RNA–Protein interactions for RNA: ENST00000557592.5

APEX1-220, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 5

Gene APEX1, Length 640 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-220ENST00000557592 HFM1A2PYH4 1435 aa17.08■□□□□ 0.32
APEX1-220ENST00000557592 NAIPQ13075 1403 aa17.08■□□□□ 0.32
APEX1-220ENST00000557592 ESF1Q9H501 851 aaKnown RBP17.08■□□□□ 0.32
APEX1-220ENST00000557592 DEPDC5O75140 1603 aa17.06■□□□□ 0.32
APEX1-220ENST00000557592 MROH1Q8NDA8 1641 aa17.06■□□□□ 0.32
APEX1-220ENST00000557592 CLTCQ00610 1675 aaKnown RBP17.05■□□□□ 0.32
APEX1-220ENST00000557592 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.05■□□□□ 0.321e-8■□□□□ 10
APEX1-220ENST00000557592 PRDM15P57071 1507 aaPredicted RBP17.04■□□□□ 0.32
APEX1-220ENST00000557592 KDM5DQ9BY66 1539 aa17.04■□□□□ 0.32
APEX1-220ENST00000557592 PPP6R1Q9UPN7 881 aa17.03■□□□□ 0.32
APEX1-220ENST00000557592 CNTLNQ9NXG0 1405 aa17.03■□□□□ 0.32
APEX1-220ENST00000557592 KANK1Q14678 1352 aa17.02■□□□□ 0.32
APEX1-220ENST00000557592 WASHC2CQ9Y4E1 1318 aa17.02■□□□□ 0.32
APEX1-220ENST00000557592 PTPRMP28827 1452 aa17.02■□□□□ 0.32
APEX1-220ENST00000557592 TRIM26Q12899 539 aaPredicted RBP17.02■□□□□ 0.32
APEX1-220ENST00000557592 UNC13BO14795 1591 aa17.02■□□□□ 0.31
APEX1-220ENST00000557592 FAM135AQ9P2D6 1515 aa17.01■□□□□ 0.31
APEX1-220ENST00000557592 CEP152O94986 1710 aa17.01■□□□□ 0.31
APEX1-220ENST00000557592 ABCC3O15438 1527 aa17.01■□□□□ 0.31
APEX1-220ENST00000557592 MROH2AA6NES4 1674 aa17.01■□□□□ 0.31
APEX1-220ENST00000557592 ZC3H13Q5T200 1668 aaKnown RBP17.01■□□□□ 0.31
APEX1-220ENST00000557592 PLPPR3Q6T4P5 718 aa17■□□□□ 0.31
APEX1-220ENST00000557592 SETD5Q9C0A6 1442 aa16.98■□□□□ 0.31
APEX1-220ENST00000557592 VWDEQ8N2E2 1590 aa16.98■□□□□ 0.31
APEX1-220ENST00000557592 C3P01024 1663 aa16.97■□□□□ 0.31
APEX1-220ENST00000557592 CEBPAP49715 358 aaPredicted RBP16.97■□□□□ 0.31
APEX1-220ENST00000557592 CAMSAP1Q5T5Y3 1602 aa16.96■□□□□ 0.31
APEX1-220ENST00000557592 NUP155O75694 1391 aa16.96■□□□□ 0.31
APEX1-220ENST00000557592 ZMYM3Q14202 1370 aa16.96■□□□□ 0.31
APEX1-220ENST00000557592 TRIM52Q96A61 297 aa16.95■□□□□ 0.3
APEX1-220ENST00000557592 IQGAP3Q86VI3 1631 aa16.95■□□□□ 0.3
APEX1-220ENST00000557592 RAB3GAP2Q9H2M9 1393 aa16.94■□□□□ 0.3
APEX1-220ENST00000557592 AEBP2Q6ZN18 517 aaPredicted RBP16.94■□□□□ 0.3
APEX1-220ENST00000557592 LMTK2Q8IWU2 1503 aa16.94■□□□□ 0.3
APEX1-220ENST00000557592 PZPP20742 1482 aa16.92■□□□□ 0.3
APEX1-220ENST00000557592 TET3O43151 1660 aa16.91■□□□□ 0.3
APEX1-220ENST00000557592 CFAP65Q6ZU64 1925 aaKnown RBP16.91■□□□□ 0.3
APEX1-220ENST00000557592 EFCAB6Q5THR3 1501 aa16.91■□□□□ 0.3
APEX1-220ENST00000557592 NPATQ14207 1427 aa16.88■□□□□ 0.29
APEX1-220ENST00000557592 ARHGAP31Q2M1Z3 1444 aa16.88■□□□□ 0.29
APEX1-220ENST00000557592 FBXO31Q5XUX0 539 aaPredicted RBP16.88■□□□□ 0.29
APEX1-220ENST00000557592 ACIN1Q9UKV3 1341 aaKnown RBP16.87■□□□□ 0.29
APEX1-220ENST00000557592 E9PCH4 1651 aa16.86■□□□□ 0.29
APEX1-220ENST00000557592 PREX1Q8TCU6 1659 aa16.86■□□□□ 0.29
APEX1-220ENST00000557592 ERVK-7P63135 1459 aa16.86■□□□□ 0.29
APEX1-220ENST00000557592 SETD1BQ9UPS6 1966 aaKnown RBP16.86■□□□□ 0.29
APEX1-220ENST00000557592 SLC4A1APQ9BWU0 796 aaKnown RBP16.85■□□□□ 0.29
APEX1-220ENST00000557592 HRCP23327 699 aa16.84■□□□□ 0.29
APEX1-220ENST00000557592 PCGF6Q9BYE7 350 aa16.84■□□□□ 0.29
APEX1-220ENST00000557592 TNRQ92752 1358 aa16.84■□□□□ 0.29
APEX1-220ENST00000557592 RPRD2Q5VT52 1461 aaKnown RBP16.84■□□□□ 0.29
APEX1-220ENST00000557592 SPATA31D1Q6ZQQ2 1576 aa16.83■□□□□ 0.28
APEX1-220ENST00000557592 MYO3AQ8NEV4 1616 aa16.81■□□□□ 0.28
APEX1-220ENST00000557592 PKD2Q13563 968 aa16.81■□□□□ 0.28
APEX1-220ENST00000557592 MPHOSPH9Q99550 1183 aa16.81■□□□□ 0.28
APEX1-220ENST00000557592 UHRF1BP1Q6BDS2 1440 aa16.8■□□□□ 0.28
APEX1-220ENST00000557592 SYNMO15061 1565 aa16.79■□□□□ 0.28
APEX1-220ENST00000557592 NOS1P29475 1434 aa16.79■□□□□ 0.28
APEX1-220ENST00000557592 SPHKAPQ2M3C7 1700 aa16.78■□□□□ 0.28
APEX1-220ENST00000557592 FOXD1Q16676 465 aa16.77■□□□□ 0.28
APEX1-220ENST00000557592 LMTK3Q96Q04 1460 aa16.77■□□□□ 0.28
APEX1-220ENST00000557592 NLRP1Q9C000 1473 aa16.77■□□□□ 0.28
APEX1-220ENST00000557592 ZNF142P52746 1687 aaPredicted RBP16.76■□□□□ 0.27
APEX1-220ENST00000557592 CEP170BQ9Y4F5 1589 aaPredicted RBP16.76■□□□□ 0.27
APEX1-220ENST00000557592 A2ML1A8K2U0 1454 aa16.74■□□□□ 0.27
APEX1-220ENST00000557592 PTPRTO14522 1441 aa16.74■□□□□ 0.27
APEX1-220ENST00000557592 UGGT1Q9NYU2 1555 aa16.73■□□□□ 0.27
APEX1-220ENST00000557592 TRPM2O94759 1503 aa16.72■□□□□ 0.27
APEX1-220ENST00000557592 PIK3C2BO00750 1634 aa16.72■□□□□ 0.27
APEX1-220ENST00000557592 SLC52A1Q9NWF4 448 aa16.72■□□□□ 0.27
APEX1-220ENST00000557592 IDI1Q13907 227 aa16.71■□□□□ 0.27
APEX1-220ENST00000557592 PLA2R1Q13018 1463 aa16.71■□□□□ 0.27
APEX1-220ENST00000557592 HSPA2P54652 639 aa16.7■□□□□ 0.26
APEX1-220ENST00000557592 STAG3Q9UJ98 1225 aa16.7■□□□□ 0.26
APEX1-220ENST00000557592 UBR1Q8IWV7 1749 aa16.69■□□□□ 0.26
APEX1-220ENST00000557592 CLTCL1P53675 1640 aa16.69■□□□□ 0.26
APEX1-220ENST00000557592 ADGRB3O60242 1522 aa16.67■□□□□ 0.26
APEX1-220ENST00000557592 CHGAP10645 457 aaKnown RBP16.67■□□□□ 0.26
APEX1-220ENST00000557592 KDM5AP29375 1690 aaKnown RBP16.66■□□□□ 0.26
APEX1-220ENST00000557592 MYO5BQ9ULV0 1848 aa16.66■□□□□ 0.26
APEX1-220ENST00000557592 THEMISQ8N1K5 641 aaPredicted RBP16.66■□□□□ 0.26
APEX1-220ENST00000557592 CCDC144AA2RUR9 1427 aa16.65■□□□□ 0.26
APEX1-220ENST00000557592 TMEM131LA2VDJ0 1609 aa16.65■□□□□ 0.26
APEX1-220ENST00000557592 KIF1BO60333 1816 aa16.65■□□□□ 0.26
APEX1-220ENST00000557592 DHX57Q6P158 1386 aaKnown RBP16.64■□□□□ 0.26
APEX1-220ENST00000557592 ANKRD30BQ9BXX2 1392 aa16.64■□□□□ 0.25
APEX1-220ENST00000557592 ZNF326Q5BKZ1 582 aaKnown RBP16.6■□□□□ 0.25
APEX1-220ENST00000557592 POLR1AO95602 1720 aaPredicted RBP16.59■□□□□ 0.25
APEX1-220ENST00000557592 TMEM2Q9UHN6 1383 aa16.59■□□□□ 0.25
APEX1-220ENST00000557592 SLIT1O75093 1534 aa16.59■□□□□ 0.25
APEX1-220ENST00000557592 STRCQ7RTU9 1775 aa16.59■□□□□ 0.25
APEX1-220ENST00000557592 ANKLE2Q86XL3 938 aa16.58■□□□□ 0.24
APEX1-220ENST00000557592 NCKAP5LQ9HCH0 1330 aa16.58■□□□□ 0.24
APEX1-220ENST00000557592 ARHGAP23Q9P227 1491 aa16.58■□□□□ 0.24
APEX1-220ENST00000557592 EID1Q9Y6B2 187 aa16.57■□□□□ 0.24
APEX1-220ENST00000557592 RIMS2Q9UQ26 1411 aa16.56■□□□□ 0.24
APEX1-220ENST00000557592 SCAF11Q99590 1463 aaKnown RBP16.55■□□□□ 0.24
APEX1-220ENST00000557592 LTKP29376 864 aa16.55■□□□□ 0.24
APEX1-220ENST00000557592 TXNDC2Q86VQ3 553 aa16.55■□□□□ 0.24
APEX1-220ENST00000557592 ZFYVE9O95405 1425 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms