RNA–Protein interactions for RNA: ENST00000559494.1

TSPAN3-207, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,326 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-207ENST00000559494 EIF2AK4Q9P2K8 1649 aaKnown RBP30.77■■■□□ 2.52
TSPAN3-207ENST00000559494 CEBPAP49715 358 aaPredicted RBP30.77■■■□□ 2.52
TSPAN3-207ENST00000559494 PLPPR3Q6T4P5 718 aa30.77■■■□□ 2.52
TSPAN3-207ENST00000559494 CNTLNQ9NXG0 1405 aa30.75■■■□□ 2.51
TSPAN3-207ENST00000559494 ANKRD50Q9ULJ7 1429 aa30.74■■■□□ 2.51
TSPAN3-207ENST00000559494 RNF17Q9BXT8 1623 aaKnown RBP30.73■■■□□ 2.51
TSPAN3-207ENST00000559494 WASHC2CQ9Y4E1 1318 aa30.7■■■□□ 2.51
TSPAN3-207ENST00000559494 ZMYM3Q14202 1370 aa30.7■■■□□ 2.51
TSPAN3-207ENST00000559494 CLTCQ00610 1675 aaKnown RBP30.69■■■□□ 2.5
TSPAN3-207ENST00000559494 GRWD1Q9BQ67 446 aaKnown RBP eCLIP30.69■■■□□ 2.5
TSPAN3-207ENST00000559494 MROH1Q8NDA8 1641 aa30.68■■■□□ 2.5
TSPAN3-207ENST00000559494 C3P01024 1663 aa30.65■■■□□ 2.5
TSPAN3-207ENST00000559494 MROH2AA6NES4 1674 aa30.64■■■□□ 2.5
TSPAN3-207ENST00000559494 KDM5DQ9BY66 1539 aa30.63■■■□□ 2.49
TSPAN3-207ENST00000559494 FAM135AQ9P2D6 1515 aa30.62■■■□□ 2.49
TSPAN3-207ENST00000559494 NAIPQ13075 1403 aa30.62■■■□□ 2.49
TSPAN3-207ENST00000559494 DEPDC5O75140 1603 aa30.62■■■□□ 2.49
TSPAN3-207ENST00000559494 ABCC3O15438 1527 aa30.6■■■□□ 2.49
TSPAN3-207ENST00000559494 PRDM15P57071 1507 aaPredicted RBP30.6■■■□□ 2.49
TSPAN3-207ENST00000559494 SETD1BQ9UPS6 1966 aaKnown RBP30.57■■■□□ 2.48
TSPAN3-207ENST00000559494 KANK1Q14678 1352 aa30.57■■■□□ 2.48
TSPAN3-207ENST00000559494 HFM1A2PYH4 1435 aa30.56■■■□□ 2.48
TSPAN3-207ENST00000559494 FBXO31Q5XUX0 539 aaPredicted RBP30.54■■■□□ 2.48
TSPAN3-207ENST00000559494 CEP152O94986 1710 aa30.54■■■□□ 2.48
TSPAN3-207ENST00000559494 VWDEQ8N2E2 1590 aa30.54■■■□□ 2.48
TSPAN3-207ENST00000559494 ZC3H13Q5T200 1668 aaKnown RBP30.52■■■□□ 2.48
TSPAN3-207ENST00000559494 NPATQ14207 1427 aa30.5■■■□□ 2.47
TSPAN3-207ENST00000559494 GCC2Q8IWJ2 1684 aa30.5■■■□□ 2.47
TSPAN3-207ENST00000559494 PZPP20742 1482 aa30.49■■■□□ 2.47
TSPAN3-207ENST00000559494 UNC13BO14795 1591 aa30.49■■■□□ 2.47
TSPAN3-207ENST00000559494 LMTK2Q8IWU2 1503 aa30.48■■■□□ 2.47
TSPAN3-207ENST00000559494 NUP155O75694 1391 aa30.46■■■□□ 2.47
TSPAN3-207ENST00000559494 CFAP65Q6ZU64 1925 aaKnown RBP30.46■■■□□ 2.47
TSPAN3-207ENST00000559494 CAMSAP1Q5T5Y3 1602 aa30.46■■■□□ 2.47
TSPAN3-207ENST00000559494 ARHGAP31Q2M1Z3 1444 aa30.44■■■□□ 2.46
TSPAN3-207ENST00000559494 LMTK3Q96Q04 1460 aa30.42■■■□□ 2.46
TSPAN3-207ENST00000559494 TNRQ92752 1358 aa30.39■■■□□ 2.46
TSPAN3-207ENST00000559494 PREX1Q8TCU6 1659 aa30.39■■■□□ 2.46
TSPAN3-207ENST00000559494 UHRF1BP1Q6BDS2 1440 aa30.38■■■□□ 2.45
TSPAN3-207ENST00000559494 SETD5Q9C0A6 1442 aa30.38■■■□□ 2.45
TSPAN3-207ENST00000559494 TRIM52Q96A61 297 aa30.37■■■□□ 2.45
TSPAN3-207ENST00000559494 IQGAP3Q86VI3 1631 aa30.37■■■□□ 2.45
TSPAN3-207ENST00000559494 ERVK-7P63135 1459 aa30.36■■■□□ 2.45
TSPAN3-207ENST00000559494 HSPA2P54652 639 aa30.36■■■□□ 2.45
TSPAN3-207ENST00000559494 EFCAB6Q5THR3 1501 aa30.35■■■□□ 2.45
TSPAN3-207ENST00000559494 SPATA31D1Q6ZQQ2 1576 aa30.34■■■□□ 2.45
TSPAN3-207ENST00000559494 TET3O43151 1660 aa30.34■■■□□ 2.45
TSPAN3-207ENST00000559494 MYO3AQ8NEV4 1616 aa30.28■■■□□ 2.44
TSPAN3-207ENST00000559494 RPRD2Q5VT52 1461 aaKnown RBP30.28■■■□□ 2.44
TSPAN3-207ENST00000559494 RAB3GAP2Q9H2M9 1393 aa30.28■■■□□ 2.44
TSPAN3-207ENST00000559494 NOS1P29475 1434 aa30.26■■■□□ 2.44
TSPAN3-207ENST00000559494 E9PCH4 1651 aa30.25■■■□□ 2.43
TSPAN3-207ENST00000559494 A2ML1A8K2U0 1454 aa30.24■■■□□ 2.43
TSPAN3-207ENST00000559494 NLRP1Q9C000 1473 aa30.24■■■□□ 2.43
TSPAN3-207ENST00000559494 TRIM26Q12899 539 aaPredicted RBP30.23■■■□□ 2.43
TSPAN3-207ENST00000559494 CEP170BQ9Y4F5 1589 aaPredicted RBP30.23■■■□□ 2.43
TSPAN3-207ENST00000559494 SLC4A1APQ9BWU0 796 aaKnown RBP30.22■■■□□ 2.43
TSPAN3-207ENST00000559494 ZNF142P52746 1687 aaPredicted RBP30.21■■■□□ 2.43
TSPAN3-207ENST00000559494 PKD2Q13563 968 aa30.21■■■□□ 2.43
TSPAN3-207ENST00000559494 IDI1Q13907 227 aa30.21■■■□□ 2.43
TSPAN3-207ENST00000559494 ACIN1Q9UKV3 1341 aaKnown RBP30.2■■■□□ 2.43
TSPAN3-207ENST00000559494 HRCP23327 699 aa30.2■■■□□ 2.42
TSPAN3-207ENST00000559494 SYNMO15061 1565 aa30.19■■■□□ 2.42
TSPAN3-207ENST00000559494 MPHOSPH9Q99550 1183 aa30.18■■■□□ 2.42
TSPAN3-207ENST00000559494 SLC52A1Q9NWF4 448 aa30.17■■■□□ 2.42
TSPAN3-207ENST00000559494 THEMISQ8N1K5 641 aaPredicted RBP30.14■■■□□ 2.42
TSPAN3-207ENST00000559494 UGGT1Q9NYU2 1555 aa30.13■■■□□ 2.41
TSPAN3-207ENST00000559494 PTPRTO14522 1441 aa30.12■■■□□ 2.41
TSPAN3-207ENST00000559494 FOXD1Q16676 465 aa30.11■■■□□ 2.41
TSPAN3-207ENST00000559494 PIK3C2BO00750 1634 aa30.09■■■□□ 2.41
TSPAN3-207ENST00000559494 STRCQ7RTU9 1775 aa30.08■■■□□ 2.41
TSPAN3-207ENST00000559494 STAG3Q9UJ98 1225 aa30.07■■■□□ 2.4
TSPAN3-207ENST00000559494 NCKAP5LQ9HCH0 1330 aa30.07■■■□□ 2.4
TSPAN3-207ENST00000559494 UBR1Q8IWV7 1749 aa30.06■■■□□ 2.4
TSPAN3-207ENST00000559494 PLA2R1Q13018 1463 aa30.06■■■□□ 2.4
TSPAN3-207ENST00000559494 SPHKAPQ2M3C7 1700 aa30.05■■■□□ 2.4
TSPAN3-207ENST00000559494 ANKLE2Q86XL3 938 aa30■■■□□ 2.39
TSPAN3-207ENST00000559494 CHGAP10645 457 aaKnown RBP29.99■■■□□ 2.39
TSPAN3-207ENST00000559494 TRPM2O94759 1503 aa29.98■■■□□ 2.39
TSPAN3-207ENST00000559494 DMRT2Q9Y5R5 561 aa29.97■■■□□ 2.39
TSPAN3-207ENST00000559494 KDM5AP29375 1690 aaKnown RBP29.97■■■□□ 2.39
TSPAN3-207ENST00000559494 ADGRB3O60242 1522 aa29.97■■■□□ 2.39
TSPAN3-207ENST00000559494 LTKP29376 864 aa29.96■■■□□ 2.39
TSPAN3-207ENST00000559494 TMEM2Q9UHN6 1383 aa29.95■■■□□ 2.39
TSPAN3-207ENST00000559494 ARHGAP23Q9P227 1491 aa29.95■■■□□ 2.39
TSPAN3-207ENST00000559494 TMEM131LA2VDJ0 1609 aa29.95■■■□□ 2.39
TSPAN3-207ENST00000559494 SLIT1O75093 1534 aa29.94■■■□□ 2.38
TSPAN3-207ENST00000559494 CLTCL1P53675 1640 aa29.94■■■□□ 2.38
TSPAN3-207ENST00000559494 TXNDC2Q86VQ3 553 aa29.94■■■□□ 2.38
TSPAN3-207ENST00000559494 MYO5BQ9ULV0 1848 aa29.94■■■□□ 2.38
TSPAN3-207ENST00000559494 EID1Q9Y6B2 187 aa29.9■■■□□ 2.38
TSPAN3-207ENST00000559494 NEURL4Q96JN8 1562 aa29.88■■■□□ 2.37
TSPAN3-207ENST00000559494 POLR1AO95602 1720 aaPredicted RBP29.87■■■□□ 2.37
TSPAN3-207ENST00000559494 SCAF11Q99590 1463 aaKnown RBP29.86■■■□□ 2.37
TSPAN3-207ENST00000559494 MED14O60244 1454 aa29.85■■■□□ 2.37
TSPAN3-207ENST00000559494 ANKRD30BQ9BXX2 1392 aa29.85■■■□□ 2.37
TSPAN3-207ENST00000559494 NPHP4O75161 1426 aaPredicted RBP29.84■■■□□ 2.37
TSPAN3-207ENST00000559494 ZFYVE9O95405 1425 aa29.84■■■□□ 2.37
TSPAN3-207ENST00000559494 RIMS2Q9UQ26 1411 aa29.84■■■□□ 2.37
TSPAN3-207ENST00000559494 PCGF6Q9BYE7 350 aa29.84■■■□□ 2.37
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms