RNA–Protein interactions for RNA: ENST00000558970.2

GABPB1-208, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 5

Gene GABPB1, Length 730 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-208ENST00000558970 NAIPQ13075 1403 aa18.7■□□□□ 0.58
GABPB1-208ENST00000558970 GGT6Q6P531 493 aa18.7■□□□□ 0.58
GABPB1-208ENST00000558970 RNF17Q9BXT8 1623 aaKnown RBP18.7■□□□□ 0.58
GABPB1-208ENST00000558970 RIMS1Q86UR5 1692 aaKnown RBP18.69■□□□□ 0.58
GABPB1-208ENST00000558970 CLTCQ00610 1675 aaKnown RBP18.69■□□□□ 0.58
GABPB1-208ENST00000558970 HFM1A2PYH4 1435 aa18.68■□□□□ 0.58
GABPB1-208ENST00000558970 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.67■□□□□ 0.58
GABPB1-208ENST00000558970 DEPDC5O75140 1603 aa18.67■□□□□ 0.58
GABPB1-208ENST00000558970 MROH1Q8NDA8 1641 aa18.67■□□□□ 0.58
GABPB1-208ENST00000558970 ADAMTSL3P82987 1691 aa18.66■□□□□ 0.58
GABPB1-208ENST00000558970 FBXO41Q8TF61 875 aa18.66■□□□□ 0.58
GABPB1-208ENST00000558970 UNC13BO14795 1591 aa18.64■□□□□ 0.58
GABPB1-208ENST00000558970 PLPPR3Q6T4P5 718 aa18.64■□□□□ 0.57
GABPB1-208ENST00000558970 PTPRMP28827 1452 aa18.63■□□□□ 0.57
GABPB1-208ENST00000558970 PRDM15P57071 1507 aaPredicted RBP18.62■□□□□ 0.57
GABPB1-208ENST00000558970 SETD5Q9C0A6 1442 aa18.61■□□□□ 0.57
GABPB1-208ENST00000558970 PCGF6Q9BYE7 350 aa18.61■□□□□ 0.57
GABPB1-208ENST00000558970 ZC3H13Q5T200 1668 aaKnown RBP18.6■□□□□ 0.57
GABPB1-208ENST00000558970 ESF1Q9H501 851 aaKnown RBP18.6■□□□□ 0.57
GABPB1-208ENST00000558970 CFAP65Q6ZU64 1925 aaKnown RBP18.6■□□□□ 0.57
GABPB1-208ENST00000558970 KDM5DQ9BY66 1539 aa18.59■□□□□ 0.57
GABPB1-208ENST00000558970 RAB3GAP2Q9H2M9 1393 aa18.59■□□□□ 0.57
GABPB1-208ENST00000558970 CAMSAP1Q5T5Y3 1602 aa18.59■□□□□ 0.57
GABPB1-208ENST00000558970 C3P01024 1663 aa18.58■□□□□ 0.57
GABPB1-208ENST00000558970 IQGAP3Q86VI3 1631 aa18.57■□□□□ 0.56
GABPB1-208ENST00000558970 TRIM52Q96A61 297 aa18.57■□□□□ 0.56
GABPB1-208ENST00000558970 ABCC3O15438 1527 aa18.57■□□□□ 0.56
GABPB1-208ENST00000558970 MROH2AA6NES4 1674 aa18.57■□□□□ 0.56
GABPB1-208ENST00000558970 KANK1Q14678 1352 aa18.56■□□□□ 0.56
GABPB1-208ENST00000558970 WASHC2CQ9Y4E1 1318 aa18.56■□□□□ 0.56
GABPB1-208ENST00000558970 VWDEQ8N2E2 1590 aa18.54■□□□□ 0.56
GABPB1-208ENST00000558970 NUP155O75694 1391 aa18.54■□□□□ 0.56
GABPB1-208ENST00000558970 TET3O43151 1660 aa18.53■□□□□ 0.56
GABPB1-208ENST00000558970 FAM135AQ9P2D6 1515 aa18.53■□□□□ 0.56
GABPB1-208ENST00000558970 E9PCH4 1651 aa18.51■□□□□ 0.55
GABPB1-208ENST00000558970 CEBPAP49715 358 aaPredicted RBP18.51■□□□□ 0.55
GABPB1-208ENST00000558970 CNTLNQ9NXG0 1405 aa18.49■□□□□ 0.55
GABPB1-208ENST00000558970 EFCAB6Q5THR3 1501 aa18.49■□□□□ 0.55
GABPB1-208ENST00000558970 PREX1Q8TCU6 1659 aa18.47■□□□□ 0.55
GABPB1-208ENST00000558970 PZPP20742 1482 aa18.47■□□□□ 0.55
GABPB1-208ENST00000558970 LMTK3Q96Q04 1460 aa18.47■□□□□ 0.55
GABPB1-208ENST00000558970 ZMYM3Q14202 1370 aa18.46■□□□□ 0.55
GABPB1-208ENST00000558970 LMTK2Q8IWU2 1503 aa18.46■□□□□ 0.55
GABPB1-208ENST00000558970 PPP6R1Q9UPN7 881 aa18.46■□□□□ 0.55
GABPB1-208ENST00000558970 SLC4A1APQ9BWU0 796 aaKnown RBP18.43■□□□□ 0.54
GABPB1-208ENST00000558970 SPHKAPQ2M3C7 1700 aa18.43■□□□□ 0.54
GABPB1-208ENST00000558970 NPATQ14207 1427 aa18.42■□□□□ 0.54
GABPB1-208ENST00000558970 FBXO31Q5XUX0 539 aaPredicted RBP18.42■□□□□ 0.54
GABPB1-208ENST00000558970 FOXD1Q16676 465 aa18.41■□□□□ 0.54
GABPB1-208ENST00000558970 MYO3AQ8NEV4 1616 aa18.39■□□□□ 0.53
GABPB1-208ENST00000558970 PKD2Q13563 968 aa18.39■□□□□ 0.53
GABPB1-208ENST00000558970 MPHOSPH9Q99550 1183 aa18.39■□□□□ 0.53
GABPB1-208ENST00000558970 ERVK-7P63135 1459 aa18.39■□□□□ 0.53
GABPB1-208ENST00000558970 SYNMO15061 1565 aa18.38■□□□□ 0.53
GABPB1-208ENST00000558970 SPATA31D1Q6ZQQ2 1576 aa18.38■□□□□ 0.53
GABPB1-208ENST00000558970 ARHGAP31Q2M1Z3 1444 aa18.37■□□□□ 0.53
GABPB1-208ENST00000558970 UGGT1Q9NYU2 1555 aa18.36■□□□□ 0.53
GABPB1-208ENST00000558970 RPRD2Q5VT52 1461 aaKnown RBP18.35■□□□□ 0.53
GABPB1-208ENST00000558970 HSPA2P54652 639 aa18.35■□□□□ 0.53
GABPB1-208ENST00000558970 HRCP23327 699 aa18.34■□□□□ 0.53
GABPB1-208ENST00000558970 MYO5BQ9ULV0 1848 aa18.34■□□□□ 0.53
GABPB1-208ENST00000558970 TNRQ92752 1358 aa18.33■□□□□ 0.53
GABPB1-208ENST00000558970 PIK3C2BO00750 1634 aa18.33■□□□□ 0.52
GABPB1-208ENST00000558970 CLTCL1P53675 1640 aa18.31■□□□□ 0.52
GABPB1-208ENST00000558970 ACIN1Q9UKV3 1341 aaKnown RBP18.31■□□□□ 0.52
GABPB1-208ENST00000558970 CERKQ8TCT0 537 aa18.31■□□□□ 0.52
GABPB1-208ENST00000558970 SETD1BQ9UPS6 1966 aaKnown RBP18.31■□□□□ 0.52
GABPB1-208ENST00000558970 ZNF142P52746 1687 aaPredicted RBP18.3■□□□□ 0.52
GABPB1-208ENST00000558970 NOS1P29475 1434 aa18.3■□□□□ 0.52
GABPB1-208ENST00000558970 CEP170BQ9Y4F5 1589 aaPredicted RBP18.3■□□□□ 0.52
GABPB1-208ENST00000558970 TRPM2O94759 1503 aa18.29■□□□□ 0.52
GABPB1-208ENST00000558970 KIF1BO60333 1816 aa18.29■□□□□ 0.52
GABPB1-208ENST00000558970 UHRF1BP1Q6BDS2 1440 aa18.28■□□□□ 0.52
GABPB1-208ENST00000558970 DHX57Q6P158 1386 aaKnown RBP18.28■□□□□ 0.52
GABPB1-208ENST00000558970 UBR1Q8IWV7 1749 aa18.27■□□□□ 0.52
GABPB1-208ENST00000558970 PLA2R1Q13018 1463 aa18.26■□□□□ 0.51
GABPB1-208ENST00000558970 CHGAP10645 457 aaKnown RBP18.25■□□□□ 0.51
GABPB1-208ENST00000558970 DMRT2Q9Y5R5 561 aa18.25■□□□□ 0.51
GABPB1-208ENST00000558970 PTPRTO14522 1441 aa18.24■□□□□ 0.51
GABPB1-208ENST00000558970 NLRP1Q9C000 1473 aa18.24■□□□□ 0.51
GABPB1-208ENST00000558970 A2ML1A8K2U0 1454 aa18.23■□□□□ 0.51
GABPB1-208ENST00000558970 ADGRB3O60242 1522 aa18.23■□□□□ 0.51
GABPB1-208ENST00000558970 IDI1Q13907 227 aa18.22■□□□□ 0.51
GABPB1-208ENST00000558970 STAG3Q9UJ98 1225 aa18.22■□□□□ 0.51
GABPB1-208ENST00000558970 CCDC144AA2RUR9 1427 aa18.22■□□□□ 0.51
GABPB1-208ENST00000558970 TMEM131LA2VDJ0 1609 aa18.21■□□□□ 0.51
GABPB1-208ENST00000558970 ANKRD30BQ9BXX2 1392 aa18.18■□□□□ 0.5
GABPB1-208ENST00000558970 SLC52A1Q9NWF4 448 aa18.18■□□□□ 0.5
GABPB1-208ENST00000558970 KDM5AP29375 1690 aaKnown RBP18.18■□□□□ 0.5
GABPB1-208ENST00000558970 POLR1AO95602 1720 aaPredicted RBP18.17■□□□□ 0.5
GABPB1-208ENST00000558970 ZNF326Q5BKZ1 582 aaKnown RBP18.15■□□□□ 0.5
GABPB1-208ENST00000558970 CCER1Q8TC90 406 aaPredicted RBP18.15■□□□□ 0.5
GABPB1-208ENST00000558970 SENP3Q9H4L4 574 aaPredicted RBP18.15■□□□□ 0.5
GABPB1-208ENST00000558970 NEUROD1Q13562 356 aa18.14■□□□□ 0.49
GABPB1-208ENST00000558970 SIN3AQ96ST3 1273 aa18.14■□□□□ 0.49
GABPB1-208ENST00000558970 RGL3Q3MIN7 710 aa18.13■□□□□ 0.49
GABPB1-208ENST00000558970 PPLO60437 1756 aa18.12■□□□□ 0.49
GABPB1-208ENST00000558970 NUTM2DQ5VT03 806 aaPredicted RBP18.12■□□□□ 0.49
GABPB1-208ENST00000558970 IFT172Q9UG01 1749 aa18.11■□□□□ 0.49
GABPB1-208ENST00000558970 STRCQ7RTU9 1775 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms