABGGTA-221ENST00000561055 CLTCL1P53675 1640 aa14.29□□□□□ -0.12
RABGGTA-221ENST00000561055 SLIT1O75093 1534 aa14.28□□□□□ -0.12
RABGGTA-221ENST00000561055 HSPA2P54652 639 aa14.28□□□□□ -0.12
RABGGTA-221ENST00000561055 ARHGAP23Q9P227 1491 aa14.27□□□□□ -0.12
RABGGTA-221ENST00000561055 NEURL4Q96JN8 1562 aa14.24□□□□□ -0.13
RABGGTA-221ENST00000561055 MED14O60244 1454 aa14.23□□□□□ -0.13
RABGGTA-221ENST00000561055 TMEM2Q9UHN6 1383 aa14.22□□□□□ -0.13
RABGGTA-221ENST00000561055 FOXD1Q16676 465 aa14.21□□□□□ -0.13
RABGGTA-221ENST00000561055 DMRT2Q9Y5R5 561 aa14.21□□□□□ -0.13
RABGGTA-221ENST00000561055 ANKRD30BQ9BXX2 1392 aa14.21□□□□□ -0.14
RABGGTA-221ENST00000561055 ANKLE2Q86XL3 938 aa14.2□□□□□ -0.14
RABGGTA-221ENST00000561055 FBXO41Q8TF61 875 aa14.2□□□□□ -0.14
RABGGTA-221ENST00000561055 STAG3Q9UJ98 1225 aa14.2□□□□□ -0.14
RABGGTA-221ENST00000561055 ZFYVE9O95405 1425 aa14.2□□□□□ -0.14
RABGGTA-221ENST00000561055 IQGAP1P46940 1657 aa14.2□□□□□ -0.14
RABGGTA-221ENST00000561055 PPLO60437 1756 aa14.19□□□□□ -0.14
RABGGTA-221ENST00000561055 IFT172Q9UG01 1749 aa14.19□□□□□ -0.14
RABGGTA-221ENST00000561055 CCDC144AA2RUR9 1427 aa14.19□□□□□ -0.14
RABGGTA-221ENST00000561055 SCAF11Q99590 1463 aaKnown RBP14.18□□□□□ -0.14
RABGGTA-221ENST00000561055 NCKAP5LQ9HCH0 1330 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms