RNA–Protein interactions for RNA: ENST00000559734.1

TRAF3-207, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-207ENST00000559734 MTUS2Q5JR59 1369 aa17.55■□□□□ 0.4
TRAF3-207ENST00000559734 TNRQ92752 1358 aa17.55■□□□□ 0.4
TRAF3-207ENST00000559734 FBXO31Q5XUX0 539 aaPredicted RBP17.55■□□□□ 0.4
TRAF3-207ENST00000559734 POLR1AO95602 1720 aaPredicted RBP17.55■□□□□ 0.4
TRAF3-207ENST00000559734 NEURL4Q96JN8 1562 aa17.54■□□□□ 0.4
TRAF3-207ENST00000559734 ZNF644Q9H582 1327 aaPredicted RBP17.54■□□□□ 0.4
TRAF3-207ENST00000559734 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.52■□□□□ 0.39
TRAF3-207ENST00000559734 KIF3BO15066 747 aa17.51■□□□□ 0.39
TRAF3-207ENST00000559734 ANKLE2Q86XL3 938 aa17.51■□□□□ 0.39
TRAF3-207ENST00000559734 DHX29Q7Z478 1369 aaKnown RBP17.5■□□□□ 0.39
TRAF3-207ENST00000559734 PZPP20742 1482 aa17.49■□□□□ 0.39
TRAF3-207ENST00000559734 TIAM1Q13009 1591 aa17.49■□□□□ 0.39
TRAF3-207ENST00000559734 KDM5DQ9BY66 1539 aa17.48■□□□□ 0.39
TRAF3-207ENST00000559734 MBD5Q9P267 1494 aa17.48■□□□□ 0.39
TRAF3-207ENST00000559734 VWDEQ8N2E2 1590 aa17.48■□□□□ 0.39
TRAF3-207ENST00000559734 WASHC2CQ9Y4E1 1318 aa17.47■□□□□ 0.39
TRAF3-207ENST00000559734 RTEL1-TNFRSF6BF6WH68 1400 aa17.47■□□□□ 0.39
TRAF3-207ENST00000559734 NPHP4O75161 1426 aaPredicted RBP17.47■□□□□ 0.39
TRAF3-207ENST00000559734 THEMISQ8N1K5 641 aaPredicted RBP17.46■□□□□ 0.39
TRAF3-207ENST00000559734 FAM135AQ9P2D6 1515 aa17.45■□□□□ 0.38
TRAF3-207ENST00000559734 UGGT1Q9NYU2 1555 aa17.45■□□□□ 0.38
TRAF3-207ENST00000559734 EHBP1L1Q8N3D4 1523 aa17.44■□□□□ 0.38
TRAF3-207ENST00000559734 MIA2Q96PC5 1412 aa17.43■□□□□ 0.38
TRAF3-207ENST00000559734 CCDC141Q6ZP82 1450 aa17.43■□□□□ 0.38
TRAF3-207ENST00000559734 NLRP1Q9C000 1473 aa17.43■□□□□ 0.38
TRAF3-207ENST00000559734 ALKQ9UM73 1620 aa17.43■□□□□ 0.38
TRAF3-207ENST00000559734 IQGAP1P46940 1657 aa17.4■□□□□ 0.38
TRAF3-207ENST00000559734 MED14O60244 1454 aa17.4■□□□□ 0.38
TRAF3-207ENST00000559734 DEPDC5O75140 1603 aa17.39■□□□□ 0.38
TRAF3-207ENST00000559734 CAMSAP2Q08AD1 1489 aa17.39■□□□□ 0.37
TRAF3-207ENST00000559734 CEP162Q5TB80 1403 aa17.38■□□□□ 0.37
TRAF3-207ENST00000559734 RNF17Q9BXT8 1623 aaKnown RBP17.38■□□□□ 0.37
TRAF3-207ENST00000559734 LRRC7Q96NW7 1537 aa17.37■□□□□ 0.37
TRAF3-207ENST00000559734 SYNMO15061 1565 aa17.35■□□□□ 0.37
TRAF3-207ENST00000559734 STRCP1A6NGW2 1772 aa17.35■□□□□ 0.37
TRAF3-207ENST00000559734 NCOA2Q15596 1464 aa17.33■□□□□ 0.37
TRAF3-207ENST00000559734 TSPY4P0CV99 314 aa17.33■□□□□ 0.36
TRAF3-207ENST00000559734 TSPY10P0CW01 314 aa17.33■□□□□ 0.36
TRAF3-207ENST00000559734 RSPH4AQ5TD94 716 aa17.33■□□□□ 0.36
TRAF3-207ENST00000559734 ABCC3O15438 1527 aa17.31■□□□□ 0.36
TRAF3-207ENST00000559734 ERVK-7P63135 1459 aa17.31■□□□□ 0.36
TRAF3-207ENST00000559734 RGS17Q9UGC6 210 aaPredicted RBP17.29■□□□□ 0.36
TRAF3-207ENST00000559734 ARHGEF5Q12774 1597 aa17.28■□□□□ 0.36
TRAF3-207ENST00000559734 SCAF11Q99590 1463 aaKnown RBP17.28■□□□□ 0.36
TRAF3-207ENST00000559734 ZC3H13Q5T200 1668 aaKnown RBP17.28■□□□□ 0.36
TRAF3-207ENST00000559734 TXNDC2Q86VQ3 553 aa17.25■□□□□ 0.35
TRAF3-207ENST00000559734 UBR1Q8IWV7 1749 aa17.24■□□□□ 0.35
TRAF3-207ENST00000559734 LTKP29376 864 aa17.24■□□□□ 0.35
TRAF3-207ENST00000559734 CEP152O94986 1710 aa17.24■□□□□ 0.35
TRAF3-207ENST00000559734 EID1Q9Y6B2 187 aa17.22■□□□□ 0.35
TRAF3-207ENST00000559734 EIF2AK4Q9P2K8 1649 aaKnown RBP17.21■□□□□ 0.35
TRAF3-207ENST00000559734 MROH1Q8NDA8 1641 aa17.21■□□□□ 0.35
TRAF3-207ENST00000559734 MAST1Q9Y2H9 1570 aa17.2■□□□□ 0.34
TRAF3-207ENST00000559734 POTEAQ6S8J7 498 aa17.2■□□□□ 0.34
TRAF3-207ENST00000559734 CFAP65Q6ZU64 1925 aaKnown RBP17.19■□□□□ 0.34
TRAF3-207ENST00000559734 ARHGAP23Q9P227 1491 aa17.19■□□□□ 0.34
TRAF3-207ENST00000559734 STAG3Q9UJ98 1225 aa17.19■□□□□ 0.34
TRAF3-207ENST00000559734 SLIT1O75093 1534 aa17.18■□□□□ 0.34
TRAF3-207ENST00000559734 XIRP1Q702N8 1843 aaKnown RBP17.18■□□□□ 0.34
TRAF3-207ENST00000559734 FAM135BQ49AJ0 1406 aa17.17■□□□□ 0.34
TRAF3-207ENST00000559734 TMEM94Q12767 1356 aa17.16■□□□□ 0.34
TRAF3-207ENST00000559734 RBM33Q96EV2 1170 aaKnown RBP17.16■□□□□ 0.34
TRAF3-207ENST00000559734 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.16■□□□□ 0.34
TRAF3-207ENST00000559734 DUOX2Q9NRD8 1548 aa17.15■□□□□ 0.34
TRAF3-207ENST00000559734 PIK3C2BO00750 1634 aa17.14■□□□□ 0.33
TRAF3-207ENST00000559734 TMEM2Q9UHN6 1383 aa17.14■□□□□ 0.33
TRAF3-207ENST00000559734 ROBO1Q9Y6N7 1651 aa17.13■□□□□ 0.33
TRAF3-207ENST00000559734 LRRC9Q6ZRR7 1453 aa17.13■□□□□ 0.33
TRAF3-207ENST00000559734 PROSER2Q86WR7 435 aaPredicted RBP17.13■□□□□ 0.33
TRAF3-207ENST00000559734 SLC26A8Q96RN1 970 aa17.12■□□□□ 0.33
TRAF3-207ENST00000559734 SETD1AO15047 1707 aaKnown RBP17.11■□□□□ 0.33
TRAF3-207ENST00000559734 KIF15Q9NS87 1388 aa17.11■□□□□ 0.33
TRAF3-207ENST00000559734 ARHGAP31Q2M1Z3 1444 aa17.11■□□□□ 0.33
TRAF3-207ENST00000559734 PRDM15P57071 1507 aaPredicted RBP17.11■□□□□ 0.33
TRAF3-207ENST00000559734 KCNA6P17658 529 aa17.1■□□□□ 0.33
TRAF3-207ENST00000559734 BCANQ96GW7 911 aa17.1■□□□□ 0.33
TRAF3-207ENST00000559734 RRP7BPQ9NSQ0 103 aa17.1■□□□□ 0.33
TRAF3-207ENST00000559734 MYOM3Q5VTT5 1437 aa17.1■□□□□ 0.33
TRAF3-207ENST00000559734 MAP3K1Q13233 1512 aa17.1■□□□□ 0.33
TRAF3-207ENST00000559734 EFCAB6Q5THR3 1501 aa17.09■□□□□ 0.33
TRAF3-207ENST00000559734 KANK1Q14678 1352 aa17.08■□□□□ 0.32
TRAF3-207ENST00000559734 ERBINQ96RT1 1412 aa17.07■□□□□ 0.32
TRAF3-207ENST00000559734 KANK4Q5T7N3 995 aaPredicted RBP17.07■□□□□ 0.32
TRAF3-207ENST00000559734 MSH6P52701 1360 aa17.06■□□□□ 0.32
TRAF3-207ENST00000559734 IDI1Q13907 227 aa17.06■□□□□ 0.32
TRAF3-207ENST00000559734 VPS8Q8N3P4 1428 aa17.04■□□□□ 0.32
TRAF3-207ENST00000559734 JCADQ9P266 1359 aa17.04■□□□□ 0.32
TRAF3-207ENST00000559734 NKTRP30414 1462 aaKnown RBP17.04■□□□□ 0.32
TRAF3-207ENST00000559734 PHLPP1O60346 1717 aa17.04■□□□□ 0.32
TRAF3-207ENST00000559734 TET3O43151 1660 aa17.02■□□□□ 0.32
TRAF3-207ENST00000559734 MEX3CQ5U5Q3 659 aaKnown RBP17.02■□□□□ 0.32
TRAF3-207ENST00000559734 ABCC5O15440 1437 aa17.02■□□□□ 0.31
TRAF3-207ENST00000559734 NWD1Q149M9 1564 aa17.02■□□□□ 0.31
TRAF3-207ENST00000559734 CROCC2H7BZ55 1655 aa17.01■□□□□ 0.31
TRAF3-207ENST00000559734 TRIM52Q96A61 297 aa17.01■□□□□ 0.31
TRAF3-207ENST00000559734 SLAIN2Q9P270 581 aa17.01■□□□□ 0.31
TRAF3-207ENST00000559734 ADGRB3O60242 1522 aa17.01■□□□□ 0.31
TRAF3-207ENST00000559734 KDM5AP29375 1690 aaKnown RBP17■□□□□ 0.31
TRAF3-207ENST00000559734 C14orf37Q86TY3 774 aa16.99■□□□□ 0.31
TRAF3-207ENST00000559734 CHIC2Q9UKJ5 165 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms