RNA–Protein interactions for RNA: ENST00000559931.5

SMAD6-204, Transcript of SMAD family member 6, humanhuman

TSL 3

Gene SMAD6, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-204ENST00000559931 ADAMTSL3P82987 1691 aa21.38■■□□□ 1.01
SMAD6-204ENST00000559931 AGLP35573 1532 aa21.36■■□□□ 1.01
SMAD6-204ENST00000559931 TRIM52Q96A61 297 aa21.36■■□□□ 1.01
SMAD6-204ENST00000559931 MADDQ8WXG6 1647 aa21.36■■□□□ 1.01
SMAD6-204ENST00000559931 ESF1Q9H501 851 aaKnown RBP21.35■■□□□ 1.01
SMAD6-204ENST00000559931 EIF2AK4Q9P2K8 1649 aaKnown RBP21.34■■□□□ 1.01
SMAD6-204ENST00000559931 FER1L4A9Z1Z3 1794 aa21.33■■□□□ 1.01
SMAD6-204ENST00000559931 RIMS1Q86UR5 1692 aaKnown RBP21.33■■□□□ 1
SMAD6-204ENST00000559931 RAB3GAP2Q9H2M9 1393 aa21.33■■□□□ 1
SMAD6-204ENST00000559931 KANK1Q14678 1352 aa21.31■■□□□ 1
SMAD6-204ENST00000559931 PLPPR3Q6T4P5 718 aa21.3■■□□□ 1
SMAD6-204ENST00000559931 WASHC2CQ9Y4E1 1318 aa21.29■■□□□ 1
SMAD6-204ENST00000559931 NUP155O75694 1391 aa21.28■■□□□ 1
SMAD6-204ENST00000559931 ACIN1Q9UKV3 1341 aaKnown RBP21.28■■□□□ 1
SMAD6-204ENST00000559931 PPP6R1Q9UPN7 881 aa21.27■■□□□ 1
SMAD6-204ENST00000559931 HRCP23327 699 aa21.26■□□□□ 0.99
SMAD6-204ENST00000559931 RNF17Q9BXT8 1623 aaKnown RBP21.26■□□□□ 0.99
SMAD6-204ENST00000559931 PTPRMP28827 1452 aa21.25■□□□□ 0.99
SMAD6-204ENST00000559931 DEPDC5O75140 1603 aa21.22■□□□□ 0.99
SMAD6-204ENST00000559931 UNC13BO14795 1591 aa21.22■□□□□ 0.99
SMAD6-204ENST00000559931 MROH1Q8NDA8 1641 aa21.2■□□□□ 0.98
SMAD6-204ENST00000559931 SLC4A1APQ9BWU0 796 aaKnown RBP21.2■□□□□ 0.98
SMAD6-204ENST00000559931 CLTCQ00610 1675 aaKnown RBP21.2■□□□□ 0.98
SMAD6-204ENST00000559931 PRDM15P57071 1507 aaPredicted RBP21.19■□□□□ 0.98
SMAD6-204ENST00000559931 CEBPAP49715 358 aaPredicted RBP21.19■□□□□ 0.98
SMAD6-204ENST00000559931 CEP152O94986 1710 aa21.18■□□□□ 0.98
SMAD6-204ENST00000559931 KDM5DQ9BY66 1539 aa21.17■□□□□ 0.98
SMAD6-204ENST00000559931 CNTLNQ9NXG0 1405 aa21.16■□□□□ 0.98
SMAD6-204ENST00000559931 MPHOSPH9Q99550 1183 aa21.16■□□□□ 0.98
SMAD6-204ENST00000559931 C3P01024 1663 aa21.15■□□□□ 0.98
SMAD6-204ENST00000559931 ABCC3O15438 1527 aa21.15■□□□□ 0.98
SMAD6-204ENST00000559931 FAM135AQ9P2D6 1515 aa21.15■□□□□ 0.98
SMAD6-204ENST00000559931 CFAP65Q6ZU64 1925 aaKnown RBP21.15■□□□□ 0.98
SMAD6-204ENST00000559931 IQGAP3Q86VI3 1631 aa21.15■□□□□ 0.98
SMAD6-204ENST00000559931 ZC3H13Q5T200 1668 aaKnown RBP21.14■□□□□ 0.97
SMAD6-204ENST00000559931 ZMYM3Q14202 1370 aa21.13■□□□□ 0.97
SMAD6-204ENST00000559931 PKD2Q13563 968 aa21.13■□□□□ 0.97
SMAD6-204ENST00000559931 VWDEQ8N2E2 1590 aa21.13■□□□□ 0.97
SMAD6-204ENST00000559931 MROH2AA6NES4 1674 aa21.12■□□□□ 0.97
SMAD6-204ENST00000559931 PZPP20742 1482 aa21.11■□□□□ 0.97
SMAD6-204ENST00000559931 TET3O43151 1660 aa21.1■□□□□ 0.97
SMAD6-204ENST00000559931 CAMSAP1Q5T5Y3 1602 aa21.1■□□□□ 0.97
SMAD6-204ENST00000559931 LMTK2Q8IWU2 1503 aa21.09■□□□□ 0.97
SMAD6-204ENST00000559931 FOXD1Q16676 465 aa21.08■□□□□ 0.97
SMAD6-204ENST00000559931 SETD1BQ9UPS6 1966 aaKnown RBP21.08■□□□□ 0.96
SMAD6-204ENST00000559931 FBXO31Q5XUX0 539 aaPredicted RBP21.07■□□□□ 0.96
SMAD6-204ENST00000559931 EFCAB6Q5THR3 1501 aa21.05■□□□□ 0.96
SMAD6-204ENST00000559931 E9PCH4 1651 aa21.04■□□□□ 0.96
SMAD6-204ENST00000559931 NPATQ14207 1427 aa21.04■□□□□ 0.96
SMAD6-204ENST00000559931 ARHGAP31Q2M1Z3 1444 aa21.04■□□□□ 0.96
SMAD6-204ENST00000559931 RPRD2Q5VT52 1461 aaKnown RBP21.01■□□□□ 0.95
SMAD6-204ENST00000559931 DHX57Q6P158 1386 aaKnown RBP20.99■□□□□ 0.95
SMAD6-204ENST00000559931 PREX1Q8TCU6 1659 aa20.99■□□□□ 0.95
SMAD6-204ENST00000559931 CCER1Q8TC90 406 aaPredicted RBP20.98■□□□□ 0.95
SMAD6-204ENST00000559931 ERVK-7P63135 1459 aa20.96■□□□□ 0.95
SMAD6-204ENST00000559931 TNRQ92752 1358 aa20.96■□□□□ 0.95
SMAD6-204ENST00000559931 SPHKAPQ2M3C7 1700 aa20.94■□□□□ 0.94
SMAD6-204ENST00000559931 UHRF1BP1Q6BDS2 1440 aa20.94■□□□□ 0.94
SMAD6-204ENST00000559931 LMTK3Q96Q04 1460 aa20.94■□□□□ 0.94
SMAD6-204ENST00000559931 HSPA2P54652 639 aa20.92■□□□□ 0.94
SMAD6-204ENST00000559931 SLC52A1Q9NWF4 448 aa20.92■□□□□ 0.94
SMAD6-204ENST00000559931 STAG3Q9UJ98 1225 aa20.92■□□□□ 0.94
SMAD6-204ENST00000559931 NOS1P29475 1434 aa20.92■□□□□ 0.94
SMAD6-204ENST00000559931 PTPRTO14522 1441 aa20.91■□□□□ 0.94
SMAD6-204ENST00000559931 CHGAP10645 457 aaKnown RBP20.91■□□□□ 0.94
SMAD6-204ENST00000559931 SPATA31D1Q6ZQQ2 1576 aa20.91■□□□□ 0.94
SMAD6-204ENST00000559931 MYO3AQ8NEV4 1616 aa20.9■□□□□ 0.94
SMAD6-204ENST00000559931 ANKRD30BQ9BXX2 1392 aa20.9■□□□□ 0.94
SMAD6-204ENST00000559931 IDI1Q13907 227 aa20.9■□□□□ 0.94
SMAD6-204ENST00000559931 PLA2R1Q13018 1463 aa20.88■□□□□ 0.93
SMAD6-204ENST00000559931 CCDC144AA2RUR9 1427 aa20.88■□□□□ 0.93
SMAD6-204ENST00000559931 SYNMO15061 1565 aa20.88■□□□□ 0.93
SMAD6-204ENST00000559931 NEUROD1Q13562 356 aa20.87■□□□□ 0.93
SMAD6-204ENST00000559931 TRPM2O94759 1503 aa20.87■□□□□ 0.93
SMAD6-204ENST00000559931 UGGT1Q9NYU2 1555 aa20.85■□□□□ 0.93
SMAD6-204ENST00000559931 SIN3AQ96ST3 1273 aa20.85■□□□□ 0.93
SMAD6-204ENST00000559931 NLRP1Q9C000 1473 aa20.84■□□□□ 0.93
SMAD6-204ENST00000559931 CEP170BQ9Y4F5 1589 aaPredicted RBP20.84■□□□□ 0.93
SMAD6-204ENST00000559931 ZNF142P52746 1687 aaPredicted RBP20.83■□□□□ 0.93
SMAD6-204ENST00000559931 CLTCL1P53675 1640 aa20.82■□□□□ 0.92
SMAD6-204ENST00000559931 ZNF326Q5BKZ1 582 aaKnown RBP20.82■□□□□ 0.92
SMAD6-204ENST00000559931 KIF1BO60333 1816 aa20.82■□□□□ 0.92
SMAD6-204ENST00000559931 A2ML1A8K2U0 1454 aa20.81■□□□□ 0.92
SMAD6-204ENST00000559931 RGL3Q3MIN7 710 aa20.81■□□□□ 0.92
SMAD6-204ENST00000559931 PIK3C2BO00750 1634 aa20.8■□□□□ 0.92
SMAD6-204ENST00000559931 THEMISQ8N1K5 641 aaPredicted RBP20.8■□□□□ 0.92
SMAD6-204ENST00000559931 CLSPNQ9HAW4 1339 aa20.79■□□□□ 0.92
SMAD6-204ENST00000559931 MYO5BQ9ULV0 1848 aa20.75■□□□□ 0.91
SMAD6-204ENST00000559931 STRCQ7RTU9 1775 aa20.74■□□□□ 0.91
SMAD6-204ENST00000559931 TMEM131LA2VDJ0 1609 aa20.74■□□□□ 0.91
SMAD6-204ENST00000559931 ADGRB3O60242 1522 aa20.73■□□□□ 0.91
SMAD6-204ENST00000559931 UBR1Q8IWV7 1749 aa20.73■□□□□ 0.91
SMAD6-204ENST00000559931 HDGFP51858 240 aaKnown RBP20.73■□□□□ 0.91
SMAD6-204ENST00000559931 NCKAP5LQ9HCH0 1330 aa20.72■□□□□ 0.91
SMAD6-204ENST00000559931 EID1Q9Y6B2 187 aa20.71■□□□□ 0.91
SMAD6-204ENST00000559931 NUTM2DQ5VT03 806 aaPredicted RBP20.7■□□□□ 0.9
SMAD6-204ENST00000559931 KDM2AQ9Y2K7 1162 aa20.7■□□□□ 0.9
SMAD6-204ENST00000559931 KDM5AP29375 1690 aaKnown RBP20.7■□□□□ 0.9
SMAD6-204ENST00000559931 PPP1R15AO75807 674 aaPredicted RBP20.69■□□□□ 0.9
SMAD6-204ENST00000559931 RPGRIP1LQ68CZ1 1315 aa20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms