RNA–Protein interactions for RNA: ENST00000560004.5

RORA-212, Transcript of RAR related orphan receptor A, humanhuman

TSL 4

Gene RORA, Length 544 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RORA-212ENST00000560004 PRDM15P57071 1507 aaPredicted RBP17.26■□□□□ 0.35
RORA-212ENST00000560004 SETD5Q9C0A6 1442 aa17.23■□□□□ 0.35
RORA-212ENST00000560004 VWDEQ8N2E2 1590 aa17.23■□□□□ 0.35
RORA-212ENST00000560004 KDM5DQ9BY66 1539 aa17.21■□□□□ 0.35
RORA-212ENST00000560004 RAB3GAP2Q9H2M9 1393 aa17.21■□□□□ 0.35
RORA-212ENST00000560004 CEP152O94986 1710 aa17.2■□□□□ 0.34
RORA-212ENST00000560004 IQGAP3Q86VI3 1631 aa17.2■□□□□ 0.34
RORA-212ENST00000560004 ADAMTSL3P82987 1691 aa17.2■□□□□ 0.34
RORA-212ENST00000560004 ZC3H13Q5T200 1668 aaKnown RBP17.2■□□□□ 0.34
RORA-212ENST00000560004 FER1L4A9Z1Z3 1794 aa17.18■□□□□ 0.34
RORA-212ENST00000560004 PCGF6Q9BYE7 350 aa17.18■□□□□ 0.34
RORA-212ENST00000560004 FAM135AQ9P2D6 1515 aa17.17■□□□□ 0.34
RORA-212ENST00000560004 MADDQ8WXG6 1647 aa17.17■□□□□ 0.34
RORA-212ENST00000560004 ABCC3O15438 1527 aa17.16■□□□□ 0.34
RORA-212ENST00000560004 KIF3BO15066 747 aa17.16■□□□□ 0.34
RORA-212ENST00000560004 CLTCQ00610 1675 aaKnown RBP17.16■□□□□ 0.34
RORA-212ENST00000560004 LMTK2Q8IWU2 1503 aa17.15■□□□□ 0.34
RORA-212ENST00000560004 CAMSAP1Q5T5Y3 1602 aa17.14■□□□□ 0.33
RORA-212ENST00000560004 PZPP20742 1482 aa17.14■□□□□ 0.33
RORA-212ENST00000560004 MROH2AA6NES4 1674 aa17.13■□□□□ 0.33
RORA-212ENST00000560004 TET3O43151 1660 aa17.13■□□□□ 0.33
RORA-212ENST00000560004 RIMS1Q86UR5 1692 aaKnown RBP17.12■□□□□ 0.33
RORA-212ENST00000560004 EFCAB6Q5THR3 1501 aa17.11■□□□□ 0.33
RORA-212ENST00000560004 ARID4BQ4LE39 1312 aaPredicted RBP17.11■□□□□ 0.33
RORA-212ENST00000560004 GGT6Q6P531 493 aa17.09■□□□□ 0.33
RORA-212ENST00000560004 E9PCH4 1651 aa17.09■□□□□ 0.33
RORA-212ENST00000560004 HRCP23327 699 aa17.08■□□□□ 0.32
RORA-212ENST00000560004 MLECQ14165 292 aa17.08■□□□□ 0.32
RORA-212ENST00000560004 C3P01024 1663 aa17.07■□□□□ 0.32
RORA-212ENST00000560004 NUP155O75694 1391 aa17.07■□□□□ 0.32
RORA-212ENST00000560004 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.05■□□□□ 0.322e-6■■■□□ 14.7
RORA-212ENST00000560004 CNTLNQ9NXG0 1405 aa17.04■□□□□ 0.32
RORA-212ENST00000560004 KANK1Q14678 1352 aa17.04■□□□□ 0.32
RORA-212ENST00000560004 NPATQ14207 1427 aa17.04■□□□□ 0.32
RORA-212ENST00000560004 PPP6R1Q9UPN7 881 aa17.03■□□□□ 0.32
RORA-212ENST00000560004 PREX1Q8TCU6 1659 aa17.03■□□□□ 0.32
RORA-212ENST00000560004 ARHGAP31Q2M1Z3 1444 aa17.03■□□□□ 0.32
RORA-212ENST00000560004 SPHKAPQ2M3C7 1700 aa17.01■□□□□ 0.31
RORA-212ENST00000560004 WASHC2CQ9Y4E1 1318 aa17■□□□□ 0.31
RORA-212ENST00000560004 RPRD2Q5VT52 1461 aaKnown RBP17■□□□□ 0.31
RORA-212ENST00000560004 PLPPR3Q6T4P5 718 aa17■□□□□ 0.31
RORA-212ENST00000560004 SPATA31D1Q6ZQQ2 1576 aa17■□□□□ 0.31
RORA-212ENST00000560004 TRIM52Q96A61 297 aa17■□□□□ 0.31
RORA-212ENST00000560004 DHX57Q6P158 1386 aaKnown RBP17■□□□□ 0.31
RORA-212ENST00000560004 ACIN1Q9UKV3 1341 aaKnown RBP16.99■□□□□ 0.31
RORA-212ENST00000560004 KDM4FA0A1W2PPD8 638 aa16.99■□□□□ 0.31
RORA-212ENST00000560004 PTPRMP28827 1452 aa16.99■□□□□ 0.31
RORA-212ENST00000560004 SYNMO15061 1565 aa16.98■□□□□ 0.31
RORA-212ENST00000560004 ERVK-7P63135 1459 aa16.98■□□□□ 0.31
RORA-212ENST00000560004 ZMYM3Q14202 1370 aa16.97■□□□□ 0.31
RORA-212ENST00000560004 MPHOSPH9Q99550 1183 aa16.96■□□□□ 0.31
RORA-212ENST00000560004 CFAP65Q6ZU64 1925 aaKnown RBP16.96■□□□□ 0.3
RORA-212ENST00000560004 TRPM2O94759 1503 aa16.96■□□□□ 0.3
RORA-212ENST00000560004 NOS1P29475 1434 aa16.96■□□□□ 0.3
RORA-212ENST00000560004 SLC4A1APQ9BWU0 796 aaKnown RBP16.95■□□□□ 0.3
RORA-212ENST00000560004 PIK3C2BO00750 1634 aa16.95■□□□□ 0.3
RORA-212ENST00000560004 PTPRTO14522 1441 aa16.95■□□□□ 0.3
RORA-212ENST00000560004 PLA2R1Q13018 1463 aa16.94■□□□□ 0.3
RORA-212ENST00000560004 MYO3AQ8NEV4 1616 aa16.93■□□□□ 0.3
RORA-212ENST00000560004 UGGT1Q9NYU2 1555 aa16.93■□□□□ 0.3
RORA-212ENST00000560004 CLTCL1P53675 1640 aa16.92■□□□□ 0.3
RORA-212ENST00000560004 PKD2Q13563 968 aa16.92■□□□□ 0.3
RORA-212ENST00000560004 FOXD1Q16676 465 aa16.91■□□□□ 0.3
RORA-212ENST00000560004 ESF1Q9H501 851 aaKnown RBP16.91■□□□□ 0.3
RORA-212ENST00000560004 CEBPAP49715 358 aaPredicted RBP16.9■□□□□ 0.3
RORA-212ENST00000560004 ZNF142P52746 1687 aaPredicted RBP16.89■□□□□ 0.29
RORA-212ENST00000560004 FBXO31Q5XUX0 539 aaPredicted RBP16.89■□□□□ 0.29
RORA-212ENST00000560004 ANKRD30BQ9BXX2 1392 aa16.88■□□□□ 0.29
RORA-212ENST00000560004 TNRQ92752 1358 aa16.86■□□□□ 0.29
RORA-212ENST00000560004 MYO5BQ9ULV0 1848 aa16.84■□□□□ 0.29
RORA-212ENST00000560004 ADGRB3O60242 1522 aa16.84■□□□□ 0.29
RORA-212ENST00000560004 CEP170BQ9Y4F5 1589 aaPredicted RBP16.84■□□□□ 0.29
RORA-212ENST00000560004 KDM5AP29375 1690 aaKnown RBP16.84■□□□□ 0.29
RORA-212ENST00000560004 UBR1Q8IWV7 1749 aa16.84■□□□□ 0.29
RORA-212ENST00000560004 NLRP1Q9C000 1473 aa16.83■□□□□ 0.28
RORA-212ENST00000560004 KIF1BO60333 1816 aa16.82■□□□□ 0.28
RORA-212ENST00000560004 TMEM131LA2VDJ0 1609 aa16.82■□□□□ 0.28
RORA-212ENST00000560004 SETD1BQ9UPS6 1966 aaKnown RBP16.81■□□□□ 0.28
RORA-212ENST00000560004 NEURL4Q96JN8 1562 aa16.81■□□□□ 0.28
RORA-212ENST00000560004 CCDC144AA2RUR9 1427 aa16.8■□□□□ 0.28
RORA-212ENST00000560004 A2ML1A8K2U0 1454 aa16.8■□□□□ 0.28
RORA-212ENST00000560004 IFT172Q9UG01 1749 aa16.78■□□□□ 0.28
RORA-212ENST00000560004 LMTK3Q96Q04 1460 aa16.77■□□□□ 0.28
RORA-212ENST00000560004 SPATA31E1Q6ZUB1 1445 aa16.77■□□□□ 0.27
RORA-212ENST00000560004 UHRF1BP1Q6BDS2 1440 aa16.76■□□□□ 0.27
RORA-212ENST00000560004 IDI1Q13907 227 aa16.75■□□□□ 0.27
RORA-212ENST00000560004 SLC52A1Q9NWF4 448 aa16.75■□□□□ 0.27
RORA-212ENST00000560004 CLSPNQ9HAW4 1339 aa16.74■□□□□ 0.27
RORA-212ENST00000560004 PPLO60437 1756 aa16.74■□□□□ 0.27
RORA-212ENST00000560004 NEXMIFQ5QGS0 1516 aa16.73■□□□□ 0.27
RORA-212ENST00000560004 CCER1Q8TC90 406 aaPredicted RBP16.72■□□□□ 0.27
RORA-212ENST00000560004 SIN3AQ96ST3 1273 aa16.72■□□□□ 0.27
RORA-212ENST00000560004 SLIT1O75093 1534 aa16.71■□□□□ 0.27
RORA-212ENST00000560004 ARHGAP23Q9P227 1491 aa16.71■□□□□ 0.27
RORA-212ENST00000560004 ZFYVE9O95405 1425 aa16.7■□□□□ 0.26
RORA-212ENST00000560004 POLR1AO95602 1720 aaPredicted RBP16.68■□□□□ 0.26
RORA-212ENST00000560004 MYOM2P54296 1465 aa16.65■□□□□ 0.26
RORA-212ENST00000560004 TMEM2Q9UHN6 1383 aa16.64■□□□□ 0.26
RORA-212ENST00000560004 RIMS2Q9UQ26 1411 aa16.64■□□□□ 0.25
RORA-212ENST00000560004 STRCQ7RTU9 1775 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms