RNA–Protein interactions for RNA: ENST00000561010.5

GABPB1-211, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 867 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-211ENST00000561010 ZNF518AQ6AHZ1 1483 aa11.82□□□□□ -0.52
GABPB1-211ENST00000561010 FYCO1Q9BQS8 1478 aa11.82□□□□□ -0.52
GABPB1-211ENST00000561010 SETD1BQ9UPS6 1966 aaKnown RBP11.81□□□□□ -0.52
GABPB1-211ENST00000561010 SAMD9LQ8IVG5 1584 aa11.81□□□□□ -0.52
GABPB1-211ENST00000561010 TRAPPC8Q9Y2L5 1435 aa11.81□□□□□ -0.52
GABPB1-211ENST00000561010 MYT1LQ9UL68 1186 aa11.8□□□□□ -0.52
GABPB1-211ENST00000561010 LHX8Q68G74 356 aa11.79□□□□□ -0.52
GABPB1-211ENST00000561010 FBXO3Q9UK99 471 aa11.79□□□□□ -0.52
GABPB1-211ENST00000561010 STRCQ7RTU9 1775 aa11.79□□□□□ -0.52
GABPB1-211ENST00000561010 SYCP2Q9BX26 1530 aa11.78□□□□□ -0.52
GABPB1-211ENST00000561010 CEBPAP49715 358 aaPredicted RBP11.78□□□□□ -0.52
GABPB1-211ENST00000561010 PRR29P0C7W0 189 aa11.76□□□□□ -0.53
GABPB1-211ENST00000561010 ZNF777Q9ULD5 760 aaPredicted RBP11.76□□□□□ -0.53
GABPB1-211ENST00000561010 REREQ9P2R6 1566 aa11.75□□□□□ -0.53
GABPB1-211ENST00000561010 MLH3Q9UHC1 1453 aa11.74□□□□□ -0.53
GABPB1-211ENST00000561010 GPATCH8Q9UKJ3 1502 aaKnown RBP11.74□□□□□ -0.53
GABPB1-211ENST00000561010 CLTCQ00610 1675 aaKnown RBP11.74□□□□□ -0.53
GABPB1-211ENST00000561010 TIAM1Q13009 1591 aa11.73□□□□□ -0.53
GABPB1-211ENST00000561010 INO80Q9ULG1 1556 aaPredicted RBP11.72□□□□□ -0.53
GABPB1-211ENST00000561010 ADGBQ8N7X0 1667 aa11.71□□□□□ -0.53
GABPB1-211ENST00000561010 HNRNPMP52272 730 aaKnown RBP eCLIP11.71□□□□□ -0.53
GABPB1-211ENST00000561010 FARP1Q9Y4F1 1045 aaPredicted RBP11.71□□□□□ -0.53
GABPB1-211ENST00000561010 AGLP35573 1532 aa11.7□□□□□ -0.54
GABPB1-211ENST00000561010 ATP7AQ04656 1500 aa11.7□□□□□ -0.54
GABPB1-211ENST00000561010 CD44P16070 742 aaKnown RBP11.7□□□□□ -0.54
GABPB1-211ENST00000561010 FBXO41Q8TF61 875 aa11.7□□□□□ -0.54
GABPB1-211ENST00000561010 MROH2AA6NES4 1674 aa11.7□□□□□ -0.54
GABPB1-211ENST00000561010 CEP162Q5TB80 1403 aa11.69□□□□□ -0.54
GABPB1-211ENST00000561010 MTUS2Q5JR59 1369 aa11.68□□□□□ -0.54
GABPB1-211ENST00000561010 EHBP1L1Q8N3D4 1523 aa11.68□□□□□ -0.54
GABPB1-211ENST00000561010 CFAP65Q6ZU64 1925 aaKnown RBP11.68□□□□□ -0.54
GABPB1-211ENST00000561010 CCNB3Q8WWL7 1395 aa11.67□□□□□ -0.54
GABPB1-211ENST00000561010 ZNF644Q9H582 1327 aaPredicted RBP11.67□□□□□ -0.54
GABPB1-211ENST00000561010 PLXNC1O60486 1568 aa11.67□□□□□ -0.54
GABPB1-211ENST00000561010 SPAG9O60271 1321 aaKnown RBP11.66□□□□□ -0.54
GABPB1-211ENST00000561010 CFDP1Q9UEE9 299 aaPredicted RBP11.66□□□□□ -0.54
GABPB1-211ENST00000561010 UHRF1BP1Q6BDS2 1440 aa11.66□□□□□ -0.54
GABPB1-211ENST00000561010 MYO3AQ8NEV4 1616 aa11.64□□□□□ -0.55
GABPB1-211ENST00000561010 LOC105371045A0A1W2PR82 267 aa11.63□□□□□ -0.55
GABPB1-211ENST00000561010 ESF1Q9H501 851 aaKnown RBP11.63□□□□□ -0.55
GABPB1-211ENST00000561010 STAG3Q9UJ98 1225 aa11.63□□□□□ -0.55
GABPB1-211ENST00000561010 A2MP01023 1474 aa11.63□□□□□ -0.55
GABPB1-211ENST00000561010 PLEKHH2Q8IVE3 1493 aa11.63□□□□□ -0.55
GABPB1-211ENST00000561010 ZNF142P52746 1687 aaPredicted RBP11.62□□□□□ -0.55
GABPB1-211ENST00000561010 KIAA1107Q9UPP5 1409 aa11.61□□□□□ -0.55
GABPB1-211ENST00000561010 CERKQ8TCT0 537 aa11.61□□□□□ -0.55
GABPB1-211ENST00000561010 CAMSAP2Q08AD1 1489 aa11.61□□□□□ -0.55
GABPB1-211ENST00000561010 NCOA2Q15596 1464 aa11.61□□□□□ -0.55
GABPB1-211ENST00000561010 MBD5Q9P267 1494 aa11.61□□□□□ -0.55
GABPB1-211ENST00000561010 CAMSAP1Q5T5Y3 1602 aa11.6□□□□□ -0.55
GABPB1-211ENST00000561010 CNTLNQ9NXG0 1405 aa11.6□□□□□ -0.55
GABPB1-211ENST00000561010 VASPP50552 380 aaPredicted RBP11.59□□□□□ -0.55
GABPB1-211ENST00000561010 GGT6Q6P531 493 aa11.59□□□□□ -0.55
GABPB1-211ENST00000561010 CREBZFQ9NS37 354 aa11.59□□□□□ -0.55
GABPB1-211ENST00000561010 ZMYM3Q14202 1370 aa11.58□□□□□ -0.56
GABPB1-211ENST00000561010 POLR1AO95602 1720 aaPredicted RBP11.57□□□□□ -0.56
GABPB1-211ENST00000561010 NCOA1Q15788 1441 aa11.57□□□□□ -0.56
GABPB1-211ENST00000561010 CEP170BQ9Y4F5 1589 aaPredicted RBP11.57□□□□□ -0.56
GABPB1-211ENST00000561010 CEP152O94986 1710 aa11.56□□□□□ -0.56
GABPB1-211ENST00000561010 LTBP4Q8N2S1 1624 aa11.56□□□□□ -0.56
GABPB1-211ENST00000561010 NPATQ14207 1427 aa11.55□□□□□ -0.56
GABPB1-211ENST00000561010 PTPRKQ15262 1439 aa11.55□□□□□ -0.56
GABPB1-211ENST00000561010 ZNF579Q8NAF0 562 aaKnown RBP11.55□□□□□ -0.56
GABPB1-211ENST00000561010 CCDC141Q6ZP82 1450 aa11.55□□□□□ -0.56
GABPB1-211ENST00000561010 ARHGEF5Q12774 1597 aa11.54□□□□□ -0.56
GABPB1-211ENST00000561010 VPS8Q8N3P4 1428 aa11.54□□□□□ -0.56
GABPB1-211ENST00000561010 LRRC9Q6ZRR7 1453 aa11.54□□□□□ -0.56
GABPB1-211ENST00000561010 NCKAP5LQ9HCH0 1330 aa11.54□□□□□ -0.56
GABPB1-211ENST00000561010 DNMT1P26358 1616 aaKnown RBP11.53□□□□□ -0.56
GABPB1-211ENST00000561010 PTPRTO14522 1441 aa11.53□□□□□ -0.56
GABPB1-211ENST00000561010 CROCC2H7BZ55 1655 aa11.52□□□□□ -0.56
GABPB1-211ENST00000561010 KANK4Q5T7N3 995 aaPredicted RBP11.52□□□□□ -0.57
GABPB1-211ENST00000561010 RTEL1-TNFRSF6BF6WH68 1400 aa11.52□□□□□ -0.57
GABPB1-211ENST00000561010 KIF3BO15066 747 aa11.51□□□□□ -0.57
GABPB1-211ENST00000561010 DHX29Q7Z478 1369 aaKnown RBP11.51□□□□□ -0.57
GABPB1-211ENST00000561010 KDM5DQ9BY66 1539 aa11.5□□□□□ -0.57
GABPB1-211ENST00000561010 RNF17Q9BXT8 1623 aaKnown RBP11.5□□□□□ -0.57
GABPB1-211ENST00000561010 FBXO31Q5XUX0 539 aaPredicted RBP11.5□□□□□ -0.57
GABPB1-211ENST00000561010 GALR2O43603 387 aaPredicted RBP11.49□□□□□ -0.57
GABPB1-211ENST00000561010 NEURL4Q96JN8 1562 aa11.49□□□□□ -0.57
GABPB1-211ENST00000561010 MAST1Q9Y2H9 1570 aa11.49□□□□□ -0.57
GABPB1-211ENST00000561010 MROH1Q8NDA8 1641 aa11.49□□□□□ -0.57
GABPB1-211ENST00000561010 ZNF335Q9H4Z2 1342 aaPredicted RBP11.48□□□□□ -0.57
GABPB1-211ENST00000561010 A2ML1A8K2U0 1454 aa11.47□□□□□ -0.57
GABPB1-211ENST00000561010 TCOF1Q13428 1488 aaKnown RBP11.47□□□□□ -0.57
GABPB1-211ENST00000561010 POTEB2H3BUK9 544 aa11.47□□□□□ -0.57
GABPB1-211ENST00000561010 PLCD3Q8N3E9 789 aa11.47□□□□□ -0.57
GABPB1-211ENST00000561010 STRCP1A6NGW2 1772 aa11.46□□□□□ -0.57
GABPB1-211ENST00000561010 ZC3H13Q5T200 1668 aaKnown RBP11.46□□□□□ -0.57
GABPB1-211ENST00000561010 PTPN23Q9H3S7 1636 aa11.46□□□□□ -0.57
GABPB1-211ENST00000561010 EIF2AK4Q9P2K8 1649 aaKnown RBP11.46□□□□□ -0.57
GABPB1-211ENST00000561010 PZPP20742 1482 aa11.46□□□□□ -0.57
GABPB1-211ENST00000561010 PLA2R1Q13018 1463 aa11.46□□□□□ -0.57
GABPB1-211ENST00000561010 ZRANB1Q9UGI0 708 aa11.46□□□□□ -0.57
GABPB1-211ENST00000561010 MYOM3Q5VTT5 1437 aa11.45□□□□□ -0.58
GABPB1-211ENST00000561010 TNRQ92752 1358 aa11.45□□□□□ -0.58
GABPB1-211ENST00000561010 ABCC3O15438 1527 aa11.45□□□□□ -0.58
GABPB1-211ENST00000561010 MAP3K1Q13233 1512 aa11.45□□□□□ -0.58
GABPB1-211ENST00000561010 PLEKHG5O94827 1062 aa11.44□□□□□ -0.58
GABPB1-211ENST00000561010 MIER1Q8N108 512 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms