RNA–Protein interactions for RNA: ENST00000560269.1

HMBOX1-213, Transcript of homeobox containing 1, humanhuman

TSL 4

Gene HMBOX1, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-213ENST00000560269 SIGLEC1Q9BZZ2 1709 aa20.3■□□□□ 0.84
HMBOX1-213ENST00000560269 KDM5DQ9BY66 1539 aa20.28■□□□□ 0.84
HMBOX1-213ENST00000560269 MROH1Q8NDA8 1641 aa20.27■□□□□ 0.84
HMBOX1-213ENST00000560269 KIF3BO15066 747 aa20.27■□□□□ 0.84
HMBOX1-213ENST00000560269 PRDM15P57071 1507 aaPredicted RBP20.26■□□□□ 0.83
HMBOX1-213ENST00000560269 VWDEQ8N2E2 1590 aa20.24■□□□□ 0.83
HMBOX1-213ENST00000560269 IQGAP3Q86VI3 1631 aa20.24■□□□□ 0.83
HMBOX1-213ENST00000560269 TRIM52Q96A61 297 aa20.23■□□□□ 0.83
HMBOX1-213ENST00000560269 NUP155O75694 1391 aa20.21■□□□□ 0.83
HMBOX1-213ENST00000560269 PZPP20742 1482 aa20.21■□□□□ 0.83
HMBOX1-213ENST00000560269 DHX57Q6P158 1386 aaKnown RBP20.2■□□□□ 0.82
HMBOX1-213ENST00000560269 FAM135AQ9P2D6 1515 aa20.19■□□□□ 0.82
HMBOX1-213ENST00000560269 KANK1Q14678 1352 aa20.19■□□□□ 0.82
HMBOX1-213ENST00000560269 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.18■□□□□ 0.823e-10■□□□□ 10.3
HMBOX1-213ENST00000560269 GGT6Q6P531 493 aa20.17■□□□□ 0.82
HMBOX1-213ENST00000560269 LMTK2Q8IWU2 1503 aa20.17■□□□□ 0.82
HMBOX1-213ENST00000560269 ZC3H13Q5T200 1668 aaKnown RBP20.16■□□□□ 0.82
HMBOX1-213ENST00000560269 MPHOSPH9Q99550 1183 aa20.16■□□□□ 0.82
HMBOX1-213ENST00000560269 PPP6R1Q9UPN7 881 aa20.16■□□□□ 0.82
HMBOX1-213ENST00000560269 TET3O43151 1660 aa20.15■□□□□ 0.82
HMBOX1-213ENST00000560269 CEP152O94986 1710 aa20.15■□□□□ 0.82
HMBOX1-213ENST00000560269 ABCC3O15438 1527 aa20.14■□□□□ 0.81
HMBOX1-213ENST00000560269 ARID4BQ4LE39 1312 aaPredicted RBP20.14■□□□□ 0.81
HMBOX1-213ENST00000560269 SLC4A1APQ9BWU0 796 aaKnown RBP20.13■□□□□ 0.81
HMBOX1-213ENST00000560269 EFCAB6Q5THR3 1501 aa20.1■□□□□ 0.81
HMBOX1-213ENST00000560269 CAMSAP1Q5T5Y3 1602 aa20.09■□□□□ 0.81
HMBOX1-213ENST00000560269 WASHC2CQ9Y4E1 1318 aa20.09■□□□□ 0.81
HMBOX1-213ENST00000560269 E9PCH4 1651 aa20.09■□□□□ 0.81
HMBOX1-213ENST00000560269 CLTCQ00610 1675 aaKnown RBP20.08■□□□□ 0.81
HMBOX1-213ENST00000560269 MLECQ14165 292 aa20.08■□□□□ 0.81
HMBOX1-213ENST00000560269 PKD2Q13563 968 aa20.07■□□□□ 0.8
HMBOX1-213ENST00000560269 CCER1Q8TC90 406 aaPredicted RBP20.06■□□□□ 0.8
HMBOX1-213ENST00000560269 ARHGAP31Q2M1Z3 1444 aa20.05■□□□□ 0.8
HMBOX1-213ENST00000560269 MROH2AA6NES4 1674 aa20.05■□□□□ 0.8
HMBOX1-213ENST00000560269 FER1L4A9Z1Z3 1794 aa20.05■□□□□ 0.8
HMBOX1-213ENST00000560269 RPRD2Q5VT52 1461 aaKnown RBP20.05■□□□□ 0.8
HMBOX1-213ENST00000560269 CLSPNQ9HAW4 1339 aa20.04■□□□□ 0.8
HMBOX1-213ENST00000560269 ADAMTSL3P82987 1691 aa20.04■□□□□ 0.8
HMBOX1-213ENST00000560269 CNTLNQ9NXG0 1405 aa20.04■□□□□ 0.8
HMBOX1-213ENST00000560269 NPATQ14207 1427 aa20.02■□□□□ 0.79
HMBOX1-213ENST00000560269 FOXD1Q16676 465 aa20.01■□□□□ 0.79
HMBOX1-213ENST00000560269 ANKRD30BQ9BXX2 1392 aa20■□□□□ 0.79
HMBOX1-213ENST00000560269 SPHKAPQ2M3C7 1700 aa20■□□□□ 0.79
HMBOX1-213ENST00000560269 ESF1Q9H501 851 aaKnown RBP20■□□□□ 0.79
HMBOX1-213ENST00000560269 MADDQ8WXG6 1647 aa19.99■□□□□ 0.79
HMBOX1-213ENST00000560269 PTPRTO14522 1441 aa19.99■□□□□ 0.79
HMBOX1-213ENST00000560269 PLA2R1Q13018 1463 aa19.98■□□□□ 0.79
HMBOX1-213ENST00000560269 TRPM2O94759 1503 aa19.97■□□□□ 0.79
HMBOX1-213ENST00000560269 ZMYM3Q14202 1370 aa19.96■□□□□ 0.79
HMBOX1-213ENST00000560269 PREX1Q8TCU6 1659 aa19.96■□□□□ 0.79
HMBOX1-213ENST00000560269 NOS1P29475 1434 aa19.95■□□□□ 0.78
HMBOX1-213ENST00000560269 RIMS1Q86UR5 1692 aaKnown RBP19.95■□□□□ 0.78
HMBOX1-213ENST00000560269 C3P01024 1663 aa19.94■□□□□ 0.78
HMBOX1-213ENST00000560269 SPATA31D1Q6ZQQ2 1576 aa19.93■□□□□ 0.78
HMBOX1-213ENST00000560269 CFAP65Q6ZU64 1925 aaKnown RBP19.93■□□□□ 0.78
HMBOX1-213ENST00000560269 ERVK-7P63135 1459 aa19.92■□□□□ 0.78
HMBOX1-213ENST00000560269 SYNMO15061 1565 aa19.91■□□□□ 0.78
HMBOX1-213ENST00000560269 CCDC144AA2RUR9 1427 aa19.89■□□□□ 0.77
HMBOX1-213ENST00000560269 PIK3C2BO00750 1634 aa19.89■□□□□ 0.77
HMBOX1-213ENST00000560269 CLTCL1P53675 1640 aa19.89■□□□□ 0.77
HMBOX1-213ENST00000560269 FBXO31Q5XUX0 539 aaPredicted RBP19.88■□□□□ 0.77
HMBOX1-213ENST00000560269 SIN3AQ96ST3 1273 aa19.88■□□□□ 0.77
HMBOX1-213ENST00000560269 UGGT1Q9NYU2 1555 aa19.85■□□□□ 0.77
HMBOX1-213ENST00000560269 CEBPAP49715 358 aaPredicted RBP19.84■□□□□ 0.77
HMBOX1-213ENST00000560269 PTPRMP28827 1452 aa19.84■□□□□ 0.77
HMBOX1-213ENST00000560269 SLC52A1Q9NWF4 448 aa19.83■□□□□ 0.77
HMBOX1-213ENST00000560269 NEURL4Q96JN8 1562 aa19.83■□□□□ 0.76
HMBOX1-213ENST00000560269 KIF1BO60333 1816 aa19.82■□□□□ 0.76
HMBOX1-213ENST00000560269 NEUROD1Q13562 356 aa19.82■□□□□ 0.76
HMBOX1-213ENST00000560269 TNRQ92752 1358 aa19.82■□□□□ 0.76
HMBOX1-213ENST00000560269 KDM4FA0A1W2PPD8 638 aa19.8■□□□□ 0.76
HMBOX1-213ENST00000560269 SPATA31E1Q6ZUB1 1445 aa19.79■□□□□ 0.76
HMBOX1-213ENST00000560269 TIMELESSQ9UNS1 1208 aa19.79■□□□□ 0.76
HMBOX1-213ENST00000560269 IDI1Q13907 227 aa19.78■□□□□ 0.76
HMBOX1-213ENST00000560269 NLRP1Q9C000 1473 aa19.78■□□□□ 0.76
HMBOX1-213ENST00000560269 ADGRB3O60242 1522 aa19.77■□□□□ 0.76
HMBOX1-213ENST00000560269 TMEM131LA2VDJ0 1609 aa19.76■□□□□ 0.75
HMBOX1-213ENST00000560269 KDM5AP29375 1690 aaKnown RBP19.76■□□□□ 0.75
HMBOX1-213ENST00000560269 ZEB1P37275 1124 aaPredicted RBP19.76■□□□□ 0.75
HMBOX1-213ENST00000560269 MYO3AQ8NEV4 1616 aa19.76■□□□□ 0.75
HMBOX1-213ENST00000560269 TONSLQ96HA7 1378 aa19.75■□□□□ 0.75
HMBOX1-213ENST00000560269 SETD1BQ9UPS6 1966 aaKnown RBP19.74■□□□□ 0.75
HMBOX1-213ENST00000560269 PLPPR3Q6T4P5 718 aa19.73■□□□□ 0.75
HMBOX1-213ENST00000560269 MYO5BQ9ULV0 1848 aa19.72■□□□□ 0.75
HMBOX1-213ENST00000560269 UBR1Q8IWV7 1749 aa19.71■□□□□ 0.75
HMBOX1-213ENST00000560269 ZNF142P52746 1687 aaPredicted RBP19.71■□□□□ 0.75
HMBOX1-213ENST00000560269 L3MBTL2Q969R5 705 aa19.7■□□□□ 0.74
HMBOX1-213ENST00000560269 A2ML1A8K2U0 1454 aa19.7■□□□□ 0.74
HMBOX1-213ENST00000560269 IFT172Q9UG01 1749 aa19.7■□□□□ 0.74
HMBOX1-213ENST00000560269 CHGAP10645 457 aaKnown RBP19.68■□□□□ 0.74
HMBOX1-213ENST00000560269 RGL3Q3MIN7 710 aa19.68■□□□□ 0.74
HMBOX1-213ENST00000560269 CEP170BQ9Y4F5 1589 aaPredicted RBP19.68■□□□□ 0.74
HMBOX1-213ENST00000560269 PPLO60437 1756 aa19.67■□□□□ 0.74
HMBOX1-213ENST00000560269 RPGRIP1LQ68CZ1 1315 aa19.66■□□□□ 0.74
HMBOX1-213ENST00000560269 STAG3Q9UJ98 1225 aa19.65■□□□□ 0.74
HMBOX1-213ENST00000560269 NEXMIFQ5QGS0 1516 aa19.65■□□□□ 0.74
HMBOX1-213ENST00000560269 PPP1R15AO75807 674 aaPredicted RBP19.64■□□□□ 0.73
HMBOX1-213ENST00000560269 STAC3Q96MF2 364 aa19.64■□□□□ 0.73
HMBOX1-213ENST00000560269 UHRF1BP1Q6BDS2 1440 aa19.64■□□□□ 0.73
HMBOX1-213ENST00000560269 MYOM2P54296 1465 aa19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms