RNA–Protein interactions for RNA: ENST00000559566.5

SHF-205, Transcript of Src homology 2 domain containing F, humanhuman

TSL 1 (best)

Gene SHF, Length 884 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHF-205ENST00000559566 CNTLNQ9NXG0 1405 aa29.8■■■□□ 2.36
SHF-205ENST00000559566 MROH1Q8NDA8 1641 aa29.8■■■□□ 2.36
SHF-205ENST00000559566 RNF17Q9BXT8 1623 aaKnown RBP29.8■■■□□ 2.36
SHF-205ENST00000559566 CLTCQ00610 1675 aaKnown RBP29.79■■■□□ 2.36
SHF-205ENST00000559566 ESF1Q9H501 851 aaKnown RBP29.78■■■□□ 2.36
SHF-205ENST00000559566 C3P01024 1663 aa29.77■■■□□ 2.36
SHF-205ENST00000559566 ROCK1Q13464 1354 aa29.77■■■□□ 2.36
SHF-205ENST00000559566 ZMYM3Q14202 1370 aa29.76■■■□□ 2.35
SHF-205ENST00000559566 PPP6R1Q9UPN7 881 aa29.75■■■□□ 2.35
SHF-205ENST00000559566 KDM5DQ9BY66 1539 aa29.73■■■□□ 2.35
SHF-205ENST00000559566 MROH2AA6NES4 1674 aa29.72■■■□□ 2.35
SHF-205ENST00000559566 ANKRD50Q9ULJ7 1429 aa29.71■■■□□ 2.35
SHF-205ENST00000559566 ABCC3O15438 1527 aa29.69■■■□□ 2.34
SHF-205ENST00000559566 PRDM15P57071 1507 aaPredicted RBP29.69■■■□□ 2.34
SHF-205ENST00000559566 WASHC2CQ9Y4E1 1318 aa29.69■■■□□ 2.34
SHF-205ENST00000559566 FAM135AQ9P2D6 1515 aa29.68■■■□□ 2.34
SHF-205ENST00000559566 DEPDC5O75140 1603 aa29.67■■■□□ 2.34
SHF-205ENST00000559566 LMTK3Q96Q04 1460 aa29.66■■■□□ 2.34
SHF-205ENST00000559566 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29.65■■■□□ 2.34
SHF-205ENST00000559566 VWDEQ8N2E2 1590 aa29.6■■■□□ 2.33
SHF-205ENST00000559566 CEP152O94986 1710 aa29.6■■■□□ 2.33
SHF-205ENST00000559566 FBXO31Q5XUX0 539 aaPredicted RBP29.6■■■□□ 2.33
SHF-205ENST00000559566 NPATQ14207 1427 aa29.59■■■□□ 2.33
SHF-205ENST00000559566 PZPP20742 1482 aa29.59■■■□□ 2.33
SHF-205ENST00000559566 ZC3H13Q5T200 1668 aaKnown RBP29.59■■■□□ 2.33
SHF-205ENST00000559566 NAIPQ13075 1403 aa29.58■■■□□ 2.33
SHF-205ENST00000559566 CAMSAP1Q5T5Y3 1602 aa29.55■■■□□ 2.32
SHF-205ENST00000559566 HSPA2P54652 639 aa29.54■■■□□ 2.32
SHF-205ENST00000559566 PREX1Q8TCU6 1659 aa29.53■■■□□ 2.32
SHF-205ENST00000559566 UNC13BO14795 1591 aa29.53■■■□□ 2.32
SHF-205ENST00000559566 LMTK2Q8IWU2 1503 aa29.53■■■□□ 2.32
SHF-205ENST00000559566 KANK1Q14678 1352 aa29.52■■■□□ 2.32
SHF-205ENST00000559566 UHRF1BP1Q6BDS2 1440 aa29.52■■■□□ 2.32
SHF-205ENST00000559566 HFM1A2PYH4 1435 aa29.51■■■□□ 2.31
SHF-205ENST00000559566 GCC2Q8IWJ2 1684 aa29.49■■■□□ 2.31
SHF-205ENST00000559566 ARHGAP31Q2M1Z3 1444 aa29.47■■■□□ 2.31
SHF-205ENST00000559566 TNRQ92752 1358 aa29.47■■■□□ 2.31
SHF-205ENST00000559566 ERVK-7P63135 1459 aa29.47■■■□□ 2.31
SHF-205ENST00000559566 MYO3AQ8NEV4 1616 aa29.46■■■□□ 2.31
SHF-205ENST00000559566 SPATA31D1Q6ZQQ2 1576 aa29.45■■■□□ 2.31
SHF-205ENST00000559566 SETD1BQ9UPS6 1966 aaKnown RBP29.43■■■□□ 2.3
SHF-205ENST00000559566 EFCAB6Q5THR3 1501 aa29.43■■■□□ 2.3
SHF-205ENST00000559566 NUP155O75694 1391 aa29.41■■■□□ 2.3
SHF-205ENST00000559566 IQGAP3Q86VI3 1631 aa29.4■■■□□ 2.3
SHF-205ENST00000559566 CEP170BQ9Y4F5 1589 aaPredicted RBP29.39■■■□□ 2.29
SHF-205ENST00000559566 TET3O43151 1660 aa29.37■■■□□ 2.29
SHF-205ENST00000559566 ZNF142P52746 1687 aaPredicted RBP29.37■■■□□ 2.29
SHF-205ENST00000559566 A2ML1A8K2U0 1454 aa29.36■■■□□ 2.29
SHF-205ENST00000559566 NOS1P29475 1434 aa29.33■■■□□ 2.29
SHF-205ENST00000559566 NLRP1Q9C000 1473 aa29.31■■■□□ 2.28
SHF-205ENST00000559566 SYNMO15061 1565 aa29.3■■■□□ 2.28
SHF-205ENST00000559566 CFAP65Q6ZU64 1925 aaKnown RBP29.3■■■□□ 2.28
SHF-205ENST00000559566 RPRD2Q5VT52 1461 aaKnown RBP29.29■■■□□ 2.28
SHF-205ENST00000559566 E9PCH4 1651 aa29.29■■■□□ 2.28
SHF-205ENST00000559566 SETD5Q9C0A6 1442 aa29.27■■■□□ 2.28
SHF-205ENST00000559566 TRIM52Q96A61 297 aa29.26■■■□□ 2.27
SHF-205ENST00000559566 STRCQ7RTU9 1775 aa29.25■■■□□ 2.27
SHF-205ENST00000559566 UGGT1Q9NYU2 1555 aa29.23■■■□□ 2.27
SHF-205ENST00000559566 IDI1Q13907 227 aa29.22■■■□□ 2.27
SHF-205ENST00000559566 RAB3GAP2Q9H2M9 1393 aa29.21■■■□□ 2.27
SHF-205ENST00000559566 PLA2R1Q13018 1463 aa29.2■■■□□ 2.26
SHF-205ENST00000559566 NCKAP5LQ9HCH0 1330 aa29.2■■■□□ 2.26
SHF-205ENST00000559566 PIK3C2BO00750 1634 aa29.19■■■□□ 2.26
SHF-205ENST00000559566 UBR1Q8IWV7 1749 aa29.16■■■□□ 2.26
SHF-205ENST00000559566 PKD2Q13563 968 aa29.14■■■□□ 2.26
SHF-205ENST00000559566 THEMISQ8N1K5 641 aaPredicted RBP29.14■■■□□ 2.26
SHF-205ENST00000559566 SLC4A1APQ9BWU0 796 aaKnown RBP29.14■■■□□ 2.26
SHF-205ENST00000559566 PTPRTO14522 1441 aa29.13■■■□□ 2.25
SHF-205ENST00000559566 SLC52A1Q9NWF4 448 aa29.11■■■□□ 2.25
SHF-205ENST00000559566 ADGRB3O60242 1522 aa29.1■■■□□ 2.25
SHF-205ENST00000559566 FOXD1Q16676 465 aa29.09■■■□□ 2.25
SHF-205ENST00000559566 NEURL4Q96JN8 1562 aa29.09■■■□□ 2.25
SHF-205ENST00000559566 MPHOSPH9Q99550 1183 aa29.08■■■□□ 2.25
SHF-205ENST00000559566 SPHKAPQ2M3C7 1700 aa29.07■■■□□ 2.24
SHF-205ENST00000559566 ARHGAP23Q9P227 1491 aa29.07■■■□□ 2.24
SHF-205ENST00000559566 SLIT1O75093 1534 aa29.05■■■□□ 2.24
SHF-205ENST00000559566 STAG3Q9UJ98 1225 aa29.04■■■□□ 2.24
SHF-205ENST00000559566 TRPM2O94759 1503 aa29.04■■■□□ 2.24
SHF-205ENST00000559566 TMEM2Q9UHN6 1383 aa29.03■■■□□ 2.24
SHF-205ENST00000559566 LTKP29376 864 aa29.03■■■□□ 2.24
SHF-205ENST00000559566 ANKLE2Q86XL3 938 aa29.03■■■□□ 2.24
SHF-205ENST00000559566 KDM5AP29375 1690 aaKnown RBP29.02■■■□□ 2.24
SHF-205ENST00000559566 TMEM131LA2VDJ0 1609 aa29.02■■■□□ 2.24
SHF-205ENST00000559566 DMRT2Q9Y5R5 561 aa29.01■■■□□ 2.23
SHF-205ENST00000559566 CLTCL1P53675 1640 aa29.01■■■□□ 2.23
SHF-205ENST00000559566 POLR1AO95602 1720 aaPredicted RBP29■■■□□ 2.23
SHF-205ENST00000559566 SCAF11Q99590 1463 aaKnown RBP28.98■■■□□ 2.23
SHF-205ENST00000559566 CHGAP10645 457 aaKnown RBP28.98■■■□□ 2.23
SHF-205ENST00000559566 HRCP23327 699 aa28.98■■■□□ 2.23
SHF-205ENST00000559566 MED14O60244 1454 aa28.97■■■□□ 2.23
SHF-205ENST00000559566 TXNDC2Q86VQ3 553 aa28.97■■■□□ 2.23
SHF-205ENST00000559566 NPHP4O75161 1426 aaPredicted RBP28.96■■■□□ 2.23
SHF-205ENST00000559566 MYO5BQ9ULV0 1848 aa28.96■■■□□ 2.23
SHF-205ENST00000559566 ACIN1Q9UKV3 1341 aaKnown RBP28.94■■■□□ 2.22
SHF-205ENST00000559566 ZFYVE9O95405 1425 aa28.94■■■□□ 2.22
SHF-205ENST00000559566 TRIM26Q12899 539 aaPredicted RBP28.94■■■□□ 2.22
SHF-205ENST00000559566 RIMS2Q9UQ26 1411 aa28.91■■■□□ 2.22
SHF-205ENST00000559566 EID1Q9Y6B2 187 aa28.89■■■□□ 2.22
SHF-205ENST00000559566 IQGAP1P46940 1657 aa28.88■■■□□ 2.21
SHF-205ENST00000559566 ZNF335Q9H4Z2 1342 aaPredicted RBP28.88■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms