RNA–Protein interactions for RNA: ENST00000558077.1

ALPK3-202, Transcript of alpha kinase 3, humanhuman

TSL 3

Gene ALPK3, Length 487 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALPK3-202ENST00000558077 RNF17Q9BXT8 1623 aaKnown RBP21.01■□□□□ 0.95
ALPK3-202ENST00000558077 EIF2AK4Q9P2K8 1649 aaKnown RBP21.01■□□□□ 0.95
ALPK3-202ENST00000558077 MROH1Q8NDA8 1641 aa21■□□□□ 0.95
ALPK3-202ENST00000558077 PTPRKQ15262 1439 aa21■□□□□ 0.95
ALPK3-202ENST00000558077 KIF15Q9NS87 1388 aa20.99■□□□□ 0.95
ALPK3-202ENST00000558077 NPATQ14207 1427 aa20.99■□□□□ 0.95
ALPK3-202ENST00000558077 SOCS7O14512 581 aa20.99■□□□□ 0.95
ALPK3-202ENST00000558077 FAM50AQ14320 339 aaKnown RBP20.99■□□□□ 0.95
ALPK3-202ENST00000558077 RRP7BPQ9NSQ0 103 aa20.99■□□□□ 0.95
ALPK3-202ENST00000558077 NCOA1Q15788 1441 aa20.98■□□□□ 0.95
ALPK3-202ENST00000558077 CHIC2Q9UKJ5 165 aa20.98■□□□□ 0.95
ALPK3-202ENST00000558077 FAM135AQ9P2D6 1515 aa20.98■□□□□ 0.95
ALPK3-202ENST00000558077 ADGRL2O95490 1459 aa20.97■□□□□ 0.95
ALPK3-202ENST00000558077 KDM5DQ9BY66 1539 aa20.96■□□□□ 0.95
ALPK3-202ENST00000558077 UHRF1BP1Q6BDS2 1440 aa20.95■□□□□ 0.95
ALPK3-202ENST00000558077 ANKRD30AQ9BXX3 1397 aa20.94■□□□□ 0.94
ALPK3-202ENST00000558077 ERBINQ96RT1 1412 aa20.94■□□□□ 0.94
ALPK3-202ENST00000558077 WASHC2CQ9Y4E1 1318 aa20.93■□□□□ 0.94
ALPK3-202ENST00000558077 ABCC3O15438 1527 aa20.93■□□□□ 0.94
ALPK3-202ENST00000558077 PZPP20742 1482 aa20.91■□□□□ 0.94
ALPK3-202ENST00000558077 FBXO31Q5XUX0 539 aaPredicted RBP20.91■□□□□ 0.94
ALPK3-202ENST00000558077 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.91■□□□□ 0.94
ALPK3-202ENST00000558077 STRCQ7RTU9 1775 aa20.9■□□□□ 0.94
ALPK3-202ENST00000558077 DEPDC5O75140 1603 aa20.9■□□□□ 0.94
ALPK3-202ENST00000558077 CEP152O94986 1710 aa20.89■□□□□ 0.93
ALPK3-202ENST00000558077 PRDM15P57071 1507 aaPredicted RBP20.88■□□□□ 0.93
ALPK3-202ENST00000558077 ZC3H13Q5T200 1668 aaKnown RBP20.88■□□□□ 0.93
ALPK3-202ENST00000558077 MYO3AQ8NEV4 1616 aa20.88■□□□□ 0.93
ALPK3-202ENST00000558077 RRBP1Q9P2E9 1410 aaKnown RBP20.87■□□□□ 0.93
ALPK3-202ENST00000558077 ZNF142P52746 1687 aaPredicted RBP20.86■□□□□ 0.93
ALPK3-202ENST00000558077 VWDEQ8N2E2 1590 aa20.85■□□□□ 0.93
ALPK3-202ENST00000558077 ILDR2Q71H61 639 aa20.84■□□□□ 0.93
ALPK3-202ENST00000558077 CAMSAP1Q5T5Y3 1602 aa20.84■□□□□ 0.93
ALPK3-202ENST00000558077 ROCK1Q13464 1354 aa20.84■□□□□ 0.93
ALPK3-202ENST00000558077 CEP170BQ9Y4F5 1589 aaPredicted RBP20.83■□□□□ 0.92
ALPK3-202ENST00000558077 TNRQ92752 1358 aa20.83■□□□□ 0.92
ALPK3-202ENST00000558077 CFAP65Q6ZU64 1925 aaKnown RBP20.82■□□□□ 0.92
ALPK3-202ENST00000558077 ANKRD50Q9ULJ7 1429 aa20.82■□□□□ 0.92
ALPK3-202ENST00000558077 SPATA31D1Q6ZQQ2 1576 aa20.81■□□□□ 0.92
ALPK3-202ENST00000558077 DISP3Q9P2K9 1392 aa20.81■□□□□ 0.92
ALPK3-202ENST00000558077 ARHGAP31Q2M1Z3 1444 aa20.8■□□□□ 0.92
ALPK3-202ENST00000558077 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.8■□□□□ 0.92
ALPK3-202ENST00000558077 A2ML1A8K2U0 1454 aa20.8■□□□□ 0.92
ALPK3-202ENST00000558077 LMTK2Q8IWU2 1503 aa20.79■□□□□ 0.92
ALPK3-202ENST00000558077 CERKQ8TCT0 537 aa20.79■□□□□ 0.92
ALPK3-202ENST00000558077 ERVK-7P63135 1459 aa20.79■□□□□ 0.92
ALPK3-202ENST00000558077 ITGAEP38570 1179 aa20.78■□□□□ 0.92
ALPK3-202ENST00000558077 PLA2R1Q13018 1463 aa20.75■□□□□ 0.91
ALPK3-202ENST00000558077 NLRP1Q9C000 1473 aa20.74■□□□□ 0.91
ALPK3-202ENST00000558077 KANK1Q14678 1352 aa20.73■□□□□ 0.91
ALPK3-202ENST00000558077 UNC13BO14795 1591 aa20.73■□□□□ 0.91
ALPK3-202ENST00000558077 PTPRTO14522 1441 aa20.73■□□□□ 0.91
ALPK3-202ENST00000558077 NCKAP5LQ9HCH0 1330 aa20.72■□□□□ 0.91
ALPK3-202ENST00000558077 DMRT2Q9Y5R5 561 aa20.71■□□□□ 0.91
ALPK3-202ENST00000558077 EFCAB6Q5THR3 1501 aa20.7■□□□□ 0.9
ALPK3-202ENST00000558077 UGGT1Q9NYU2 1555 aa20.68■□□□□ 0.9
ALPK3-202ENST00000558077 PKD2Q13563 968 aa20.67■□□□□ 0.9
ALPK3-202ENST00000558077 NOS1P29475 1434 aa20.67■□□□□ 0.9
ALPK3-202ENST00000558077 TET3O43151 1660 aa20.66■□□□□ 0.9
ALPK3-202ENST00000558077 UBR1Q8IWV7 1749 aa20.65■□□□□ 0.9
ALPK3-202ENST00000558077 SYNMO15061 1565 aa20.65■□□□□ 0.9
ALPK3-202ENST00000558077 NAIPQ13075 1403 aa20.65■□□□□ 0.9
ALPK3-202ENST00000558077 IQGAP3Q86VI3 1631 aa20.64■□□□□ 0.9
ALPK3-202ENST00000558077 NEURL4Q96JN8 1562 aa20.64■□□□□ 0.9
ALPK3-202ENST00000558077 THEMISQ8N1K5 641 aaPredicted RBP20.64■□□□□ 0.89
ALPK3-202ENST00000558077 GCC2Q8IWJ2 1684 aa20.63■□□□□ 0.89
ALPK3-202ENST00000558077 RPRD2Q5VT52 1461 aaKnown RBP20.62■□□□□ 0.89
ALPK3-202ENST00000558077 POLR1AO95602 1720 aaPredicted RBP20.61■□□□□ 0.89
ALPK3-202ENST00000558077 PIK3C2BO00750 1634 aa20.61■□□□□ 0.89
ALPK3-202ENST00000558077 IDI1Q13907 227 aa20.61■□□□□ 0.89
ALPK3-202ENST00000558077 E9PCH4 1651 aa20.61■□□□□ 0.89
ALPK3-202ENST00000558077 LTBP4Q8N2S1 1624 aa20.6■□□□□ 0.89
ALPK3-202ENST00000558077 NUP155O75694 1391 aa20.59■□□□□ 0.89
ALPK3-202ENST00000558077 ARHGAP23Q9P227 1491 aa20.58■□□□□ 0.89
ALPK3-202ENST00000558077 HFM1A2PYH4 1435 aa20.58■□□□□ 0.88
ALPK3-202ENST00000558077 MED14O60244 1454 aa20.57■□□□□ 0.88
ALPK3-202ENST00000558077 ANKLE2Q86XL3 938 aa20.57■□□□□ 0.88
ALPK3-202ENST00000558077 SLIT1O75093 1534 aa20.56■□□□□ 0.88
ALPK3-202ENST00000558077 KDM5AP29375 1690 aaKnown RBP20.55■□□□□ 0.88
ALPK3-202ENST00000558077 ZNF335Q9H4Z2 1342 aaPredicted RBP20.53■□□□□ 0.88
ALPK3-202ENST00000558077 LTKP29376 864 aa20.53■□□□□ 0.88
ALPK3-202ENST00000558077 SLC52A1Q9NWF4 448 aa20.53■□□□□ 0.88
ALPK3-202ENST00000558077 NPHP4O75161 1426 aaPredicted RBP20.53■□□□□ 0.88
ALPK3-202ENST00000558077 TMEM2Q9UHN6 1383 aa20.5■□□□□ 0.87
ALPK3-202ENST00000558077 ADGRB3O60242 1522 aa20.5■□□□□ 0.87
ALPK3-202ENST00000558077 MYO5BQ9ULV0 1848 aa20.5■□□□□ 0.87
ALPK3-202ENST00000558077 SCAF11Q99590 1463 aaKnown RBP20.49■□□□□ 0.87
ALPK3-202ENST00000558077 IQGAP1P46940 1657 aa20.48■□□□□ 0.87
ALPK3-202ENST00000558077 TMEM131LA2VDJ0 1609 aa20.48■□□□□ 0.87
ALPK3-202ENST00000558077 TXNDC2Q86VQ3 553 aa20.47■□□□□ 0.87
ALPK3-202ENST00000558077 STAG3Q9UJ98 1225 aa20.45■□□□□ 0.86
ALPK3-202ENST00000558077 SPHKAPQ2M3C7 1700 aa20.44■□□□□ 0.86
ALPK3-202ENST00000558077 STRCP1A6NGW2 1772 aa20.43■□□□□ 0.86
ALPK3-202ENST00000558077 ZFYVE9O95405 1425 aa20.42■□□□□ 0.86
ALPK3-202ENST00000558077 IQSEC2Q5JU85 1478 aa20.41■□□□□ 0.86
ALPK3-202ENST00000558077 TRIM52Q96A61 297 aa20.4■□□□□ 0.86
ALPK3-202ENST00000558077 EID1Q9Y6B2 187 aa20.4■□□□□ 0.86
ALPK3-202ENST00000558077 RIMS2Q9UQ26 1411 aa20.37■□□□□ 0.85
ALPK3-202ENST00000558077 CLTCL1P53675 1640 aa20.36■□□□□ 0.85
ALPK3-202ENST00000558077 TRPM2O94759 1503 aa20.36■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms