RNA–Protein interactions for RNA: ENST00000556903.2

FDPSP3-201, Transcript of farnesyl diphosphate synthase pseudogene 3, humanhuman

BASIC

Gene FDPSP3, Length 1,013 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPSP3-201ENST00000556903 MBD5Q9P267 1494 aa11.63□□□□□ -0.55
FDPSP3-201ENST00000556903 ARHGEF5Q12774 1597 aa11.63□□□□□ -0.55
FDPSP3-201ENST00000556903 NPATQ14207 1427 aa11.63□□□□□ -0.55
FDPSP3-201ENST00000556903 ROCK1Q13464 1354 aa11.63□□□□□ -0.55
FDPSP3-201ENST00000556903 CCDC141Q6ZP82 1450 aa11.63□□□□□ -0.55
FDPSP3-201ENST00000556903 PTPRKQ15262 1439 aa11.62□□□□□ -0.55
FDPSP3-201ENST00000556903 SETD5Q9C0A6 1442 aa11.62□□□□□ -0.55
FDPSP3-201ENST00000556903 STRCQ7RTU9 1775 aa11.62□□□□□ -0.55
FDPSP3-201ENST00000556903 HRCP23327 699 aa11.62□□□□□ -0.55
FDPSP3-201ENST00000556903 CHIC2Q9UKJ5 165 aa11.62□□□□□ -0.55
FDPSP3-201ENST00000556903 DMRT2Q9Y5R5 561 aa11.62□□□□□ -0.55
FDPSP3-201ENST00000556903 SHANK2Q9UPX8 1470 aa11.62□□□□□ -0.55
FDPSP3-201ENST00000556903 ACIN1Q9UKV3 1341 aaKnown RBP11.61□□□□□ -0.55
FDPSP3-201ENST00000556903 ANKRD30AQ9BXX3 1397 aa11.61□□□□□ -0.55
FDPSP3-201ENST00000556903 HFM1A2PYH4 1435 aa11.6□□□□□ -0.55
FDPSP3-201ENST00000556903 FAM135AQ9P2D6 1515 aa11.6□□□□□ -0.55
FDPSP3-201ENST00000556903 CLTCQ00610 1675 aaKnown RBP11.59□□□□□ -0.55
FDPSP3-201ENST00000556903 ADGRL2O95490 1459 aa11.58□□□□□ -0.56
FDPSP3-201ENST00000556903 ZMYM3Q14202 1370 aa11.58□□□□□ -0.56
FDPSP3-201ENST00000556903 RRP7BPQ9NSQ0 103 aa11.58□□□□□ -0.56
FDPSP3-201ENST00000556903 PTPRTO14522 1441 aa11.58□□□□□ -0.56
FDPSP3-201ENST00000556903 ZNF142P52746 1687 aaPredicted RBP11.58□□□□□ -0.56
FDPSP3-201ENST00000556903 NAIPQ13075 1403 aa11.57□□□□□ -0.56
FDPSP3-201ENST00000556903 NCOA1Q15788 1441 aa11.57□□□□□ -0.56
FDPSP3-201ENST00000556903 DHX29Q7Z478 1369 aaKnown RBP11.56□□□□□ -0.56
FDPSP3-201ENST00000556903 RAB3GAP2Q9H2M9 1393 aa11.56□□□□□ -0.56
FDPSP3-201ENST00000556903 CERKQ8TCT0 537 aa11.56□□□□□ -0.56
FDPSP3-201ENST00000556903 MAST1Q9Y2H9 1570 aa11.55□□□□□ -0.56
FDPSP3-201ENST00000556903 MYO3AQ8NEV4 1616 aa11.55□□□□□ -0.56
FDPSP3-201ENST00000556903 CROCC2H7BZ55 1655 aa11.55□□□□□ -0.56
FDPSP3-201ENST00000556903 CCER1Q8TC90 406 aaPredicted RBP11.54□□□□□ -0.56
FDPSP3-201ENST00000556903 KIF15Q9NS87 1388 aa11.54□□□□□ -0.56
FDPSP3-201ENST00000556903 PLA2R1Q13018 1463 aa11.53□□□□□ -0.56
FDPSP3-201ENST00000556903 GGT6Q6P531 493 aa11.53□□□□□ -0.56
FDPSP3-201ENST00000556903 CEP170BQ9Y4F5 1589 aaPredicted RBP11.53□□□□□ -0.56
FDPSP3-201ENST00000556903 CAMSAP1Q5T5Y3 1602 aa11.53□□□□□ -0.56
FDPSP3-201ENST00000556903 KDM5DQ9BY66 1539 aa11.52□□□□□ -0.57
FDPSP3-201ENST00000556903 ANKRD50Q9ULJ7 1429 aa11.52□□□□□ -0.57
FDPSP3-201ENST00000556903 GCC2Q8IWJ2 1684 aa11.51□□□□□ -0.57
FDPSP3-201ENST00000556903 IQSEC2Q5JU85 1478 aa11.51□□□□□ -0.57
FDPSP3-201ENST00000556903 PZPP20742 1482 aa11.5□□□□□ -0.57
FDPSP3-201ENST00000556903 RNF17Q9BXT8 1623 aaKnown RBP11.49□□□□□ -0.57
FDPSP3-201ENST00000556903 EIF2AK4Q9P2K8 1649 aaKnown RBP11.49□□□□□ -0.57
FDPSP3-201ENST00000556903 A2ML1A8K2U0 1454 aa11.49□□□□□ -0.57
FDPSP3-201ENST00000556903 LTBP4Q8N2S1 1624 aa11.49□□□□□ -0.57
FDPSP3-201ENST00000556903 ZC3H13Q5T200 1668 aaKnown RBP11.49□□□□□ -0.57
FDPSP3-201ENST00000556903 KIF3BO15066 747 aa11.48□□□□□ -0.57
FDPSP3-201ENST00000556903 ZEB1P37275 1124 aaPredicted RBP11.48□□□□□ -0.57
FDPSP3-201ENST00000556903 PKD2Q13563 968 aa11.48□□□□□ -0.57
FDPSP3-201ENST00000556903 TRIM52Q96A61 297 aa11.48□□□□□ -0.57
FDPSP3-201ENST00000556903 CLSPNQ9HAW4 1339 aa11.48□□□□□ -0.57
FDPSP3-201ENST00000556903 DUOX2Q9NRD8 1548 aa11.48□□□□□ -0.57
FDPSP3-201ENST00000556903 ERBINQ96RT1 1412 aa11.47□□□□□ -0.57
FDPSP3-201ENST00000556903 DHX57Q6P158 1386 aaKnown RBP11.46□□□□□ -0.57
FDPSP3-201ENST00000556903 WASHC2CQ9Y4E1 1318 aa11.46□□□□□ -0.57
FDPSP3-201ENST00000556903 NLRP1Q9C000 1473 aa11.45□□□□□ -0.58
FDPSP3-201ENST00000556903 TNRQ92752 1358 aa11.45□□□□□ -0.58
FDPSP3-201ENST00000556903 POLR1AO95602 1720 aaPredicted RBP11.44□□□□□ -0.58
FDPSP3-201ENST00000556903 ABCC3O15438 1527 aa11.43□□□□□ -0.58
FDPSP3-201ENST00000556903 MROH1Q8NDA8 1641 aa11.42□□□□□ -0.58
FDPSP3-201ENST00000556903 NCKAP5LQ9HCH0 1330 aa11.42□□□□□ -0.58
FDPSP3-201ENST00000556903 NUP155O75694 1391 aa11.41□□□□□ -0.58
FDPSP3-201ENST00000556903 SPATA31D1Q6ZQQ2 1576 aa11.41□□□□□ -0.58
FDPSP3-201ENST00000556903 MPHOSPH9Q99550 1183 aa11.41□□□□□ -0.58
FDPSP3-201ENST00000556903 SLC4A1APQ9BWU0 796 aaKnown RBP11.41□□□□□ -0.58
FDPSP3-201ENST00000556903 PRDM15P57071 1507 aaPredicted RBP11.4□□□□□ -0.58
FDPSP3-201ENST00000556903 DEPDC5O75140 1603 aa11.4□□□□□ -0.58
FDPSP3-201ENST00000556903 FBXO31Q5XUX0 539 aaPredicted RBP11.4□□□□□ -0.58
FDPSP3-201ENST00000556903 NEURL4Q96JN8 1562 aa11.4□□□□□ -0.58
FDPSP3-201ENST00000556903 UGGT1Q9NYU2 1555 aa11.4□□□□□ -0.58
FDPSP3-201ENST00000556903 KANK1Q14678 1352 aa11.4□□□□□ -0.59
FDPSP3-201ENST00000556903 THEMISQ8N1K5 641 aaPredicted RBP11.39□□□□□ -0.59
FDPSP3-201ENST00000556903 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.39□□□□□ -0.59
FDPSP3-201ENST00000556903 ERVK-7P63135 1459 aa11.38□□□□□ -0.59
FDPSP3-201ENST00000556903 CEP152O94986 1710 aa11.38□□□□□ -0.59
FDPSP3-201ENST00000556903 ARHGAP31Q2M1Z3 1444 aa11.38□□□□□ -0.59
FDPSP3-201ENST00000556903 MED14O60244 1454 aa11.38□□□□□ -0.59
FDPSP3-201ENST00000556903 ZNF335Q9H4Z2 1342 aaPredicted RBP11.37□□□□□ -0.59
FDPSP3-201ENST00000556903 CPS1P31327 1500 aa11.37□□□□□ -0.59
FDPSP3-201ENST00000556903 UNC13BO14795 1591 aa11.37□□□□□ -0.59
FDPSP3-201ENST00000556903 ANKLE2Q86XL3 938 aa11.36□□□□□ -0.59
FDPSP3-201ENST00000556903 CFAP65Q6ZU64 1925 aaKnown RBP11.36□□□□□ -0.59
FDPSP3-201ENST00000556903 IQGAP1P46940 1657 aa11.34□□□□□ -0.59
FDPSP3-201ENST00000556903 UBR1Q8IWV7 1749 aa11.34□□□□□ -0.59
FDPSP3-201ENST00000556903 LMTK2Q8IWU2 1503 aa11.34□□□□□ -0.59
FDPSP3-201ENST00000556903 KDM5AP29375 1690 aaKnown RBP11.33□□□□□ -0.6
FDPSP3-201ENST00000556903 VWDEQ8N2E2 1590 aa11.33□□□□□ -0.6
FDPSP3-201ENST00000556903 NPHP4O75161 1426 aaPredicted RBP11.33□□□□□ -0.6
FDPSP3-201ENST00000556903 TIMELESSQ9UNS1 1208 aa11.32□□□□□ -0.6
FDPSP3-201ENST00000556903 IQGAP3Q86VI3 1631 aa11.31□□□□□ -0.6
FDPSP3-201ENST00000556903 SLIT1O75093 1534 aa11.31□□□□□ -0.6
FDPSP3-201ENST00000556903 ARHGAP23Q9P227 1491 aa11.31□□□□□ -0.6
FDPSP3-201ENST00000556903 ANKRD30BQ9BXX2 1392 aa11.3□□□□□ -0.6
FDPSP3-201ENST00000556903 SYNMO15061 1565 aa11.29□□□□□ -0.6
FDPSP3-201ENST00000556903 UBAP1LF5GYI3 381 aa11.29□□□□□ -0.6
FDPSP3-201ENST00000556903 NEUROD1Q13562 356 aa11.29□□□□□ -0.6
FDPSP3-201ENST00000556903 SCAF11Q99590 1463 aaKnown RBP11.29□□□□□ -0.6
FDPSP3-201ENST00000556903 EFCAB6Q5THR3 1501 aa11.29□□□□□ -0.6
FDPSP3-201ENST00000556903 PPP4R3CPQ6ZMV5 832 aa11.28□□□□□ -0.6
FDPSP3-201ENST00000556903 SIN3AQ96ST3 1273 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms