RNA–Protein interactions for RNA: ENST00000558541.5

CPNE6-207, Transcript of copine 6, humanhuman

TSL 2

Gene CPNE6, Length 964 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6-207ENST00000558541 NPHP4O75161 1426 aaPredicted RBP21.78■■□□□ 1.08
CPNE6-207ENST00000558541 THEMISQ8N1K5 641 aaPredicted RBP21.77■■□□□ 1.08
CPNE6-207ENST00000558541 RNF17Q9BXT8 1623 aaKnown RBP21.77■■□□□ 1.07
CPNE6-207ENST00000558541 STRCP1A6NGW2 1772 aa21.76■■□□□ 1.07
CPNE6-207ENST00000558541 ADGBQ8N7X0 1667 aa21.75■■□□□ 1.07
CPNE6-207ENST00000558541 INO80Q9ULG1 1556 aaPredicted RBP21.74■■□□□ 1.07
CPNE6-207ENST00000558541 LRRC7Q96NW7 1537 aa21.74■■□□□ 1.07
CPNE6-207ENST00000558541 IQGAP1P46940 1657 aa21.73■■□□□ 1.07
CPNE6-207ENST00000558541 SETD1AO15047 1707 aaKnown RBP21.72■■□□□ 1.07
CPNE6-207ENST00000558541 CCDC18Q5T9S5 1454 aa21.71■■□□□ 1.07
CPNE6-207ENST00000558541 DEPDC5O75140 1603 aa21.69■■□□□ 1.06
CPNE6-207ENST00000558541 MED14O60244 1454 aa21.69■■□□□ 1.06
CPNE6-207ENST00000558541 FAM135AQ9P2D6 1515 aa21.69■■□□□ 1.06
CPNE6-207ENST00000558541 SYNMO15061 1565 aa21.69■■□□□ 1.06
CPNE6-207ENST00000558541 UGGT1Q9NYU2 1555 aa21.69■■□□□ 1.06
CPNE6-207ENST00000558541 CFDP1Q9UEE9 299 aaPredicted RBP21.68■■□□□ 1.06
CPNE6-207ENST00000558541 PLEKHH2Q8IVE3 1493 aa21.67■■□□□ 1.06
CPNE6-207ENST00000558541 GPATCH8Q9UKJ3 1502 aaKnown RBP21.66■■□□□ 1.06
CPNE6-207ENST00000558541 KIAA1107Q9UPP5 1409 aa21.65■■□□□ 1.06
CPNE6-207ENST00000558541 PZPP20742 1482 aa21.64■■□□□ 1.06
CPNE6-207ENST00000558541 WASHC2CQ9Y4E1 1318 aa21.64■■□□□ 1.05
CPNE6-207ENST00000558541 KIF3BO15066 747 aa21.64■■□□□ 1.05
CPNE6-207ENST00000558541 MIA2Q96PC5 1412 aa21.63■■□□□ 1.05
CPNE6-207ENST00000558541 NLRP1Q9C000 1473 aa21.62■■□□□ 1.05
CPNE6-207ENST00000558541 CASKIN1Q8WXD9 1431 aa21.61■■□□□ 1.05
CPNE6-207ENST00000558541 KDM5DQ9BY66 1539 aa21.6■■□□□ 1.05
CPNE6-207ENST00000558541 CCNB3Q8WWL7 1395 aa21.59■■□□□ 1.05
CPNE6-207ENST00000558541 XIRP1Q702N8 1843 aaKnown RBP21.58■■□□□ 1.05
CPNE6-207ENST00000558541 LOC105371045A0A1W2PR82 267 aa21.58■■□□□ 1.05
CPNE6-207ENST00000558541 DHX29Q7Z478 1369 aaKnown RBP21.58■■□□□ 1.04
CPNE6-207ENST00000558541 CFAP65Q6ZU64 1925 aaKnown RBP21.56■■□□□ 1.04
CPNE6-207ENST00000558541 FAM135BQ49AJ0 1406 aa21.54■■□□□ 1.04
CPNE6-207ENST00000558541 UPF1Q92900 1129 aaKnown RBP eCLIP21.53■■□□□ 1.04
CPNE6-207ENST00000558541 ZC3H13Q5T200 1668 aaKnown RBP21.53■■□□□ 1.04
CPNE6-207ENST00000558541 ZNF644Q9H582 1327 aaPredicted RBP21.53■■□□□ 1.04
CPNE6-207ENST00000558541 RTEL1-TNFRSF6BF6WH68 1400 aa21.5■■□□□ 1.03
CPNE6-207ENST00000558541 ROBO1Q9Y6N7 1651 aa21.5■■□□□ 1.03
CPNE6-207ENST00000558541 TRIM52Q96A61 297 aa21.48■■□□□ 1.03
CPNE6-207ENST00000558541 FYCO1Q9BQS8 1478 aa21.47■■□□□ 1.03
CPNE6-207ENST00000558541 TXNDC2Q86VQ3 553 aa21.46■■□□□ 1.03
CPNE6-207ENST00000558541 SCAF11Q99590 1463 aaKnown RBP21.45■■□□□ 1.02
CPNE6-207ENST00000558541 MBD5Q9P267 1494 aa21.44■■□□□ 1.02
CPNE6-207ENST00000558541 PHLPP1O60346 1717 aa21.43■■□□□ 1.02
CPNE6-207ENST00000558541 UBR1Q8IWV7 1749 aa21.43■■□□□ 1.02
CPNE6-207ENST00000558541 MTUS2Q5JR59 1369 aa21.42■■□□□ 1.02
CPNE6-207ENST00000558541 TMEM94Q12767 1356 aa21.41■■□□□ 1.02
CPNE6-207ENST00000558541 LTKP29376 864 aa21.41■■□□□ 1.02
CPNE6-207ENST00000558541 MEX3CQ5U5Q3 659 aaKnown RBP21.41■■□□□ 1.02
CPNE6-207ENST00000558541 RBM33Q96EV2 1170 aaKnown RBP21.4■■□□□ 1.02
CPNE6-207ENST00000558541 EID1Q9Y6B2 187 aa21.4■■□□□ 1.02
CPNE6-207ENST00000558541 PROSER2Q86WR7 435 aaPredicted RBP21.39■■□□□ 1.01
CPNE6-207ENST00000558541 JCADQ9P266 1359 aa21.38■■□□□ 1.01
CPNE6-207ENST00000558541 ZNF772Q68DY9 489 aaPredicted RBP21.38■■□□□ 1.01
CPNE6-207ENST00000558541 TIAM1Q13009 1591 aa21.37■■□□□ 1.01
CPNE6-207ENST00000558541 ERVK-7P63135 1459 aa21.37■■□□□ 1.01
CPNE6-207ENST00000558541 CCDC141Q6ZP82 1450 aa21.35■■□□□ 1.01
CPNE6-207ENST00000558541 LRRC9Q6ZRR7 1453 aa21.34■■□□□ 1.01
CPNE6-207ENST00000558541 ABCC3O15438 1527 aa21.33■■□□□ 1
CPNE6-207ENST00000558541 KCNA6P17658 529 aa21.32■■□□□ 1
CPNE6-207ENST00000558541 RXRBP28702 533 aa21.32■■□□□ 1
CPNE6-207ENST00000558541 NCOA2Q15596 1464 aa21.32■■□□□ 1
CPNE6-207ENST00000558541 TSPY4P0CV99 314 aa21.31■■□□□ 1
CPNE6-207ENST00000558541 TSPY10P0CW01 314 aa21.31■■□□□ 1
CPNE6-207ENST00000558541 SLAIN2Q9P270 581 aa21.31■■□□□ 1
CPNE6-207ENST00000558541 STAG3Q9UJ98 1225 aa21.31■■□□□ 1
CPNE6-207ENST00000558541 SLIT1O75093 1534 aa21.3■■□□□ 1
CPNE6-207ENST00000558541 CEP152O94986 1710 aa21.3■■□□□ 1
CPNE6-207ENST00000558541 RSPH4AQ5TD94 716 aa21.3■■□□□ 1
CPNE6-207ENST00000558541 ARHGAP23Q9P227 1491 aa21.3■■□□□ 1
CPNE6-207ENST00000558541 MSH6P52701 1360 aa21.28■■□□□ 1
CPNE6-207ENST00000558541 MAP3K1Q13233 1512 aa21.28■■□□□ 1
CPNE6-207ENST00000558541 SLC26A8Q96RN1 970 aa21.27■■□□□ 1
CPNE6-207ENST00000558541 SPATA31A6Q5VVP1 1343 aa21.26■□□□□ 0.99
CPNE6-207ENST00000558541 CAMSAP2Q08AD1 1489 aa21.26■□□□□ 0.99
CPNE6-207ENST00000558541 LRP6O75581 1613 aa21.26■□□□□ 0.99
CPNE6-207ENST00000558541 BCANQ96GW7 911 aa21.25■□□□□ 0.99
CPNE6-207ENST00000558541 COL16A1Q07092 1604 aaPredicted RBP21.22■□□□□ 0.99
CPNE6-207ENST00000558541 CEP162Q5TB80 1403 aa21.22■□□□□ 0.99
CPNE6-207ENST00000558541 PRDM15P57071 1507 aaPredicted RBP21.22■□□□□ 0.99
CPNE6-207ENST00000558541 EHBP1L1Q8N3D4 1523 aa21.22■□□□□ 0.99
CPNE6-207ENST00000558541 SRCAPQ6ZRS2 3230 aa21.22■□□□□ 0.99
CPNE6-207ENST00000558541 PIK3C2BO00750 1634 aa21.22■□□□□ 0.99
CPNE6-207ENST00000558541 TMEM2Q9UHN6 1383 aa21.22■□□□□ 0.99
CPNE6-207ENST00000558541 NUTM2BA6NNL0 878 aaPredicted RBP21.2■□□□□ 0.98
CPNE6-207ENST00000558541 NUTM2EB1AL46 878 aaPredicted RBP21.2■□□□□ 0.98
CPNE6-207ENST00000558541 NUTM2AQ8IVF1 878 aaPredicted RBP21.2■□□□□ 0.98
CPNE6-207ENST00000558541 EIF2AK4Q9P2K8 1649 aaKnown RBP21.18■□□□□ 0.98
CPNE6-207ENST00000558541 FGD6Q6ZV73 1430 aa21.17■□□□□ 0.98
CPNE6-207ENST00000558541 NKTRP30414 1462 aaKnown RBP21.16■□□□□ 0.98
CPNE6-207ENST00000558541 CDK12Q9NYV4 1490 aaPredicted RBP21.16■□□□□ 0.98
CPNE6-207ENST00000558541 NUTM2DQ5VT03 806 aaPredicted RBP21.16■□□□□ 0.98
CPNE6-207ENST00000558541 C14orf37Q86TY3 774 aa21.16■□□□□ 0.98
CPNE6-207ENST00000558541 MROH1Q8NDA8 1641 aa21.15■□□□□ 0.98
CPNE6-207ENST00000558541 ARHGEF5Q12774 1597 aa21.15■□□□□ 0.98
CPNE6-207ENST00000558541 SHPRHQ149N8 1683 aa21.15■□□□□ 0.98
CPNE6-207ENST00000558541 AFF2P51816 1311 aa21.13■□□□□ 0.97
CPNE6-207ENST00000558541 TET3O43151 1660 aa21.13■□□□□ 0.97
CPNE6-207ENST00000558541 EFCAB6Q5THR3 1501 aa21.13■□□□□ 0.97
CPNE6-207ENST00000558541 KDM5AP29375 1690 aaKnown RBP21.12■□□□□ 0.97
CPNE6-207ENST00000558541 NWD1Q149M9 1564 aa21.11■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms