RNA–Protein interactions for RNA: ENST00000560779.5

RMDN3-210, Transcript of regulator of microtubule dynamics 3, humanhuman

TSL 3

Gene RMDN3, Length 572 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RMDN3-210ENST00000560779 ZC3H13Q5T200 1668 aaKnown RBP20.61■□□□□ 0.89
RMDN3-210ENST00000560779 ESF1Q9H501 851 aaKnown RBP20.61■□□□□ 0.89
RMDN3-210ENST00000560779 KIF3BO15066 747 aa20.6■□□□□ 0.89
RMDN3-210ENST00000560779 DEPDC5O75140 1603 aa20.6■□□□□ 0.89
RMDN3-210ENST00000560779 KDM5DQ9BY66 1539 aa20.59■□□□□ 0.89
RMDN3-210ENST00000560779 MROH1Q8NDA8 1641 aa20.58■□□□□ 0.89
RMDN3-210ENST00000560779 GGT6Q6P531 493 aa20.58■□□□□ 0.89
RMDN3-210ENST00000560779 PTPRKQ15262 1439 aa20.58■□□□□ 0.88
RMDN3-210ENST00000560779 ROCK1Q13464 1354 aa20.58■□□□□ 0.88
RMDN3-210ENST00000560779 CHIC2Q9UKJ5 165 aa20.57■□□□□ 0.88
RMDN3-210ENST00000560779 PRDM15P57071 1507 aaPredicted RBP20.57■□□□□ 0.88
RMDN3-210ENST00000560779 RRP7BPQ9NSQ0 103 aa20.56■□□□□ 0.88
RMDN3-210ENST00000560779 PREX1Q8TCU6 1659 aa20.56■□□□□ 0.88
RMDN3-210ENST00000560779 CEP152O94986 1710 aa20.53■□□□□ 0.88
RMDN3-210ENST00000560779 ZMYM3Q14202 1370 aa20.51■□□□□ 0.87
RMDN3-210ENST00000560779 ABCC3O15438 1527 aa20.51■□□□□ 0.87
RMDN3-210ENST00000560779 NPATQ14207 1427 aa20.51■□□□□ 0.87
RMDN3-210ENST00000560779 ANKRD50Q9ULJ7 1429 aa20.51■□□□□ 0.87
RMDN3-210ENST00000560779 CAMSAP1Q5T5Y3 1602 aa20.49■□□□□ 0.87
RMDN3-210ENST00000560779 GCC2Q8IWJ2 1684 aa20.48■□□□□ 0.87
RMDN3-210ENST00000560779 VWDEQ8N2E2 1590 aa20.48■□□□□ 0.87
RMDN3-210ENST00000560779 CEBPAP49715 358 aaPredicted RBP20.48■□□□□ 0.87
RMDN3-210ENST00000560779 WASHC2CQ9Y4E1 1318 aa20.48■□□□□ 0.87
RMDN3-210ENST00000560779 UNC13BO14795 1591 aa20.47■□□□□ 0.87
RMDN3-210ENST00000560779 PZPP20742 1482 aa20.47■□□□□ 0.87
RMDN3-210ENST00000560779 LMTK3Q96Q04 1460 aa20.47■□□□□ 0.87
RMDN3-210ENST00000560779 ITGAEP38570 1179 aa20.45■□□□□ 0.86
RMDN3-210ENST00000560779 PLPPR3Q6T4P5 718 aa20.45■□□□□ 0.86
RMDN3-210ENST00000560779 KANK1Q14678 1352 aa20.45■□□□□ 0.86
RMDN3-210ENST00000560779 LMTK2Q8IWU2 1503 aa20.44■□□□□ 0.86
RMDN3-210ENST00000560779 ZNF142P52746 1687 aaPredicted RBP20.43■□□□□ 0.86
RMDN3-210ENST00000560779 UHRF1BP1Q6BDS2 1440 aa20.43■□□□□ 0.86
RMDN3-210ENST00000560779 MYO3AQ8NEV4 1616 aa20.42■□□□□ 0.86
RMDN3-210ENST00000560779 CFAP65Q6ZU64 1925 aaKnown RBP20.41■□□□□ 0.86
RMDN3-210ENST00000560779 ARHGAP31Q2M1Z3 1444 aa20.41■□□□□ 0.86
RMDN3-210ENST00000560779 TET3O43151 1660 aa20.38■□□□□ 0.85
RMDN3-210ENST00000560779 IQGAP3Q86VI3 1631 aa20.38■□□□□ 0.85
RMDN3-210ENST00000560779 SPATA31D1Q6ZQQ2 1576 aa20.38■□□□□ 0.85
RMDN3-210ENST00000560779 HFM1A2PYH4 1435 aa20.38■□□□□ 0.85
RMDN3-210ENST00000560779 EFCAB6Q5THR3 1501 aa20.37■□□□□ 0.85
RMDN3-210ENST00000560779 NAIPQ13075 1403 aa20.37■□□□□ 0.85
RMDN3-210ENST00000560779 CEP170BQ9Y4F5 1589 aaPredicted RBP20.35■□□□□ 0.85
RMDN3-210ENST00000560779 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.35■□□□□ 0.85
RMDN3-210ENST00000560779 ERVK-7P63135 1459 aa20.35■□□□□ 0.85
RMDN3-210ENST00000560779 TNRQ92752 1358 aa20.34■□□□□ 0.85
RMDN3-210ENST00000560779 RPRD2Q5VT52 1461 aaKnown RBP20.32■□□□□ 0.84
RMDN3-210ENST00000560779 NLRP1Q9C000 1473 aa20.32■□□□□ 0.84
RMDN3-210ENST00000560779 A2ML1A8K2U0 1454 aa20.31■□□□□ 0.84
RMDN3-210ENST00000560779 FBXO31Q5XUX0 539 aaPredicted RBP20.3■□□□□ 0.84
RMDN3-210ENST00000560779 E9PCH4 1651 aa20.29■□□□□ 0.84
RMDN3-210ENST00000560779 STRCQ7RTU9 1775 aa20.27■□□□□ 0.84
RMDN3-210ENST00000560779 NUP155O75694 1391 aa20.26■□□□□ 0.83
RMDN3-210ENST00000560779 HSPA2P54652 639 aa20.26■□□□□ 0.83
RMDN3-210ENST00000560779 NOS1P29475 1434 aa20.25■□□□□ 0.83
RMDN3-210ENST00000560779 KDM5AP29375 1690 aaKnown RBP20.25■□□□□ 0.83
RMDN3-210ENST00000560779 PLA2R1Q13018 1463 aa20.24■□□□□ 0.83
RMDN3-210ENST00000560779 SYNMO15061 1565 aa20.24■□□□□ 0.83
RMDN3-210ENST00000560779 UBR1Q8IWV7 1749 aa20.23■□□□□ 0.83
RMDN3-210ENST00000560779 UGGT1Q9NYU2 1555 aa20.23■□□□□ 0.83
RMDN3-210ENST00000560779 POLR1AO95602 1720 aaPredicted RBP20.22■□□□□ 0.83
RMDN3-210ENST00000560779 ACIN1Q9UKV3 1341 aaKnown RBP20.21■□□□□ 0.83
RMDN3-210ENST00000560779 SPHKAPQ2M3C7 1700 aa20.2■□□□□ 0.82
RMDN3-210ENST00000560779 PIK3C2BO00750 1634 aa20.2■□□□□ 0.82
RMDN3-210ENST00000560779 SETD5Q9C0A6 1442 aa20.18■□□□□ 0.82
RMDN3-210ENST00000560779 THEMISQ8N1K5 641 aaPredicted RBP20.15■□□□□ 0.82
RMDN3-210ENST00000560779 SLC52A1Q9NWF4 448 aa20.14■□□□□ 0.81
RMDN3-210ENST00000560779 DMRT2Q9Y5R5 561 aa20.14■□□□□ 0.81
RMDN3-210ENST00000560779 ADGRB3O60242 1522 aa20.13■□□□□ 0.81
RMDN3-210ENST00000560779 PTPRTO14522 1441 aa20.13■□□□□ 0.81
RMDN3-210ENST00000560779 MYO5BQ9ULV0 1848 aa20.13■□□□□ 0.81
RMDN3-210ENST00000560779 PKD2Q13563 968 aa20.12■□□□□ 0.81
RMDN3-210ENST00000560779 TRIM52Q96A61 297 aa20.12■□□□□ 0.81
RMDN3-210ENST00000560779 SLIT1O75093 1534 aa20.12■□□□□ 0.81
RMDN3-210ENST00000560779 NEURL4Q96JN8 1562 aa20.1■□□□□ 0.81
RMDN3-210ENST00000560779 ARHGAP23Q9P227 1491 aa20.1■□□□□ 0.81
RMDN3-210ENST00000560779 TRPM2O94759 1503 aa20.09■□□□□ 0.81
RMDN3-210ENST00000560779 IDI1Q13907 227 aa20.09■□□□□ 0.81
RMDN3-210ENST00000560779 TMEM131LA2VDJ0 1609 aa20.09■□□□□ 0.81
RMDN3-210ENST00000560779 RAB3GAP2Q9H2M9 1393 aa20.08■□□□□ 0.81
RMDN3-210ENST00000560779 KIF1BO60333 1816 aa20.06■□□□□ 0.8
RMDN3-210ENST00000560779 MED14O60244 1454 aa20.06■□□□□ 0.8
RMDN3-210ENST00000560779 HRCP23327 699 aa20.06■□□□□ 0.8
RMDN3-210ENST00000560779 SLC4A1APQ9BWU0 796 aaKnown RBP20.06■□□□□ 0.8
RMDN3-210ENST00000560779 ANKLE2Q86XL3 938 aa20.05■□□□□ 0.8
RMDN3-210ENST00000560779 IQGAP1P46940 1657 aa20.05■□□□□ 0.8
RMDN3-210ENST00000560779 NCKAP5LQ9HCH0 1330 aa20.04■□□□□ 0.8
RMDN3-210ENST00000560779 STAG3Q9UJ98 1225 aa20.04■□□□□ 0.8
RMDN3-210ENST00000560779 CLTCL1P53675 1640 aa20.04■□□□□ 0.8
RMDN3-210ENST00000560779 TMEM2Q9UHN6 1383 aa20.03■□□□□ 0.8
RMDN3-210ENST00000560779 SCAF11Q99590 1463 aaKnown RBP20.03■□□□□ 0.8
RMDN3-210ENST00000560779 MPHOSPH9Q99550 1183 aa20■□□□□ 0.79
RMDN3-210ENST00000560779 NPHP4O75161 1426 aaPredicted RBP20■□□□□ 0.79
RMDN3-210ENST00000560779 EID1Q9Y6B2 187 aa19.98■□□□□ 0.79
RMDN3-210ENST00000560779 ZFYVE9O95405 1425 aa19.97■□□□□ 0.79
RMDN3-210ENST00000560779 RIMS2Q9UQ26 1411 aa19.94■□□□□ 0.78
RMDN3-210ENST00000560779 LTKP29376 864 aa19.94■□□□□ 0.78
RMDN3-210ENST00000560779 TXNDC2Q86VQ3 553 aa19.94■□□□□ 0.78
RMDN3-210ENST00000560779 HDGFP51858 240 aaKnown RBP19.93■□□□□ 0.78
RMDN3-210ENST00000560779 LTBP4Q8N2S1 1624 aa19.93■□□□□ 0.78
RMDN3-210ENST00000560779 CHGAP10645 457 aaKnown RBP19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms