RNA–Protein interactions for RNA: ENST00000558270.1

INO80-204, Transcript of INO80 complex subunit, humanhuman

TSL 2

Gene INO80, Length 888 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
INO80-204ENST00000558270 NPHP4O75161 1426 aaPredicted RBP18.09■□□□□ 0.49
INO80-204ENST00000558270 PLEKHH2Q8IVE3 1493 aa18.08■□□□□ 0.49
INO80-204ENST00000558270 KIAA1107Q9UPP5 1409 aa18.08■□□□□ 0.49
INO80-204ENST00000558270 FBXO31Q5XUX0 539 aaPredicted RBP18.08■□□□□ 0.48
INO80-204ENST00000558270 INO80Q9ULG1 1556 aaPredicted RBP18.08■□□□□ 0.48
INO80-204ENST00000558270 CFDP1Q9UEE9 299 aaPredicted RBP18.07■□□□□ 0.48
INO80-204ENST00000558270 GPATCH8Q9UKJ3 1502 aaKnown RBP18.05■□□□□ 0.48
INO80-204ENST00000558270 CASKIN1Q8WXD9 1431 aa18.05■□□□□ 0.48
INO80-204ENST00000558270 FAM135AQ9P2D6 1515 aa18.04■□□□□ 0.48
INO80-204ENST00000558270 MED14O60244 1454 aa18.04■□□□□ 0.48
INO80-204ENST00000558270 RNF17Q9BXT8 1623 aaKnown RBP18.04■□□□□ 0.48
INO80-204ENST00000558270 LRRC7Q96NW7 1537 aa18.03■□□□□ 0.48
INO80-204ENST00000558270 PZPP20742 1482 aa18.02■□□□□ 0.48
INO80-204ENST00000558270 ADGBQ8N7X0 1667 aa18.02■□□□□ 0.47
INO80-204ENST00000558270 POTEAQ6S8J7 498 aa18.01■□□□□ 0.47
INO80-204ENST00000558270 DEPDC5O75140 1603 aa18.01■□□□□ 0.47
INO80-204ENST00000558270 NLRP1Q9C000 1473 aa18.01■□□□□ 0.47
INO80-204ENST00000558270 WASHC2CQ9Y4E1 1318 aa18■□□□□ 0.47
INO80-204ENST00000558270 UGGT1Q9NYU2 1555 aa18■□□□□ 0.47
INO80-204ENST00000558270 CCNB3Q8WWL7 1395 aa18■□□□□ 0.47
INO80-204ENST00000558270 SYNMO15061 1565 aa18■□□□□ 0.47
INO80-204ENST00000558270 MIA2Q96PC5 1412 aa17.99■□□□□ 0.47
INO80-204ENST00000558270 KIF3BO15066 747 aa17.99■□□□□ 0.47
INO80-204ENST00000558270 IQGAP1P46940 1657 aa17.99■□□□□ 0.47
INO80-204ENST00000558270 KDM5DQ9BY66 1539 aa17.98■□□□□ 0.47
INO80-204ENST00000558270 DHX29Q7Z478 1369 aaKnown RBP17.97■□□□□ 0.47
INO80-204ENST00000558270 RTEL1-TNFRSF6BF6WH68 1400 aa17.93■□□□□ 0.46
INO80-204ENST00000558270 STRCP1A6NGW2 1772 aa17.93■□□□□ 0.46
INO80-204ENST00000558270 FYCO1Q9BQS8 1478 aa17.93■□□□□ 0.46
INO80-204ENST00000558270 ZNF644Q9H582 1327 aaPredicted RBP17.91■□□□□ 0.46
INO80-204ENST00000558270 FAM135BQ49AJ0 1406 aa17.89■□□□□ 0.46
INO80-204ENST00000558270 MTUS2Q5JR59 1369 aa17.87■□□□□ 0.45
INO80-204ENST00000558270 MBD5Q9P267 1494 aa17.87■□□□□ 0.45
INO80-204ENST00000558270 SETD1AO15047 1707 aaKnown RBP17.86■□□□□ 0.45
INO80-204ENST00000558270 SCAF11Q99590 1463 aaKnown RBP17.84■□□□□ 0.45
INO80-204ENST00000558270 CEP162Q5TB80 1403 aa17.84■□□□□ 0.45
INO80-204ENST00000558270 TXNDC2Q86VQ3 553 aa17.83■□□□□ 0.44
INO80-204ENST00000558270 LOC105371045A0A1W2PR82 267 aa17.82■□□□□ 0.44
INO80-204ENST00000558270 ZC3H13Q5T200 1668 aaKnown RBP17.82■□□□□ 0.44
INO80-204ENST00000558270 UPF1Q92900 1129 aaKnown RBP eCLIP17.81■□□□□ 0.44
INO80-204ENST00000558270 CCDC141Q6ZP82 1450 aa17.81■□□□□ 0.44
INO80-204ENST00000558270 EID1Q9Y6B2 187 aa17.8■□□□□ 0.44
INO80-204ENST00000558270 RSPH4AQ5TD94 716 aa17.79■□□□□ 0.44
INO80-204ENST00000558270 TMEM94Q12767 1356 aa17.79■□□□□ 0.44
INO80-204ENST00000558270 ERVK-7P63135 1459 aa17.78■□□□□ 0.44
INO80-204ENST00000558270 LTKP29376 864 aa17.78■□□□□ 0.44
INO80-204ENST00000558270 TIAM1Q13009 1591 aa17.78■□□□□ 0.44
INO80-204ENST00000558270 TRIM52Q96A61 297 aa17.77■□□□□ 0.44
INO80-204ENST00000558270 ROBO1Q9Y6N7 1651 aa17.77■□□□□ 0.43
INO80-204ENST00000558270 LRRC9Q6ZRR7 1453 aa17.76■□□□□ 0.43
INO80-204ENST00000558270 TSPY4P0CV99 314 aa17.76■□□□□ 0.43
INO80-204ENST00000558270 TSPY10P0CW01 314 aa17.76■□□□□ 0.43
INO80-204ENST00000558270 XIRP1Q702N8 1843 aaKnown RBP17.76■□□□□ 0.43
INO80-204ENST00000558270 JCADQ9P266 1359 aa17.76■□□□□ 0.43
INO80-204ENST00000558270 MEX3CQ5U5Q3 659 aaKnown RBP17.75■□□□□ 0.43
INO80-204ENST00000558270 PROSER2Q86WR7 435 aaPredicted RBP17.75■□□□□ 0.43
INO80-204ENST00000558270 ABCC3O15438 1527 aa17.75■□□□□ 0.43
INO80-204ENST00000558270 ZNF772Q68DY9 489 aaPredicted RBP17.74■□□□□ 0.43
INO80-204ENST00000558270 UBR1Q8IWV7 1749 aa17.73■□□□□ 0.43
INO80-204ENST00000558270 NCOA2Q15596 1464 aa17.73■□□□□ 0.43
INO80-204ENST00000558270 SLIT1O75093 1534 aa17.72■□□□□ 0.43
INO80-204ENST00000558270 ARHGAP23Q9P227 1491 aa17.72■□□□□ 0.43
INO80-204ENST00000558270 KCNA6P17658 529 aa17.72■□□□□ 0.43
INO80-204ENST00000558270 RBM33Q96EV2 1170 aaKnown RBP17.71■□□□□ 0.43
INO80-204ENST00000558270 STAG3Q9UJ98 1225 aa17.71■□□□□ 0.43
INO80-204ENST00000558270 EHBP1L1Q8N3D4 1523 aa17.71■□□□□ 0.43
INO80-204ENST00000558270 CAMSAP2Q08AD1 1489 aa17.7■□□□□ 0.42
INO80-204ENST00000558270 MSH6P52701 1360 aa17.69■□□□□ 0.42
INO80-204ENST00000558270 PHLPP1O60346 1717 aa17.68■□□□□ 0.42
INO80-204ENST00000558270 SLAIN2Q9P270 581 aa17.68■□□□□ 0.42
INO80-204ENST00000558270 RXRBP28702 533 aa17.67■□□□□ 0.42
INO80-204ENST00000558270 SPATA31A6Q5VVP1 1343 aa17.67■□□□□ 0.42
INO80-204ENST00000558270 MAP3K1Q13233 1512 aa17.67■□□□□ 0.42
INO80-204ENST00000558270 TMEM2Q9UHN6 1383 aa17.66■□□□□ 0.42
INO80-204ENST00000558270 SLC26A8Q96RN1 970 aa17.66■□□□□ 0.42
INO80-204ENST00000558270 PRDM15P57071 1507 aaPredicted RBP17.64■□□□□ 0.41
INO80-204ENST00000558270 VPS8Q8N3P4 1428 aa17.64■□□□□ 0.41
INO80-204ENST00000558270 BCANQ96GW7 911 aa17.63■□□□□ 0.41
INO80-204ENST00000558270 NKTRP30414 1462 aaKnown RBP17.63■□□□□ 0.41
INO80-204ENST00000558270 CFAP65Q6ZU64 1925 aaKnown RBP17.62■□□□□ 0.41
INO80-204ENST00000558270 ARHGEF5Q12774 1597 aa17.62■□□□□ 0.41
INO80-204ENST00000558270 LRP6O75581 1613 aa17.62■□□□□ 0.41
INO80-204ENST00000558270 SRCAPQ6ZRS2 3230 aa17.62■□□□□ 0.41
INO80-204ENST00000558270 FGD6Q6ZV73 1430 aa17.61■□□□□ 0.41
INO80-204ENST00000558270 EIF2AK4Q9P2K8 1649 aaKnown RBP17.61■□□□□ 0.41
INO80-204ENST00000558270 CEP152O94986 1710 aa17.61■□□□□ 0.41
INO80-204ENST00000558270 COL16A1Q07092 1604 aaPredicted RBP17.58■□□□□ 0.41
INO80-204ENST00000558270 MROH1Q8NDA8 1641 aa17.58■□□□□ 0.41
INO80-204ENST00000558270 ARHGAP31Q2M1Z3 1444 aa17.58■□□□□ 0.41
INO80-204ENST00000558270 PIK3C2BO00750 1634 aa17.58■□□□□ 0.4
INO80-204ENST00000558270 EFCAB6Q5THR3 1501 aa17.57■□□□□ 0.4
INO80-204ENST00000558270 CDK12Q9NYV4 1490 aaPredicted RBP17.57■□□□□ 0.4
INO80-204ENST00000558270 C14orf37Q86TY3 774 aa17.57■□□□□ 0.4
INO80-204ENST00000558270 NWD1Q149M9 1564 aa17.55■□□□□ 0.4
INO80-204ENST00000558270 NUTM2BA6NNL0 878 aaPredicted RBP17.55■□□□□ 0.4
INO80-204ENST00000558270 NUTM2EB1AL46 878 aaPredicted RBP17.55■□□□□ 0.4
INO80-204ENST00000558270 NUTM2AQ8IVF1 878 aaPredicted RBP17.55■□□□□ 0.4
INO80-204ENST00000558270 TET3O43151 1660 aa17.55■□□□□ 0.4
INO80-204ENST00000558270 MAST1Q9Y2H9 1570 aa17.54■□□□□ 0.4
INO80-204ENST00000558270 FOXD1Q16676 465 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms