RNA–Protein interactions for RNA: ENST00000560856.5

SNRPA1-213, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-213ENST00000560856 C3P01024 1663 aa23.46■■□□□ 1.35
SNRPA1-213ENST00000560856 RRBP1Q9P2E9 1410 aaKnown RBP23.46■■□□□ 1.35
SNRPA1-213ENST00000560856 MROH2AA6NES4 1674 aa23.44■■□□□ 1.34
SNRPA1-213ENST00000560856 LMTK3Q96Q04 1460 aa23.44■■□□□ 1.34
SNRPA1-213ENST00000560856 CLTCQ00610 1675 aaKnown RBP23.44■■□□□ 1.34
SNRPA1-213ENST00000560856 RNF17Q9BXT8 1623 aaKnown RBP23.44■■□□□ 1.34
SNRPA1-213ENST00000560856 EIF2AK4Q9P2K8 1649 aaKnown RBP23.44■■□□□ 1.34
SNRPA1-213ENST00000560856 ERBINQ96RT1 1412 aa23.42■■□□□ 1.34
SNRPA1-213ENST00000560856 SETD1BQ9UPS6 1966 aaKnown RBP23.41■■□□□ 1.34
SNRPA1-213ENST00000560856 MROH1Q8NDA8 1641 aa23.41■■□□□ 1.34
SNRPA1-213ENST00000560856 FAM135AQ9P2D6 1515 aa23.4■■□□□ 1.34
SNRPA1-213ENST00000560856 WASHC2CQ9Y4E1 1318 aa23.38■■□□□ 1.33
SNRPA1-213ENST00000560856 KDM5DQ9BY66 1539 aa23.38■■□□□ 1.33
SNRPA1-213ENST00000560856 NPATQ14207 1427 aa23.37■■□□□ 1.33
SNRPA1-213ENST00000560856 ROCK1Q13464 1354 aa23.37■■□□□ 1.33
SNRPA1-213ENST00000560856 ABCC3O15438 1527 aa23.34■■□□□ 1.33
SNRPA1-213ENST00000560856 ITGAEP38570 1179 aa23.34■■□□□ 1.33
SNRPA1-213ENST00000560856 HSPA2P54652 639 aa23.33■■□□□ 1.33
SNRPA1-213ENST00000560856 ANKRD50Q9ULJ7 1429 aa23.33■■□□□ 1.32
SNRPA1-213ENST00000560856 PREX1Q8TCU6 1659 aa23.32■■□□□ 1.32
SNRPA1-213ENST00000560856 PRDM15P57071 1507 aaPredicted RBP23.32■■□□□ 1.32
SNRPA1-213ENST00000560856 DEPDC5O75140 1603 aa23.31■■□□□ 1.32
SNRPA1-213ENST00000560856 FBXO31Q5XUX0 539 aaPredicted RBP23.31■■□□□ 1.32
SNRPA1-213ENST00000560856 UHRF1BP1Q6BDS2 1440 aa23.31■■□□□ 1.32
SNRPA1-213ENST00000560856 PZPP20742 1482 aa23.3■■□□□ 1.32
SNRPA1-213ENST00000560856 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.27■■□□□ 1.322e-7■□□□□ 8
SNRPA1-213ENST00000560856 ZC3H13Q5T200 1668 aaKnown RBP23.27■■□□□ 1.32
SNRPA1-213ENST00000560856 VWDEQ8N2E2 1590 aa23.27■■□□□ 1.32
SNRPA1-213ENST00000560856 CEP152O94986 1710 aa23.25■■□□□ 1.31
SNRPA1-213ENST00000560856 ARHGAP31Q2M1Z3 1444 aa23.23■■□□□ 1.31
SNRPA1-213ENST00000560856 KANK1Q14678 1352 aa23.22■■□□□ 1.31
SNRPA1-213ENST00000560856 TNRQ92752 1358 aa23.22■■□□□ 1.31
SNRPA1-213ENST00000560856 LMTK2Q8IWU2 1503 aa23.22■■□□□ 1.31
SNRPA1-213ENST00000560856 CAMSAP1Q5T5Y3 1602 aa23.21■■□□□ 1.31
SNRPA1-213ENST00000560856 MYO3AQ8NEV4 1616 aa23.19■■□□□ 1.3
SNRPA1-213ENST00000560856 SPATA31D1Q6ZQQ2 1576 aa23.18■■□□□ 1.3
SNRPA1-213ENST00000560856 ERVK-7P63135 1459 aa23.18■■□□□ 1.3
SNRPA1-213ENST00000560856 NAIPQ13075 1403 aa23.17■■□□□ 1.3
SNRPA1-213ENST00000560856 UNC13BO14795 1591 aa23.16■■□□□ 1.3
SNRPA1-213ENST00000560856 CEP170BQ9Y4F5 1589 aaPredicted RBP23.16■■□□□ 1.3
SNRPA1-213ENST00000560856 A2ML1A8K2U0 1454 aa23.16■■□□□ 1.3
SNRPA1-213ENST00000560856 ZNF142P52746 1687 aaPredicted RBP23.16■■□□□ 1.3
SNRPA1-213ENST00000560856 STRCQ7RTU9 1775 aa23.13■■□□□ 1.29
SNRPA1-213ENST00000560856 CFAP65Q6ZU64 1925 aaKnown RBP23.13■■□□□ 1.29
SNRPA1-213ENST00000560856 HFM1A2PYH4 1435 aa23.12■■□□□ 1.29
SNRPA1-213ENST00000560856 EFCAB6Q5THR3 1501 aa23.12■■□□□ 1.29
SNRPA1-213ENST00000560856 NLRP1Q9C000 1473 aa23.11■■□□□ 1.29
SNRPA1-213ENST00000560856 NUP155O75694 1391 aa23.09■■□□□ 1.29
SNRPA1-213ENST00000560856 NOS1P29475 1434 aa23.08■■□□□ 1.29
SNRPA1-213ENST00000560856 GCC2Q8IWJ2 1684 aa23.07■■□□□ 1.28
SNRPA1-213ENST00000560856 PLA2R1Q13018 1463 aa23.07■■□□□ 1.28
SNRPA1-213ENST00000560856 IQGAP3Q86VI3 1631 aa23.07■■□□□ 1.28
SNRPA1-213ENST00000560856 TET3O43151 1660 aa23.06■■□□□ 1.28
SNRPA1-213ENST00000560856 RPRD2Q5VT52 1461 aaKnown RBP23.05■■□□□ 1.28
SNRPA1-213ENST00000560856 UGGT1Q9NYU2 1555 aa23.03■■□□□ 1.28
SNRPA1-213ENST00000560856 NCKAP5LQ9HCH0 1330 aa23.03■■□□□ 1.28
SNRPA1-213ENST00000560856 SYNMO15061 1565 aa23.02■■□□□ 1.28
SNRPA1-213ENST00000560856 PTPRTO14522 1441 aa23.02■■□□□ 1.28
SNRPA1-213ENST00000560856 THEMISQ8N1K5 641 aaPredicted RBP23.02■■□□□ 1.28
SNRPA1-213ENST00000560856 DMRT2Q9Y5R5 561 aa23.02■■□□□ 1.28
SNRPA1-213ENST00000560856 PKD2Q13563 968 aa23.01■■□□□ 1.27
SNRPA1-213ENST00000560856 IDI1Q13907 227 aa23.01■■□□□ 1.27
SNRPA1-213ENST00000560856 E9PCH4 1651 aa22.99■■□□□ 1.27
SNRPA1-213ENST00000560856 SLC52A1Q9NWF4 448 aa22.96■■□□□ 1.27
SNRPA1-213ENST00000560856 UBR1Q8IWV7 1749 aa22.96■■□□□ 1.27
SNRPA1-213ENST00000560856 PIK3C2BO00750 1634 aa22.94■■□□□ 1.26
SNRPA1-213ENST00000560856 ANKLE2Q86XL3 938 aa22.93■■□□□ 1.26
SNRPA1-213ENST00000560856 NEURL4Q96JN8 1562 aa22.93■■□□□ 1.26
SNRPA1-213ENST00000560856 ARHGAP23Q9P227 1491 aa22.92■■□□□ 1.26
SNRPA1-213ENST00000560856 TRIM52Q96A61 297 aa22.91■■□□□ 1.26
SNRPA1-213ENST00000560856 SLIT1O75093 1534 aa22.9■■□□□ 1.26
SNRPA1-213ENST00000560856 SETD5Q9C0A6 1442 aa22.9■■□□□ 1.26
SNRPA1-213ENST00000560856 MED14O60244 1454 aa22.89■■□□□ 1.25
SNRPA1-213ENST00000560856 KDM5AP29375 1690 aaKnown RBP22.89■■□□□ 1.25
SNRPA1-213ENST00000560856 LTKP29376 864 aa22.88■■□□□ 1.25
SNRPA1-213ENST00000560856 TMEM2Q9UHN6 1383 aa22.88■■□□□ 1.25
SNRPA1-213ENST00000560856 POLR1AO95602 1720 aaPredicted RBP22.87■■□□□ 1.25
SNRPA1-213ENST00000560856 ADGRB3O60242 1522 aa22.87■■□□□ 1.25
SNRPA1-213ENST00000560856 STAG3Q9UJ98 1225 aa22.86■■□□□ 1.25
SNRPA1-213ENST00000560856 SLC4A1APQ9BWU0 796 aaKnown RBP22.85■■□□□ 1.25
SNRPA1-213ENST00000560856 NPHP4O75161 1426 aaPredicted RBP22.84■■□□□ 1.25
SNRPA1-213ENST00000560856 TXNDC2Q86VQ3 553 aa22.84■■□□□ 1.25
SNRPA1-213ENST00000560856 SCAF11Q99590 1463 aaKnown RBP22.84■■□□□ 1.25
SNRPA1-213ENST00000560856 TMEM131LA2VDJ0 1609 aa22.82■■□□□ 1.24
SNRPA1-213ENST00000560856 RAB3GAP2Q9H2M9 1393 aa22.82■■□□□ 1.24
SNRPA1-213ENST00000560856 LTBP4Q8N2S1 1624 aa22.82■■□□□ 1.24
SNRPA1-213ENST00000560856 SPHKAPQ2M3C7 1700 aa22.81■■□□□ 1.24
SNRPA1-213ENST00000560856 MPHOSPH9Q99550 1183 aa22.8■■□□□ 1.24
SNRPA1-213ENST00000560856 ZNF335Q9H4Z2 1342 aaPredicted RBP22.8■■□□□ 1.24
SNRPA1-213ENST00000560856 CERKQ8TCT0 537 aa22.79■■□□□ 1.24
SNRPA1-213ENST00000560856 EID1Q9Y6B2 187 aa22.79■■□□□ 1.24
SNRPA1-213ENST00000560856 ZFYVE9O95405 1425 aa22.79■■□□□ 1.24
SNRPA1-213ENST00000560856 ACIN1Q9UKV3 1341 aaKnown RBP22.79■■□□□ 1.24
SNRPA1-213ENST00000560856 MYO5BQ9ULV0 1848 aa22.78■■□□□ 1.24
SNRPA1-213ENST00000560856 TRPM2O94759 1503 aa22.77■■□□□ 1.24
SNRPA1-213ENST00000560856 CHGAP10645 457 aaKnown RBP22.76■■□□□ 1.23
SNRPA1-213ENST00000560856 FOXD1Q16676 465 aa22.76■■□□□ 1.23
SNRPA1-213ENST00000560856 IQGAP1P46940 1657 aa22.76■■□□□ 1.23
SNRPA1-213ENST00000560856 HRCP23327 699 aa22.75■■□□□ 1.23
SNRPA1-213ENST00000560856 CLTCL1P53675 1640 aa22.75■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms