RNA–Protein interactions for RNA: ENST00000560762.5

NIPA2-209, Transcript of NIPA magnesium transporter 2, human

TSL 5

Gene NIPA2, Length 534 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NIPA2-209	ENST00000560762	CEBPA	P49715	358 aa	Predicted RBP	33.58	■■■□□ 2.97
NIPA2-209	ENST00000560762	ERBIN	Q96RT1	1412 aa		33.57	■■■□□ 2.96
NIPA2-209	ENST00000560762	MROH2A	A6NES4	1674 aa		33.56	■■■□□ 2.96
NIPA2-209	ENST00000560762	RNF17	Q9BXT8	1623 aa	Known RBP	33.55	■■■□□ 2.96
NIPA2-209	ENST00000560762	C3	P01024	1663 aa		33.55	■■■□□ 2.96
NIPA2-209	ENST00000560762	CLTC	Q00610	1675 aa	Known RBP	33.54	■■■□□ 2.96
NIPA2-209	ENST00000560762	ZMYM3	Q14202	1370 aa		33.52	■■■□□ 2.96
NIPA2-209	ENST00000560762	FAM135A	Q9P2D6	1515 aa		33.52	■■■□□ 2.96
NIPA2-209	ENST00000560762	KDM5D	Q9BY66	1539 aa		33.49	■■■□□ 2.95
NIPA2-209	ENST00000560762	ROCK1	Q13464	1354 aa		33.48	■■■□□ 2.95
NIPA2-209	ENST00000560762	MROH1	Q8NDA8	1641 aa		33.48	■■■□□ 2.95
NIPA2-209	ENST00000560762	ITGAE	P38570	1179 aa		33.47	■■■□□ 2.95
NIPA2-209	ENST00000560762	WASHC2C	Q9Y4E1	1318 aa		33.45	■■■□□ 2.95
NIPA2-209	ENST00000560762	LMTK3	Q96Q04	1460 aa		33.44	■■■□□ 2.94
NIPA2-209	ENST00000560762	ANKRD50	Q9ULJ7	1429 aa		33.41	■■■□□ 2.94
NIPA2-209	ENST00000560762	PRDM15	P57071	1507 aa	Predicted RBP	33.41	■■■□□ 2.94
NIPA2-209	ENST00000560762	DEPDC5	O75140	1603 aa		33.4	■■■□□ 2.94
NIPA2-209	ENST00000560762	NPAT	Q14207	1427 aa		33.4	■■■□□ 2.94
NIPA2-209	ENST00000560762	ABCC3	O15438	1527 aa		33.39	■■■□□ 2.94
NIPA2-209	ENST00000560762	ZC3H13	Q5T200	1668 aa	Known RBP	33.38	■■■□□ 2.93
NIPA2-209	ENST00000560762	PREX1	Q8TCU6	1659 aa		33.36	■■■□□ 2.93
NIPA2-209	ENST00000560762	SETD1B	Q9UPS6	1966 aa	Known RBP	33.36	■■■□□ 2.93
NIPA2-209	ENST00000560762	PZP	P20742	1482 aa		33.33	■■■□□ 2.93
NIPA2-209	ENST00000560762	UHRF1BP1	Q6BDS2	1440 aa		33.32	■■■□□ 2.92
NIPA2-209	ENST00000560762	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	33.31	■■■□□ 2.92
NIPA2-209	ENST00000560762	CEP152	O94986	1710 aa		33.3	■■■□□ 2.92
NIPA2-209	ENST00000560762	KANK1	Q14678	1352 aa		33.28	■■■□□ 2.92
NIPA2-209	ENST00000560762	VWDE	Q8N2E2	1590 aa		33.28	■■■□□ 2.92
NIPA2-209	ENST00000560762	FBXO31	Q5XUX0	539 aa	Predicted RBP	33.26	■■■□□ 2.91
NIPA2-209	ENST00000560762	CAMSAP1	Q5T5Y3	1602 aa		33.26	■■■□□ 2.91
NIPA2-209	ENST00000560762	HSPA2	P54652	639 aa		33.24	■■■□□ 2.91
NIPA2-209	ENST00000560762	LMTK2	Q8IWU2	1503 aa		33.23	■■■□□ 2.91
NIPA2-209	ENST00000560762	UNC13B	O14795	1591 aa		33.21	■■■□□ 2.91
NIPA2-209	ENST00000560762	ARHGAP31	Q2M1Z3	1444 aa		33.2	■■■□□ 2.91
NIPA2-209	ENST00000560762	MYO3A	Q8NEV4	1616 aa		33.2	■■■□□ 2.9
NIPA2-209	ENST00000560762	TNR	Q92752	1358 aa		33.19	■■■□□ 2.9
NIPA2-209	ENST00000560762	NAIP	Q13075	1403 aa		33.19	■■■□□ 2.9
NIPA2-209	ENST00000560762	SPATA31D1	Q6ZQQ2	1576 aa		33.16	■■■□□ 2.9
NIPA2-209	ENST00000560762	HFM1	A2PYH4	1435 aa		33.15	■■■□□ 2.9
NIPA2-209	ENST00000560762	ERVK-7	P63135	1459 aa		33.15	■■■□□ 2.9
NIPA2-209	ENST00000560762	GCC2	Q8IWJ2	1684 aa		33.14	■■■□□ 2.9
NIPA2-209	ENST00000560762	ZNF142	P52746	1687 aa	Predicted RBP	33.13	■■■□□ 2.89
NIPA2-209	ENST00000560762	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	33.13	■■■□□ 2.89
NIPA2-209	ENST00000560762	EFCAB6	Q5THR3	1501 aa		33.12	■■■□□ 2.89
NIPA2-209	ENST00000560762	A2ML1	A8K2U0	1454 aa		33.09	■■■□□ 2.89
NIPA2-209	ENST00000560762	NLRP1	Q9C000	1473 aa		33.07	■■■□□ 2.88
NIPA2-209	ENST00000560762	IQGAP3	Q86VI3	1631 aa		33.06	■■■□□ 2.88
NIPA2-209	ENST00000560762	TET3	O43151	1660 aa		33.06	■■■□□ 2.88
NIPA2-209	ENST00000560762	NUP155	O75694	1391 aa		33.06	■■■□□ 2.88
NIPA2-209	ENST00000560762	CFAP65	Q6ZU64	1925 aa	Known RBP	33.04	■■■□□ 2.88
NIPA2-209	ENST00000560762	RPRD2	Q5VT52	1461 aa	Known RBP	33.02	■■■□□ 2.88
NIPA2-209	ENST00000560762	NOS1	P29475	1434 aa		32.99	■■■□□ 2.87
NIPA2-209	ENST00000560762	STRC	Q7RTU9	1775 aa		32.98	■■■□□ 2.87
NIPA2-209	ENST00000560762	PLA2R1	Q13018	1463 aa		32.95	■■■□□ 2.87
NIPA2-209	ENST00000560762	UGGT1	Q9NYU2	1555 aa		32.95	■■■□□ 2.86
NIPA2-209	ENST00000560762	SYNM	O15061	1565 aa		32.94	■■■□□ 2.86
NIPA2-209	ENST00000560762		E9PCH4	1651 aa		32.93	■■■□□ 2.86
NIPA2-209	ENST00000560762	THEMIS	Q8N1K5	641 aa	Predicted RBP	32.89	■■■□□ 2.86
NIPA2-209	ENST00000560762	DMRT2	Q9Y5R5	561 aa		32.86	■■■□□ 2.85
NIPA2-209	ENST00000560762	IDI1	Q13907	227 aa		32.85	■■■□□ 2.85
NIPA2-209	ENST00000560762	TRIM52	Q96A61	297 aa		32.85	■■■□□ 2.85
NIPA2-209	ENST00000560762	UBR1	Q8IWV7	1749 aa		32.85	■■■□□ 2.85
NIPA2-209	ENST00000560762	PIK3C2B	O00750	1634 aa		32.84	■■■□□ 2.85
NIPA2-209	ENST00000560762	NCKAP5L	Q9HCH0	1330 aa		32.84	■■■□□ 2.85
NIPA2-209	ENST00000560762	PKD2	Q13563	968 aa		32.84	■■■□□ 2.85
NIPA2-209	ENST00000560762	SETD5	Q9C0A6	1442 aa		32.84	■■■□□ 2.85
NIPA2-209	ENST00000560762	SLC52A1	Q9NWF4	448 aa		32.83	■■■□□ 2.85
NIPA2-209	ENST00000560762	PTPRT	O14522	1441 aa		32.83	■■■□□ 2.85
NIPA2-209	ENST00000560762	KDM5A	P29375	1690 aa	Known RBP	32.78	■■■□□ 2.84
NIPA2-209	ENST00000560762	ANKLE2	Q86XL3	938 aa		32.75	■■■□□ 2.83
NIPA2-209	ENST00000560762	ADGRB3	O60242	1522 aa		32.75	■■■□□ 2.83
NIPA2-209	ENST00000560762	POLR1A	O95602	1720 aa	Predicted RBP	32.74	■■■□□ 2.83
NIPA2-209	ENST00000560762	SLC4A1AP	Q9BWU0	796 aa	Known RBP	32.74	■■■□□ 2.83
NIPA2-209	ENST00000560762	STAG3	Q9UJ98	1225 aa		32.74	■■■□□ 2.83
NIPA2-209	ENST00000560762	NEURL4	Q96JN8	1562 aa		32.74	■■■□□ 2.83
NIPA2-209	ENST00000560762	ARHGAP23	Q9P227	1491 aa		32.74	■■■□□ 2.83
NIPA2-209	ENST00000560762	RAB3GAP2	Q9H2M9	1393 aa		32.73	■■■□□ 2.83
NIPA2-209	ENST00000560762	SLIT1	O75093	1534 aa		32.73	■■■□□ 2.83
NIPA2-209	ENST00000560762	ACIN1	Q9UKV3	1341 aa	Known RBP	32.72	■■■□□ 2.83
NIPA2-209	ENST00000560762	SPHKAP	Q2M3C7	1700 aa		32.71	■■■□□ 2.83
NIPA2-209	ENST00000560762	TMEM2	Q9UHN6	1383 aa		32.7	■■■□□ 2.82
NIPA2-209	ENST00000560762	MED14	O60244	1454 aa		32.68	■■■□□ 2.82
NIPA2-209	ENST00000560762	SCAF11	Q99590	1463 aa	Known RBP	32.66	■■■□□ 2.82
NIPA2-209	ENST00000560762	TMEM131L	A2VDJ0	1609 aa		32.66	■■■□□ 2.82
NIPA2-209	ENST00000560762	TRPM2	O94759	1503 aa		32.65	■■■□□ 2.82
NIPA2-209	ENST00000560762	NPHP4	O75161	1426 aa	Predicted RBP	32.64	■■■□□ 2.82
NIPA2-209	ENST00000560762	MPHOSPH9	Q99550	1183 aa		32.64	■■■□□ 2.82
NIPA2-209	ENST00000560762	LTK	P29376	864 aa		32.63	■■■□□ 2.81
NIPA2-209	ENST00000560762	TXNDC2	Q86VQ3	553 aa		32.62	■■■□□ 2.81
NIPA2-209	ENST00000560762	EID1	Q9Y6B2	187 aa		32.6	■■■□□ 2.81
NIPA2-209	ENST00000560762	MYO5B	Q9ULV0	1848 aa		32.59	■■■□□ 2.81
NIPA2-209	ENST00000560762	HRC	P23327	699 aa		32.59	■■■□□ 2.81
NIPA2-209	ENST00000560762	CHGA	P10645	457 aa	Known RBP	32.58	■■■□□ 2.81
NIPA2-209	ENST00000560762	IQGAP1	P46940	1657 aa		32.58	■■■□□ 2.81
NIPA2-209	ENST00000560762	CLTCL1	P53675	1640 aa		32.58	■■■□□ 2.81
NIPA2-209	ENST00000560762	FOXD1	Q16676	465 aa		32.57	■■■□□ 2.8
NIPA2-209	ENST00000560762	ZFYVE9	O95405	1425 aa		32.56	■■■□□ 2.8
NIPA2-209	ENST00000560762	RIMS2	Q9UQ26	1411 aa		32.52	■■■□□ 2.8
NIPA2-209	ENST00000560762	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	32.51	■■■□□ 2.8
NIPA2-209	ENST00000560762	LTBP4	Q8N2S1	1624 aa		32.51	■■■□□ 2.8

Retrieved 100 of 20,778 RNA–protein pairs in 416.7 ms