RNA–Protein interactions for RNA: ENST00000559043.1

CDC42BPB-204, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 5

Gene CDC42BPB, Length 1,999 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-204ENST00000559043 ARID4BQ4LE39 1312 aaPredicted RBP23.38■■□□□ 1.33
CDC42BPB-204ENST00000559043 EIF2AK4Q9P2K8 1649 aaKnown RBP23.38■■□□□ 1.33
CDC42BPB-204ENST00000559043 MLECQ14165 292 aa23.37■■□□□ 1.33
CDC42BPB-204ENST00000559043 BCORL1Q5H9F3 1711 aa23.37■■□□□ 1.33
CDC42BPB-204ENST00000559043 MROH1Q8NDA8 1641 aa23.36■■□□□ 1.33
CDC42BPB-204ENST00000559043 TRIM52Q96A61 297 aa23.36■■□□□ 1.33
CDC42BPB-204ENST00000559043 NUP155O75694 1391 aa23.33■■□□□ 1.33
CDC42BPB-204ENST00000559043 DEPDC5O75140 1603 aa23.33■■□□□ 1.33
CDC42BPB-204ENST00000559043 RNF17Q9BXT8 1623 aaKnown RBP23.33■■□□□ 1.32
CDC42BPB-204ENST00000559043 UNC13BO14795 1591 aa23.32■■□□□ 1.32
CDC42BPB-204ENST00000559043 PRDM15P57071 1507 aaPredicted RBP23.28■■□□□ 1.32
CDC42BPB-204ENST00000559043 PZPP20742 1482 aa23.28■■□□□ 1.32
CDC42BPB-204ENST00000559043 VWDEQ8N2E2 1590 aa23.28■■□□□ 1.32
CDC42BPB-204ENST00000559043 MPHOSPH9Q99550 1183 aa23.26■■□□□ 1.31
CDC42BPB-204ENST00000559043 KDM5DQ9BY66 1539 aa23.25■■□□□ 1.31
CDC42BPB-204ENST00000559043 WASHC2CQ9Y4E1 1318 aa23.25■■□□□ 1.31
CDC42BPB-204ENST00000559043 FAM135AQ9P2D6 1515 aa23.24■■□□□ 1.31
CDC42BPB-204ENST00000559043 SLC4A1APQ9BWU0 796 aaKnown RBP23.23■■□□□ 1.31
CDC42BPB-204ENST00000559043 IQGAP3Q86VI3 1631 aa23.23■■□□□ 1.31
CDC42BPB-204ENST00000559043 KANK1Q14678 1352 aa23.22■■□□□ 1.31
CDC42BPB-204ENST00000559043 FOXD1Q16676 465 aa23.21■■□□□ 1.31
CDC42BPB-204ENST00000559043 PPP6R1Q9UPN7 881 aa23.21■■□□□ 1.31
CDC42BPB-204ENST00000559043 DHX57Q6P158 1386 aaKnown RBP23.21■■□□□ 1.31
CDC42BPB-204ENST00000559043 ABCC3O15438 1527 aa23.21■■□□□ 1.31
CDC42BPB-204ENST00000559043 CEP152O94986 1710 aa23.2■■□□□ 1.31
CDC42BPB-204ENST00000559043 ACIN1Q9UKV3 1341 aaKnown RBP23.2■■□□□ 1.3
CDC42BPB-204ENST00000559043 PKD2Q13563 968 aa23.19■■□□□ 1.3
CDC42BPB-204ENST00000559043 LMTK2Q8IWU2 1503 aa23.17■■□□□ 1.3
CDC42BPB-204ENST00000559043 CLTCQ00610 1675 aaKnown RBP23.16■■□□□ 1.3
CDC42BPB-204ENST00000559043 ADAMTSL3P82987 1691 aa23.15■■□□□ 1.3
CDC42BPB-204ENST00000559043 ZMYM3Q14202 1370 aa23.13■■□□□ 1.29
CDC42BPB-204ENST00000559043 TET3O43151 1660 aa23.13■■□□□ 1.29
CDC42BPB-204ENST00000559043 MADDQ8WXG6 1647 aa23.13■■□□□ 1.29
CDC42BPB-204ENST00000559043 KDM4FA0A1W2PPD8 638 aa23.12■■□□□ 1.29
CDC42BPB-204ENST00000559043 ESF1Q9H501 851 aaKnown RBP23.12■■□□□ 1.29
CDC42BPB-204ENST00000559043 NPATQ14207 1427 aa23.12■■□□□ 1.29
CDC42BPB-204ENST00000559043 E9PCH4 1651 aa23.12■■□□□ 1.29
CDC42BPB-204ENST00000559043 CLSPNQ9HAW4 1339 aa23.12■■□□□ 1.29
CDC42BPB-204ENST00000559043 CAMSAP1Q5T5Y3 1602 aa23.11■■□□□ 1.29
CDC42BPB-204ENST00000559043 CEBPAP49715 358 aaPredicted RBP23.11■■□□□ 1.29
CDC42BPB-204ENST00000559043 FBXO31Q5XUX0 539 aaPredicted RBP23.11■■□□□ 1.29
CDC42BPB-204ENST00000559043 ZC3H13Q5T200 1668 aaKnown RBP23.11■■□□□ 1.29
CDC42BPB-204ENST00000559043 FER1L4A9Z1Z3 1794 aa23.11■■□□□ 1.29
CDC42BPB-204ENST00000559043 EFCAB6Q5THR3 1501 aa23.11■■□□□ 1.29
CDC42BPB-204ENST00000559043 CFAP65Q6ZU64 1925 aaKnown RBP23.09■■□□□ 1.29
CDC42BPB-204ENST00000559043 ARHGAP31Q2M1Z3 1444 aa23.08■■□□□ 1.29
CDC42BPB-204ENST00000559043 CNTLNQ9NXG0 1405 aa23.08■■□□□ 1.28
CDC42BPB-204ENST00000559043 PLA2R1Q13018 1463 aa23.07■■□□□ 1.28
CDC42BPB-204ENST00000559043 RIMS1Q86UR5 1692 aaKnown RBP23.06■■□□□ 1.28
CDC42BPB-204ENST00000559043 PLPPR3Q6T4P5 718 aa23.05■■□□□ 1.28
CDC42BPB-204ENST00000559043 ANKRD30BQ9BXX2 1392 aa23.05■■□□□ 1.28
CDC42BPB-204ENST00000559043 MROH2AA6NES4 1674 aa23.03■■□□□ 1.28
CDC42BPB-204ENST00000559043 C3P01024 1663 aa23.02■■□□□ 1.28
CDC42BPB-204ENST00000559043 RPRD2Q5VT52 1461 aaKnown RBP23.02■■□□□ 1.28
CDC42BPB-204ENST00000559043 PTPRTO14522 1441 aa23.01■■□□□ 1.27
CDC42BPB-204ENST00000559043 SIN3AQ96ST3 1273 aa23■■□□□ 1.27
CDC42BPB-204ENST00000559043 NOS1P29475 1434 aa23■■□□□ 1.27
CDC42BPB-204ENST00000559043 PTPRMP28827 1452 aa22.99■■□□□ 1.27
CDC42BPB-204ENST00000559043 ZNF316A6NFI3 1004 aaPredicted RBP22.99■■□□□ 1.27
CDC42BPB-204ENST00000559043 ERVK-7P63135 1459 aa22.98■■□□□ 1.27
CDC42BPB-204ENST00000559043 DIEXFQ68CQ4 756 aaKnown RBP22.98■■□□□ 1.27
CDC42BPB-204ENST00000559043 PREX1Q8TCU6 1659 aa22.97■■□□□ 1.27
CDC42BPB-204ENST00000559043 SYNMO15061 1565 aa22.96■■□□□ 1.27
CDC42BPB-204ENST00000559043 UGGT1Q9NYU2 1555 aa22.96■■□□□ 1.27
CDC42BPB-204ENST00000559043 SPHKAPQ2M3C7 1700 aa22.96■■□□□ 1.27
CDC42BPB-204ENST00000559043 SPATA31D1Q6ZQQ2 1576 aa22.95■■□□□ 1.26
CDC42BPB-204ENST00000559043 IDI1Q13907 227 aa22.92■■□□□ 1.26
CDC42BPB-204ENST00000559043 TRPM2O94759 1503 aa22.92■■□□□ 1.26
CDC42BPB-204ENST00000559043 NEUROD1Q13562 356 aa22.91■■□□□ 1.26
CDC42BPB-204ENST00000559043 TNRQ92752 1358 aa22.9■■□□□ 1.26
CDC42BPB-204ENST00000559043 CLTCL1P53675 1640 aa22.89■■□□□ 1.26
CDC42BPB-204ENST00000559043 CCDC144AA2RUR9 1427 aa22.88■■□□□ 1.25
CDC42BPB-204ENST00000559043 SLC52A1Q9NWF4 448 aa22.87■■□□□ 1.25
CDC42BPB-204ENST00000559043 PIK3C2BO00750 1634 aa22.86■■□□□ 1.25
CDC42BPB-204ENST00000559043 SETD1BQ9UPS6 1966 aaKnown RBP22.81■■□□□ 1.24
CDC42BPB-204ENST00000559043 SPATA31E1Q6ZUB1 1445 aa22.8■■□□□ 1.24
CDC42BPB-204ENST00000559043 CHGAP10645 457 aaKnown RBP22.8■■□□□ 1.24
CDC42BPB-204ENST00000559043 RGL3Q3MIN7 710 aa22.8■■□□□ 1.24
CDC42BPB-204ENST00000559043 NLRP1Q9C000 1473 aa22.77■■□□□ 1.24
CDC42BPB-204ENST00000559043 TMEM131LA2VDJ0 1609 aa22.77■■□□□ 1.24
CDC42BPB-204ENST00000559043 MYO3AQ8NEV4 1616 aa22.76■■□□□ 1.23
CDC42BPB-204ENST00000559043 L3MBTL2Q969R5 705 aa22.75■■□□□ 1.23
CDC42BPB-204ENST00000559043 MYO5BQ9ULV0 1848 aa22.75■■□□□ 1.23
CDC42BPB-204ENST00000559043 A2ML1A8K2U0 1454 aa22.75■■□□□ 1.23
CDC42BPB-204ENST00000559043 KIF1BO60333 1816 aa22.74■■□□□ 1.23
CDC42BPB-204ENST00000559043 ADGRB3O60242 1522 aa22.74■■□□□ 1.23
CDC42BPB-204ENST00000559043 STAG3Q9UJ98 1225 aa22.72■■□□□ 1.23
CDC42BPB-204ENST00000559043 UBR1Q8IWV7 1749 aa22.72■■□□□ 1.23
CDC42BPB-204ENST00000559043 CEP170BQ9Y4F5 1589 aaPredicted RBP22.71■■□□□ 1.23
CDC42BPB-204ENST00000559043 ZNF326Q5BKZ1 582 aaKnown RBP22.7■■□□□ 1.22
CDC42BPB-204ENST00000559043 UHRF1BP1Q6BDS2 1440 aa22.69■■□□□ 1.22
CDC42BPB-204ENST00000559043 NUTM2DQ5VT03 806 aaPredicted RBP22.69■■□□□ 1.22
CDC42BPB-204ENST00000559043 NEURL4Q96JN8 1562 aa22.68■■□□□ 1.22
CDC42BPB-204ENST00000559043 DCAF11Q8TEB1 546 aa22.68■■□□□ 1.22
CDC42BPB-204ENST00000559043 TONSLQ96HA7 1378 aa22.68■■□□□ 1.22
CDC42BPB-204ENST00000559043 KDM2AQ9Y2K7 1162 aa22.67■■□□□ 1.22
CDC42BPB-204ENST00000559043 ZNF142P52746 1687 aaPredicted RBP22.66■■□□□ 1.22
CDC42BPB-204ENST00000559043 KDM5AP29375 1690 aaKnown RBP22.65■■□□□ 1.22
CDC42BPB-204ENST00000559043 THEMISQ8N1K5 641 aaPredicted RBP22.65■■□□□ 1.22
CDC42BPB-204ENST00000559043 TMEM2Q9UHN6 1383 aa22.64■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms