RNA–Protein interactions for RNA: ENST00000560899.5

ETFA-218, Transcript of electron transfer flavoprotein subunit alpha, humanhuman

TSL 5

Gene ETFA, Length 910 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ETFA-218ENST00000560899 ZC3H13Q5T200 1668 aaKnown RBP26.59■■□□□ 1.85
ETFA-218ENST00000560899 ANKRD30AQ9BXX3 1397 aa26.58■■□□□ 1.85
ETFA-218ENST00000560899 NPATQ14207 1427 aa26.58■■□□□ 1.85
ETFA-218ENST00000560899 GGT6Q6P531 493 aa26.58■■□□□ 1.85
ETFA-218ENST00000560899 NCOA1Q15788 1441 aa26.57■■□□□ 1.84
ETFA-218ENST00000560899 MROH1Q8NDA8 1641 aa26.57■■□□□ 1.84
ETFA-218ENST00000560899 FAM50AQ14320 339 aaKnown RBP26.56■■□□□ 1.84
ETFA-218ENST00000560899 ZMYM3Q14202 1370 aa26.56■■□□□ 1.84
ETFA-218ENST00000560899 DEPDC5O75140 1603 aa26.55■■□□□ 1.84
ETFA-218ENST00000560899 CEBPAP49715 358 aaPredicted RBP26.54■■□□□ 1.84
ETFA-218ENST00000560899 RRBP1Q9P2E9 1410 aaKnown RBP26.54■■□□□ 1.84
ETFA-218ENST00000560899 PRDM15P57071 1507 aaPredicted RBP26.54■■□□□ 1.84
ETFA-218ENST00000560899 UHRF1BP1Q6BDS2 1440 aa26.49■■□□□ 1.83
ETFA-218ENST00000560899 ABCC3O15438 1527 aa26.49■■□□□ 1.83
ETFA-218ENST00000560899 PTPRKQ15262 1439 aa26.48■■□□□ 1.83
ETFA-218ENST00000560899 ROCK1Q13464 1354 aa26.48■■□□□ 1.83
ETFA-218ENST00000560899 PLPPR3Q6T4P5 718 aa26.48■■□□□ 1.83
ETFA-218ENST00000560899 RRP7BPQ9NSQ0 103 aa26.48■■□□□ 1.83
ETFA-218ENST00000560899 PZPP20742 1482 aa26.48■■□□□ 1.83
ETFA-218ENST00000560899 PPARGC1BQ86YN6 1023 aaKnown RBP26.47■■□□□ 1.83
ETFA-218ENST00000560899 ZNF142P52746 1687 aaPredicted RBP26.46■■□□□ 1.83
ETFA-218ENST00000560899 CHIC2Q9UKJ5 165 aa26.45■■□□□ 1.82
ETFA-218ENST00000560899 WASHC2CQ9Y4E1 1318 aa26.44■■□□□ 1.82
ETFA-218ENST00000560899 MYO3AQ8NEV4 1616 aa26.44■■□□□ 1.82
ETFA-218ENST00000560899 CEP152O94986 1710 aa26.44■■□□□ 1.82
ETFA-218ENST00000560899 CAMSAP1Q5T5Y3 1602 aa26.43■■□□□ 1.82
ETFA-218ENST00000560899 VWDEQ8N2E2 1590 aa26.41■■□□□ 1.82
ETFA-218ENST00000560899 ANKRD50Q9ULJ7 1429 aa26.4■■□□□ 1.82
ETFA-218ENST00000560899 LMTK2Q8IWU2 1503 aa26.38■■□□□ 1.81
ETFA-218ENST00000560899 ARHGAP31Q2M1Z3 1444 aa26.36■■□□□ 1.81
ETFA-218ENST00000560899 CEP170BQ9Y4F5 1589 aaPredicted RBP26.36■■□□□ 1.81
ETFA-218ENST00000560899 UNC13BO14795 1591 aa26.35■■□□□ 1.81
ETFA-218ENST00000560899 SPATA31D1Q6ZQQ2 1576 aa26.35■■□□□ 1.81
ETFA-218ENST00000560899 KANK1Q14678 1352 aa26.34■■□□□ 1.81
ETFA-218ENST00000560899 HSPA2P54652 639 aa26.32■■□□□ 1.8
ETFA-218ENST00000560899 TNRQ92752 1358 aa26.31■■□□□ 1.8
ETFA-218ENST00000560899 STRCQ7RTU9 1775 aa26.3■■□□□ 1.8
ETFA-218ENST00000560899 A2ML1A8K2U0 1454 aa26.3■■□□□ 1.8
ETFA-218ENST00000560899 ERVK-7P63135 1459 aa26.3■■□□□ 1.8
ETFA-218ENST00000560899 NLRP1Q9C000 1473 aa26.3■■□□□ 1.8
ETFA-218ENST00000560899 EFCAB6Q5THR3 1501 aa26.29■■□□□ 1.8
ETFA-218ENST00000560899 GCC2Q8IWJ2 1684 aa26.28■■□□□ 1.8
ETFA-218ENST00000560899 PLA2R1Q13018 1463 aa26.26■■□□□ 1.79
ETFA-218ENST00000560899 TET3O43151 1660 aa26.25■■□□□ 1.79
ETFA-218ENST00000560899 FBXO31Q5XUX0 539 aaPredicted RBP26.25■■□□□ 1.79
ETFA-218ENST00000560899 IQGAP3Q86VI3 1631 aa26.24■■□□□ 1.79
ETFA-218ENST00000560899 ITGAEP38570 1179 aa26.23■■□□□ 1.79
ETFA-218ENST00000560899 RPRD2Q5VT52 1461 aaKnown RBP26.23■■□□□ 1.79
ETFA-218ENST00000560899 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.22■■□□□ 1.797e-6■□□□□ 10.8
ETFA-218ENST00000560899 CFAP65Q6ZU64 1925 aaKnown RBP26.21■■□□□ 1.79
ETFA-218ENST00000560899 HFM1A2PYH4 1435 aa26.18■■□□□ 1.78
ETFA-218ENST00000560899 NAIPQ13075 1403 aa26.18■■□□□ 1.78
ETFA-218ENST00000560899 UGGT1Q9NYU2 1555 aa26.16■■□□□ 1.78
ETFA-218ENST00000560899 PTPRTO14522 1441 aa26.16■■□□□ 1.78
ETFA-218ENST00000560899 KDM5AP29375 1690 aaKnown RBP26.15■■□□□ 1.78
ETFA-218ENST00000560899 DMRT2Q9Y5R5 561 aa26.15■■□□□ 1.78
ETFA-218ENST00000560899 NOS1P29475 1434 aa26.14■■□□□ 1.78
ETFA-218ENST00000560899 POLR1AO95602 1720 aaPredicted RBP26.14■■□□□ 1.78
ETFA-218ENST00000560899 UBR1Q8IWV7 1749 aa26.13■■□□□ 1.77
ETFA-218ENST00000560899 SYNMO15061 1565 aa26.12■■□□□ 1.77
ETFA-218ENST00000560899 E9PCH4 1651 aa26.11■■□□□ 1.77
ETFA-218ENST00000560899 PKD2Q13563 968 aa26.1■■□□□ 1.77
ETFA-218ENST00000560899 NUP155O75694 1391 aa26.07■■□□□ 1.76
ETFA-218ENST00000560899 PIK3C2BO00750 1634 aa26.07■■□□□ 1.76
ETFA-218ENST00000560899 THEMISQ8N1K5 641 aaPredicted RBP26.07■■□□□ 1.76
ETFA-218ENST00000560899 NEURL4Q96JN8 1562 aa26.05■■□□□ 1.76
ETFA-218ENST00000560899 SLIT1O75093 1534 aa26.03■■□□□ 1.76
ETFA-218ENST00000560899 ADGRB3O60242 1522 aa26.01■■□□□ 1.75
ETFA-218ENST00000560899 MED14O60244 1454 aa26.01■■□□□ 1.75
ETFA-218ENST00000560899 ARHGAP23Q9P227 1491 aa26.01■■□□□ 1.75
ETFA-218ENST00000560899 SLC52A1Q9NWF4 448 aa26■■□□□ 1.75
ETFA-218ENST00000560899 NCKAP5LQ9HCH0 1330 aa25.98■■□□□ 1.75
ETFA-218ENST00000560899 SPHKAPQ2M3C7 1700 aa25.97■■□□□ 1.75
ETFA-218ENST00000560899 ANKLE2Q86XL3 938 aa25.96■■□□□ 1.75
ETFA-218ENST00000560899 IDI1Q13907 227 aa25.95■■□□□ 1.74
ETFA-218ENST00000560899 IQGAP1P46940 1657 aa25.95■■□□□ 1.74
ETFA-218ENST00000560899 SCAF11Q99590 1463 aaKnown RBP25.93■■□□□ 1.74
ETFA-218ENST00000560899 TMEM131LA2VDJ0 1609 aa25.92■■□□□ 1.74
ETFA-218ENST00000560899 ACIN1Q9UKV3 1341 aaKnown RBP25.92■■□□□ 1.74
ETFA-218ENST00000560899 LTBP4Q8N2S1 1624 aa25.91■■□□□ 1.74
ETFA-218ENST00000560899 TMEM2Q9UHN6 1383 aa25.91■■□□□ 1.74
ETFA-218ENST00000560899 NPHP4O75161 1426 aaPredicted RBP25.9■■□□□ 1.74
ETFA-218ENST00000560899 MYO5BQ9ULV0 1848 aa25.9■■□□□ 1.74
ETFA-218ENST00000560899 TRPM2O94759 1503 aa25.88■■□□□ 1.73
ETFA-218ENST00000560899 STAG3Q9UJ98 1225 aa25.86■■□□□ 1.73
ETFA-218ENST00000560899 SETD5Q9C0A6 1442 aa25.85■■□□□ 1.73
ETFA-218ENST00000560899 IQSEC2Q5JU85 1478 aa25.84■■□□□ 1.73
ETFA-218ENST00000560899 ZFYVE9O95405 1425 aa25.82■■□□□ 1.72
ETFA-218ENST00000560899 EID1Q9Y6B2 187 aa25.82■■□□□ 1.72
ETFA-218ENST00000560899 CERKQ8TCT0 537 aa25.81■■□□□ 1.72
ETFA-218ENST00000560899 TRIM52Q96A61 297 aa25.81■■□□□ 1.72
ETFA-218ENST00000560899 LTKP29376 864 aa25.8■■□□□ 1.72
ETFA-218ENST00000560899 CLTCL1P53675 1640 aa25.8■■□□□ 1.72
ETFA-218ENST00000560899 TXNDC2Q86VQ3 553 aa25.79■■□□□ 1.72
ETFA-218ENST00000560899 SLC4A1APQ9BWU0 796 aaKnown RBP25.78■■□□□ 1.72
ETFA-218ENST00000560899 ZNF335Q9H4Z2 1342 aaPredicted RBP25.78■■□□□ 1.72
ETFA-218ENST00000560899 CPS1P31327 1500 aa25.78■■□□□ 1.72
ETFA-218ENST00000560899 KIF1BO60333 1816 aa25.76■■□□□ 1.71
ETFA-218ENST00000560899 RAB3GAP2Q9H2M9 1393 aa25.75■■□□□ 1.71
ETFA-218ENST00000560899 RIMS2Q9UQ26 1411 aa25.74■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms