RNA–Protein interactions for RNA: ENST00000557978.6

PBX4-202, Transcript of PBX homeobox 4, humanhuman

TSL 1 (best)

Gene PBX4, Length 1,416 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX4-202ENST00000557978 ROCK1Q13464 1354 aa25.42■■□□□ 1.66
PBX4-202ENST00000557978 RNF17Q9BXT8 1623 aaKnown RBP25.41■■□□□ 1.66
PBX4-202ENST00000557978 MROH2AA6NES4 1674 aa25.41■■□□□ 1.66
PBX4-202ENST00000557978 CLTCQ00610 1675 aaKnown RBP25.4■■□□□ 1.66
PBX4-202ENST00000557978 CNTLNQ9NXG0 1405 aa25.4■■□□□ 1.66
PBX4-202ENST00000557978 FAM135AQ9P2D6 1515 aa25.38■■□□□ 1.65
PBX4-202ENST00000557978 SETD1BQ9UPS6 1966 aaKnown RBP25.37■■□□□ 1.65
PBX4-202ENST00000557978 C3P01024 1663 aa25.36■■□□□ 1.65
PBX4-202ENST00000557978 DEPDC5O75140 1603 aa25.34■■□□□ 1.65
PBX4-202ENST00000557978 ZC3H13Q5T200 1668 aaKnown RBP25.34■■□□□ 1.65
PBX4-202ENST00000557978 ANKRD50Q9ULJ7 1429 aa25.34■■□□□ 1.65
PBX4-202ENST00000557978 KDM5DQ9BY66 1539 aa25.32■■□□□ 1.64
PBX4-202ENST00000557978 MROH1Q8NDA8 1641 aa25.31■■□□□ 1.64
PBX4-202ENST00000557978 WASHC2CQ9Y4E1 1318 aa25.3■■□□□ 1.64
PBX4-202ENST00000557978 CEP152O94986 1710 aa25.3■■□□□ 1.64
PBX4-202ENST00000557978 GCC2Q8IWJ2 1684 aa25.29■■□□□ 1.64
PBX4-202ENST00000557978 PRDM15P57071 1507 aaPredicted RBP25.29■■□□□ 1.64
PBX4-202ENST00000557978 ZMYM3Q14202 1370 aa25.28■■□□□ 1.64
PBX4-202ENST00000557978 PLPPR3Q6T4P5 718 aa25.28■■□□□ 1.64
PBX4-202ENST00000557978 CFAP65Q6ZU64 1925 aaKnown RBP25.26■■□□□ 1.63
PBX4-202ENST00000557978 KANK1Q14678 1352 aa25.26■■□□□ 1.63
PBX4-202ENST00000557978 CEBPAP49715 358 aaPredicted RBP25.25■■□□□ 1.63
PBX4-202ENST00000557978 ABCC3O15438 1527 aa25.23■■□□□ 1.63
PBX4-202ENST00000557978 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.23■■□□□ 1.63
PBX4-202ENST00000557978 CAMSAP1Q5T5Y3 1602 aa25.22■■□□□ 1.63
PBX4-202ENST00000557978 UNC13BO14795 1591 aa25.21■■□□□ 1.63
PBX4-202ENST00000557978 PREX1Q8TCU6 1659 aa25.21■■□□□ 1.63
PBX4-202ENST00000557978 HFM1A2PYH4 1435 aa25.2■■□□□ 1.62
PBX4-202ENST00000557978 NAIPQ13075 1403 aa25.2■■□□□ 1.62
PBX4-202ENST00000557978 VWDEQ8N2E2 1590 aa25.19■■□□□ 1.62
PBX4-202ENST00000557978 NPATQ14207 1427 aa25.17■■□□□ 1.62
PBX4-202ENST00000557978 PZPP20742 1482 aa25.16■■□□□ 1.62
PBX4-202ENST00000557978 LMTK2Q8IWU2 1503 aa25.15■■□□□ 1.62
PBX4-202ENST00000557978 IQGAP3Q86VI3 1631 aa25.13■■□□□ 1.61
PBX4-202ENST00000557978 TET3O43151 1660 aa25.12■■□□□ 1.61
PBX4-202ENST00000557978 ARHGAP31Q2M1Z3 1444 aa25.11■■□□□ 1.61
PBX4-202ENST00000557978 UHRF1BP1Q6BDS2 1440 aa25.09■■□□□ 1.61
PBX4-202ENST00000557978 NUP155O75694 1391 aa25.08■■□□□ 1.61
PBX4-202ENST00000557978 EFCAB6Q5THR3 1501 aa25.07■■□□□ 1.6
PBX4-202ENST00000557978 MYO3AQ8NEV4 1616 aa25.07■■□□□ 1.6
PBX4-202ENST00000557978 LMTK3Q96Q04 1460 aa25.07■■□□□ 1.6
PBX4-202ENST00000557978 SPATA31D1Q6ZQQ2 1576 aa25.05■■□□□ 1.6
PBX4-202ENST00000557978 FBXO31Q5XUX0 539 aaPredicted RBP25.05■■□□□ 1.6
PBX4-202ENST00000557978 ACIN1Q9UKV3 1341 aaKnown RBP25.05■■□□□ 1.6
PBX4-202ENST00000557978 ZNF142P52746 1687 aaPredicted RBP25.04■■□□□ 1.6
PBX4-202ENST00000557978 TNRQ92752 1358 aa25.03■■□□□ 1.6
PBX4-202ENST00000557978 RPRD2Q5VT52 1461 aaKnown RBP25.03■■□□□ 1.6
PBX4-202ENST00000557978 SETD5Q9C0A6 1442 aa25.03■■□□□ 1.6
PBX4-202ENST00000557978 E9PCH4 1651 aa25.02■■□□□ 1.6
PBX4-202ENST00000557978 ERVK-7P63135 1459 aa25.02■■□□□ 1.6
PBX4-202ENST00000557978 TRIM52Q96A61 297 aa25■■□□□ 1.59
PBX4-202ENST00000557978 CEP170BQ9Y4F5 1589 aaPredicted RBP24.99■■□□□ 1.59
PBX4-202ENST00000557978 NLRP1Q9C000 1473 aa24.97■■□□□ 1.59
PBX4-202ENST00000557978 A2ML1A8K2U0 1454 aa24.96■■□□□ 1.59
PBX4-202ENST00000557978 RAB3GAP2Q9H2M9 1393 aa24.92■■□□□ 1.58
PBX4-202ENST00000557978 NOS1P29475 1434 aa24.92■■□□□ 1.58
PBX4-202ENST00000557978 SPHKAPQ2M3C7 1700 aa24.92■■□□□ 1.58
PBX4-202ENST00000557978 HSPA2P54652 639 aa24.92■■□□□ 1.58
PBX4-202ENST00000557978 SYNMO15061 1565 aa24.9■■□□□ 1.58
PBX4-202ENST00000557978 TRIM26Q12899 539 aaPredicted RBP24.9■■□□□ 1.58
PBX4-202ENST00000557978 UGGT1Q9NYU2 1555 aa24.89■■□□□ 1.58
PBX4-202ENST00000557978 SLC4A1APQ9BWU0 796 aaKnown RBP24.89■■□□□ 1.58
PBX4-202ENST00000557978 KDM5AP29375 1690 aaKnown RBP24.89■■□□□ 1.57
PBX4-202ENST00000557978 UBR1Q8IWV7 1749 aa24.89■■□□□ 1.57
PBX4-202ENST00000557978 HRCP23327 699 aa24.88■■□□□ 1.57
PBX4-202ENST00000557978 PIK3C2BO00750 1634 aa24.87■■□□□ 1.57
PBX4-202ENST00000557978 SLC52A1Q9NWF4 448 aa24.86■■□□□ 1.57
PBX4-202ENST00000557978 STRCQ7RTU9 1775 aa24.86■■□□□ 1.57
PBX4-202ENST00000557978 THEMISQ8N1K5 641 aaPredicted RBP24.85■■□□□ 1.57
PBX4-202ENST00000557978 PKD2Q13563 968 aa24.84■■□□□ 1.57
PBX4-202ENST00000557978 MYO5BQ9ULV0 1848 aa24.83■■□□□ 1.57
PBX4-202ENST00000557978 PLA2R1Q13018 1463 aa24.83■■□□□ 1.56
PBX4-202ENST00000557978 IDI1Q13907 227 aa24.82■■□□□ 1.56
PBX4-202ENST00000557978 POLR1AO95602 1720 aaPredicted RBP24.82■■□□□ 1.56
PBX4-202ENST00000557978 MPHOSPH9Q99550 1183 aa24.81■■□□□ 1.56
PBX4-202ENST00000557978 STAG3Q9UJ98 1225 aa24.81■■□□□ 1.56
PBX4-202ENST00000557978 PTPRTO14522 1441 aa24.8■■□□□ 1.56
PBX4-202ENST00000557978 KIF1BO60333 1816 aa24.79■■□□□ 1.56
PBX4-202ENST00000557978 ADGRB3O60242 1522 aa24.77■■□□□ 1.56
PBX4-202ENST00000557978 TRPM2O94759 1503 aa24.77■■□□□ 1.56
PBX4-202ENST00000557978 DMRT2Q9Y5R5 561 aa24.76■■□□□ 1.55
PBX4-202ENST00000557978 TMEM131LA2VDJ0 1609 aa24.74■■□□□ 1.55
PBX4-202ENST00000557978 ANKLE2Q86XL3 938 aa24.72■■□□□ 1.55
PBX4-202ENST00000557978 SLIT1O75093 1534 aa24.72■■□□□ 1.55
PBX4-202ENST00000557978 CLTCL1P53675 1640 aa24.71■■□□□ 1.55
PBX4-202ENST00000557978 NCKAP5LQ9HCH0 1330 aa24.69■■□□□ 1.54
PBX4-202ENST00000557978 ARHGAP23Q9P227 1491 aa24.69■■□□□ 1.54
PBX4-202ENST00000557978 CHGAP10645 457 aaKnown RBP24.69■■□□□ 1.54
PBX4-202ENST00000557978 FOXD1Q16676 465 aa24.69■■□□□ 1.54
PBX4-202ENST00000557978 TMEM2Q9UHN6 1383 aa24.67■■□□□ 1.54
PBX4-202ENST00000557978 EID1Q9Y6B2 187 aa24.66■■□□□ 1.54
PBX4-202ENST00000557978 NEURL4Q96JN8 1562 aa24.65■■□□□ 1.54
PBX4-202ENST00000557978 IQGAP1P46940 1657 aa24.64■■□□□ 1.54
PBX4-202ENST00000557978 HDGFP51858 240 aaKnown RBP24.64■■□□□ 1.54
PBX4-202ENST00000557978 MED14O60244 1454 aa24.63■■□□□ 1.53
PBX4-202ENST00000557978 SCAF11Q99590 1463 aaKnown RBP24.63■■□□□ 1.53
PBX4-202ENST00000557978 CCDC144AA2RUR9 1427 aa24.63■■□□□ 1.53
PBX4-202ENST00000557978 TXNDC2Q86VQ3 553 aa24.63■■□□□ 1.53
PBX4-202ENST00000557978 NPHP4O75161 1426 aaPredicted RBP24.59■■□□□ 1.53
PBX4-202ENST00000557978 LTKP29376 864 aa24.59■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms