RNA–Protein interactions for RNA: ENST00000556897.5

HNRNPC-227, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HNRNPC, Length 1,252 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-227ENST00000556897 EHBP1L1Q8N3D4 1523 aa14.57□□□□□ -0.08
HNRNPC-227ENST00000556897 KIF3BO15066 747 aa14.57□□□□□ -0.08
HNRNPC-227ENST00000556897 TNRQ92752 1358 aa14.57□□□□□ -0.08
HNRNPC-227ENST00000556897 SCAF1Q9H7N4 1312 aaKnown RBP14.56□□□□□ -0.08
HNRNPC-227ENST00000556897 CEP162Q5TB80 1403 aa14.56□□□□□ -0.08
HNRNPC-227ENST00000556897 PIP4K2BP78356 416 aa14.55□□□□□ -0.08
HNRNPC-227ENST00000556897 HSPA1LP34931 641 aa14.54□□□□□ -0.08
HNRNPC-227ENST00000556897 WASHC2CQ9Y4E1 1318 aa14.54□□□□□ -0.08
HNRNPC-227ENST00000556897 PZPP20742 1482 aa14.54□□□□□ -0.08
HNRNPC-227ENST00000556897 NEURL4Q96JN8 1562 aa14.54□□□□□ -0.08
HNRNPC-227ENST00000556897 POLR1AO95602 1720 aaPredicted RBP14.53□□□□□ -0.08
HNRNPC-227ENST00000556897 KDM5DQ9BY66 1539 aa14.53□□□□□ -0.08
HNRNPC-227ENST00000556897 CCDC141Q6ZP82 1450 aa14.53□□□□□ -0.08
HNRNPC-227ENST00000556897 CPS1P31327 1500 aa14.52□□□□□ -0.08
HNRNPC-227ENST00000556897 SHANK2Q9UPX8 1470 aa14.52□□□□□ -0.08
HNRNPC-227ENST00000556897 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.52□□□□□ -0.08
HNRNPC-227ENST00000556897 TOM1O60784 492 aa14.52□□□□□ -0.09
HNRNPC-227ENST00000556897 CAMSAP2Q08AD1 1489 aa14.51□□□□□ -0.09
HNRNPC-227ENST00000556897 ANKLE2Q86XL3 938 aa14.51□□□□□ -0.09
HNRNPC-227ENST00000556897 NCOA2Q15596 1464 aa14.5□□□□□ -0.09
HNRNPC-227ENST00000556897 RSPH4AQ5TD94 716 aa14.5□□□□□ -0.09
HNRNPC-227ENST00000556897 FAM135AQ9P2D6 1515 aa14.5□□□□□ -0.09
HNRNPC-227ENST00000556897 MIA2Q96PC5 1412 aa14.49□□□□□ -0.09
HNRNPC-227ENST00000556897 THEMISQ8N1K5 641 aaPredicted RBP14.49□□□□□ -0.09
HNRNPC-227ENST00000556897 NLRP1Q9C000 1473 aa14.48□□□□□ -0.09
HNRNPC-227ENST00000556897 MED1Q15648 1581 aaPredicted RBP14.47□□□□□ -0.09
HNRNPC-227ENST00000556897 VWDEQ8N2E2 1590 aa14.47□□□□□ -0.09
HNRNPC-227ENST00000556897 UGGT1Q9NYU2 1555 aa14.47□□□□□ -0.09
HNRNPC-227ENST00000556897 FOXD1Q16676 465 aa14.47□□□□□ -0.09
HNRNPC-227ENST00000556897 NPHP4O75161 1426 aaPredicted RBP14.47□□□□□ -0.09
HNRNPC-227ENST00000556897 TSPY4P0CV99 314 aa14.46□□□□□ -0.09
HNRNPC-227ENST00000556897 TSPY10P0CW01 314 aa14.46□□□□□ -0.09
HNRNPC-227ENST00000556897 MED14O60244 1454 aa14.45□□□□□ -0.1
HNRNPC-227ENST00000556897 ARHGEF5Q12774 1597 aa14.44□□□□□ -0.1
HNRNPC-227ENST00000556897 DEPDC5O75140 1603 aa14.44□□□□□ -0.1
HNRNPC-227ENST00000556897 ALKQ9UM73 1620 aa14.43□□□□□ -0.1
HNRNPC-227ENST00000556897 IQGAP1P46940 1657 aa14.42□□□□□ -0.1
HNRNPC-227ENST00000556897 ABCC3O15438 1527 aa14.41□□□□□ -0.1
HNRNPC-227ENST00000556897 RNF17Q9BXT8 1623 aaKnown RBP14.41□□□□□ -0.1
HNRNPC-227ENST00000556897 ERVK-7P63135 1459 aa14.39□□□□□ -0.11
HNRNPC-227ENST00000556897 LRRC7Q96NW7 1537 aa14.39□□□□□ -0.11
HNRNPC-227ENST00000556897 STRCP1A6NGW2 1772 aa14.39□□□□□ -0.11
HNRNPC-227ENST00000556897 ZC3H13Q5T200 1668 aaKnown RBP14.38□□□□□ -0.11
HNRNPC-227ENST00000556897 LRRC9Q6ZRR7 1453 aa14.38□□□□□ -0.11
HNRNPC-227ENST00000556897 MAST1Q9Y2H9 1570 aa14.37□□□□□ -0.11
HNRNPC-227ENST00000556897 MROH1Q8NDA8 1641 aa14.36□□□□□ -0.11
HNRNPC-227ENST00000556897 CFAP65Q6ZU64 1925 aaKnown RBP14.35□□□□□ -0.11
HNRNPC-227ENST00000556897 EIF2AK4Q9P2K8 1649 aaKnown RBP14.35□□□□□ -0.11
HNRNPC-227ENST00000556897 SYNMO15061 1565 aa14.34□□□□□ -0.11
HNRNPC-227ENST00000556897 SCAF11Q99590 1463 aaKnown RBP14.34□□□□□ -0.11
HNRNPC-227ENST00000556897 KANK4Q5T7N3 995 aaPredicted RBP14.34□□□□□ -0.11
HNRNPC-227ENST00000556897 VPS8Q8N3P4 1428 aa14.33□□□□□ -0.11
HNRNPC-227ENST00000556897 CEP152O94986 1710 aa14.33□□□□□ -0.12
HNRNPC-227ENST00000556897 UBR1Q8IWV7 1749 aa14.33□□□□□ -0.12
HNRNPC-227ENST00000556897 LTKP29376 864 aa14.33□□□□□ -0.12
HNRNPC-227ENST00000556897 TXNDC2Q86VQ3 553 aa14.33□□□□□ -0.12
HNRNPC-227ENST00000556897 MYOM3Q5VTT5 1437 aa14.32□□□□□ -0.12
HNRNPC-227ENST00000556897 DUOX2Q9NRD8 1548 aa14.31□□□□□ -0.12
HNRNPC-227ENST00000556897 ARHGAP23Q9P227 1491 aa14.3□□□□□ -0.12
HNRNPC-227ENST00000556897 SLIT1O75093 1534 aa14.3□□□□□ -0.12
HNRNPC-227ENST00000556897 KIF15Q9NS87 1388 aa14.29□□□□□ -0.12
HNRNPC-227ENST00000556897 PRDM15P57071 1507 aaPredicted RBP14.28□□□□□ -0.12
HNRNPC-227ENST00000556897 ARHGAP31Q2M1Z3 1444 aa14.28□□□□□ -0.12
HNRNPC-227ENST00000556897 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.28□□□□□ -0.122e-26■■□□□ 12.1
HNRNPC-227ENST00000556897 RRP7BPQ9NSQ0 103 aa14.28□□□□□ -0.12
HNRNPC-227ENST00000556897 EID1Q9Y6B2 187 aa14.28□□□□□ -0.12
HNRNPC-227ENST00000556897 LOC105371045A0A1W2PR82 267 aa14.27□□□□□ -0.13
HNRNPC-227ENST00000556897 RGS17Q9UGC6 210 aaPredicted RBP14.27□□□□□ -0.13
HNRNPC-227ENST00000556897 MAP3K1Q13233 1512 aa14.26□□□□□ -0.13
HNRNPC-227ENST00000556897 ERBINQ96RT1 1412 aa14.26□□□□□ -0.13
HNRNPC-227ENST00000556897 TMEM2Q9UHN6 1383 aa14.26□□□□□ -0.13
HNRNPC-227ENST00000556897 XIRP1Q702N8 1843 aaKnown RBP14.26□□□□□ -0.13
HNRNPC-227ENST00000556897 ABCC5O15440 1437 aa14.25□□□□□ -0.13
HNRNPC-227ENST00000556897 STAG3Q9UJ98 1225 aa14.25□□□□□ -0.13
HNRNPC-227ENST00000556897 PIK3C2BO00750 1634 aa14.25□□□□□ -0.13
HNRNPC-227ENST00000556897 TMEM94Q12767 1356 aa14.23□□□□□ -0.13
HNRNPC-227ENST00000556897 IDI1Q13907 227 aa14.22□□□□□ -0.13
HNRNPC-227ENST00000556897 CROCC2H7BZ55 1655 aa14.22□□□□□ -0.13
HNRNPC-227ENST00000556897 FAM135BQ49AJ0 1406 aa14.22□□□□□ -0.13
HNRNPC-227ENST00000556897 KANK1Q14678 1352 aa14.22□□□□□ -0.13
HNRNPC-227ENST00000556897 EFCAB6Q5THR3 1501 aa14.21□□□□□ -0.13
HNRNPC-227ENST00000556897 KCNA6P17658 529 aa14.21□□□□□ -0.13
HNRNPC-227ENST00000556897 RBM33Q96EV2 1170 aaKnown RBP14.21□□□□□ -0.13
HNRNPC-227ENST00000556897 SLC26A8Q96RN1 970 aa14.21□□□□□ -0.13
HNRNPC-227ENST00000556897 DAPK1P53355 1430 aa14.21□□□□□ -0.13
HNRNPC-227ENST00000556897 PTPN23Q9H3S7 1636 aa14.2□□□□□ -0.14
HNRNPC-227ENST00000556897 CHIC2Q9UKJ5 165 aa14.19□□□□□ -0.14
HNRNPC-227ENST00000556897 PROSER2Q86WR7 435 aaPredicted RBP14.18□□□□□ -0.14
HNRNPC-227ENST00000556897 TET3O43151 1660 aa14.17□□□□□ -0.14
HNRNPC-227ENST00000556897 KDM5AP29375 1690 aaKnown RBP14.17□□□□□ -0.14
HNRNPC-227ENST00000556897 LMTK2Q8IWU2 1503 aa14.17□□□□□ -0.14
HNRNPC-227ENST00000556897 POTEAQ6S8J7 498 aa14.17□□□□□ -0.14
HNRNPC-227ENST00000556897 ANKRD30AQ9BXX3 1397 aa14.17□□□□□ -0.14
HNRNPC-227ENST00000556897 ROBO1Q9Y6N7 1651 aa14.17□□□□□ -0.14
HNRNPC-227ENST00000556897 APLP2Q06481 763 aa14.16□□□□□ -0.14
HNRNPC-227ENST00000556897 NOS1P29475 1434 aa14.15□□□□□ -0.14
HNRNPC-227ENST00000556897 FGD6Q6ZV73 1430 aa14.15□□□□□ -0.14
HNRNPC-227ENST00000556897 BCANQ96GW7 911 aa14.15□□□□□ -0.14
HNRNPC-227ENST00000556897 ADGRB3O60242 1522 aa14.14□□□□□ -0.15
HNRNPC-227ENST00000556897 NKTRP30414 1462 aaKnown RBP14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms