RNA–Protein interactions for RNA: ENST00000559061.5

SNX1-204, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-204ENST00000559061 RRP7BPQ9NSQ0 103 aa17.57■□□□□ 0.4
SNX1-204ENST00000559061 C3P01024 1663 aa17.57■□□□□ 0.4
SNX1-204ENST00000559061 ROCK1Q13464 1354 aa17.56■□□□□ 0.4
SNX1-204ENST00000559061 MROH2AA6NES4 1674 aa17.56■□□□□ 0.4
SNX1-204ENST00000559061 PRDM15P57071 1507 aaPredicted RBP17.56■□□□□ 0.4
SNX1-204ENST00000559061 GCC2Q8IWJ2 1684 aa17.54■□□□□ 0.4
SNX1-204ENST00000559061 CEP152O94986 1710 aa17.53■□□□□ 0.4
SNX1-204ENST00000559061 KIF3BO15066 747 aa17.53■□□□□ 0.4
SNX1-204ENST00000559061 VWDEQ8N2E2 1590 aa17.53■□□□□ 0.4
SNX1-204ENST00000559061 ITGAEP38570 1179 aa17.52■□□□□ 0.4
SNX1-204ENST00000559061 ABCC3O15438 1527 aa17.52■□□□□ 0.39
SNX1-204ENST00000559061 KDM5DQ9BY66 1539 aa17.52■□□□□ 0.39
SNX1-204ENST00000559061 FAM135AQ9P2D6 1515 aa17.51■□□□□ 0.39
SNX1-204ENST00000559061 UNC13BO14795 1591 aa17.5■□□□□ 0.39
SNX1-204ENST00000559061 ANKRD50Q9ULJ7 1429 aa17.5■□□□□ 0.39
SNX1-204ENST00000559061 ZC3H13Q5T200 1668 aaKnown RBP17.5■□□□□ 0.39
SNX1-204ENST00000559061 GGT6Q6P531 493 aa17.49■□□□□ 0.39
SNX1-204ENST00000559061 NAIPQ13075 1403 aa17.48■□□□□ 0.39
SNX1-204ENST00000559061 CNTLNQ9NXG0 1405 aa17.48■□□□□ 0.39
SNX1-204ENST00000559061 CAMSAP1Q5T5Y3 1602 aa17.47■□□□□ 0.39
SNX1-204ENST00000559061 CEBPAP49715 358 aaPredicted RBP17.47■□□□□ 0.39
SNX1-204ENST00000559061 HFM1A2PYH4 1435 aa17.45■□□□□ 0.38
SNX1-204ENST00000559061 ZMYM3Q14202 1370 aa17.44■□□□□ 0.38
SNX1-204ENST00000559061 LMTK2Q8IWU2 1503 aa17.44■□□□□ 0.38
SNX1-204ENST00000559061 PPP6R1Q9UPN7 881 aa17.42■□□□□ 0.38
SNX1-204ENST00000559061 IQGAP3Q86VI3 1631 aa17.42■□□□□ 0.38
SNX1-204ENST00000559061 PZPP20742 1482 aa17.42■□□□□ 0.38
SNX1-204ENST00000559061 LMTK3Q96Q04 1460 aa17.41■□□□□ 0.38
SNX1-204ENST00000559061 PREX1Q8TCU6 1659 aa17.4■□□□□ 0.38
SNX1-204ENST00000559061 EFCAB6Q5THR3 1501 aa17.39■□□□□ 0.37
SNX1-204ENST00000559061 MYO3AQ8NEV4 1616 aa17.39■□□□□ 0.37
SNX1-204ENST00000559061 SPATA31D1Q6ZQQ2 1576 aa17.38■□□□□ 0.37
SNX1-204ENST00000559061 PLPPR3Q6T4P5 718 aa17.38■□□□□ 0.37
SNX1-204ENST00000559061 TET3O43151 1660 aa17.38■□□□□ 0.37
SNX1-204ENST00000559061 NPATQ14207 1427 aa17.38■□□□□ 0.37
SNX1-204ENST00000559061 WASHC2CQ9Y4E1 1318 aa17.37■□□□□ 0.37
SNX1-204ENST00000559061 E9PCH4 1651 aa17.36■□□□□ 0.37
SNX1-204ENST00000559061 ARHGAP31Q2M1Z3 1444 aa17.36■□□□□ 0.37
SNX1-204ENST00000559061 ZNF142P52746 1687 aaPredicted RBP17.36■□□□□ 0.37
SNX1-204ENST00000559061 FBXO31Q5XUX0 539 aaPredicted RBP17.35■□□□□ 0.37
SNX1-204ENST00000559061 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.35■□□□□ 0.374e-7■□□□□ 10.4
SNX1-204ENST00000559061 ERVK-7P63135 1459 aa17.35■□□□□ 0.37
SNX1-204ENST00000559061 CFAP65Q6ZU64 1925 aaKnown RBP17.35■□□□□ 0.37
SNX1-204ENST00000559061 SETD1BQ9UPS6 1966 aaKnown RBP17.35■□□□□ 0.37
SNX1-204ENST00000559061 SYNMO15061 1565 aa17.33■□□□□ 0.37
SNX1-204ENST00000559061 ESF1Q9H501 851 aaKnown RBP17.32■□□□□ 0.36
SNX1-204ENST00000559061 CEP170BQ9Y4F5 1589 aaPredicted RBP17.3■□□□□ 0.36
SNX1-204ENST00000559061 KANK1Q14678 1352 aa17.29■□□□□ 0.36
SNX1-204ENST00000559061 NOS1P29475 1434 aa17.29■□□□□ 0.36
SNX1-204ENST00000559061 NUP155O75694 1391 aa17.28■□□□□ 0.36
SNX1-204ENST00000559061 TNRQ92752 1358 aa17.28■□□□□ 0.36
SNX1-204ENST00000559061 RPRD2Q5VT52 1461 aaKnown RBP17.27■□□□□ 0.36
SNX1-204ENST00000559061 UHRF1BP1Q6BDS2 1440 aa17.27■□□□□ 0.35
SNX1-204ENST00000559061 SETD5Q9C0A6 1442 aa17.27■□□□□ 0.35
SNX1-204ENST00000559061 RAB3GAP2Q9H2M9 1393 aa17.26■□□□□ 0.35
SNX1-204ENST00000559061 STRCQ7RTU9 1775 aa17.25■□□□□ 0.35
SNX1-204ENST00000559061 PIK3C2BO00750 1634 aa17.25■□□□□ 0.35
SNX1-204ENST00000559061 A2ML1A8K2U0 1454 aa17.24■□□□□ 0.35
SNX1-204ENST00000559061 UGGT1Q9NYU2 1555 aa17.24■□□□□ 0.35
SNX1-204ENST00000559061 HSPA2P54652 639 aa17.24■□□□□ 0.35
SNX1-204ENST00000559061 UBR1Q8IWV7 1749 aa17.24■□□□□ 0.35
SNX1-204ENST00000559061 SPHKAPQ2M3C7 1700 aa17.23■□□□□ 0.35
SNX1-204ENST00000559061 NLRP1Q9C000 1473 aa17.23■□□□□ 0.35
SNX1-204ENST00000559061 PLA2R1Q13018 1463 aa17.21■□□□□ 0.35
SNX1-204ENST00000559061 PTPRTO14522 1441 aa17.2■□□□□ 0.34
SNX1-204ENST00000559061 MYO5BQ9ULV0 1848 aa17.19■□□□□ 0.34
SNX1-204ENST00000559061 KDM5AP29375 1690 aaKnown RBP17.18■□□□□ 0.34
SNX1-204ENST00000559061 CLTCL1P53675 1640 aa17.18■□□□□ 0.34
SNX1-204ENST00000559061 ADGRB3O60242 1522 aa17.16■□□□□ 0.34
SNX1-204ENST00000559061 TRPM2O94759 1503 aa17.16■□□□□ 0.34
SNX1-204ENST00000559061 NEURL4Q96JN8 1562 aa17.16■□□□□ 0.34
SNX1-204ENST00000559061 TMEM131LA2VDJ0 1609 aa17.16■□□□□ 0.34
SNX1-204ENST00000559061 POLR1AO95602 1720 aaPredicted RBP17.14■□□□□ 0.33
SNX1-204ENST00000559061 IDI1Q13907 227 aa17.14■□□□□ 0.33
SNX1-204ENST00000559061 TRIM52Q96A61 297 aa17.14■□□□□ 0.33
SNX1-204ENST00000559061 ARHGAP23Q9P227 1491 aa17.13■□□□□ 0.33
SNX1-204ENST00000559061 PKD2Q13563 968 aa17.12■□□□□ 0.33
SNX1-204ENST00000559061 FOXD1Q16676 465 aa17.12■□□□□ 0.33
SNX1-204ENST00000559061 SLIT1O75093 1534 aa17.11■□□□□ 0.33
SNX1-204ENST00000559061 TRIM26Q12899 539 aaPredicted RBP17.11■□□□□ 0.33
SNX1-204ENST00000559061 MPHOSPH9Q99550 1183 aa17.11■□□□□ 0.33
SNX1-204ENST00000559061 SLC4A1APQ9BWU0 796 aaKnown RBP17.1■□□□□ 0.33
SNX1-204ENST00000559061 HRCP23327 699 aa17.09■□□□□ 0.33
SNX1-204ENST00000559061 ZFYVE9O95405 1425 aa17.06■□□□□ 0.32
SNX1-204ENST00000559061 NCKAP5LQ9HCH0 1330 aa17.06■□□□□ 0.32
SNX1-204ENST00000559061 SLC52A1Q9NWF4 448 aa17.06■□□□□ 0.32
SNX1-204ENST00000559061 MED14O60244 1454 aa17.05■□□□□ 0.32
SNX1-204ENST00000559061 TMEM2Q9UHN6 1383 aa17.04■□□□□ 0.32
SNX1-204ENST00000559061 KIF1BO60333 1816 aa17.04■□□□□ 0.32
SNX1-204ENST00000559061 LTKP29376 864 aa17.03■□□□□ 0.32
SNX1-204ENST00000559061 IQGAP1P46940 1657 aa17.03■□□□□ 0.32
SNX1-204ENST00000559061 SCAF11Q99590 1463 aaKnown RBP17.02■□□□□ 0.32
SNX1-204ENST00000559061 THEMISQ8N1K5 641 aaPredicted RBP17.02■□□□□ 0.32
SNX1-204ENST00000559061 NEXMIFQ5QGS0 1516 aa17.01■□□□□ 0.31
SNX1-204ENST00000559061 ANKRD30BQ9BXX2 1392 aa17.01■□□□□ 0.31
SNX1-204ENST00000559061 SPATA31E1Q6ZUB1 1445 aa17■□□□□ 0.31
SNX1-204ENST00000559061 ACIN1Q9UKV3 1341 aaKnown RBP16.99■□□□□ 0.31
SNX1-204ENST00000559061 IFT172Q9UG01 1749 aa16.99■□□□□ 0.31
SNX1-204ENST00000559061 NRXN3Q9Y4C0 1643 aa16.99■□□□□ 0.31
SNX1-204ENST00000559061 NPHP4O75161 1426 aaPredicted RBP16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms