RNA–Protein interactions for RNA: ENST00000556707.5

SDR39U1-221, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 1,196 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-221ENST00000556707 MROH2AA6NES4 1674 aa37.5■■■■□ 3.59
SDR39U1-221ENST00000556707 ERBINQ96RT1 1412 aa37.5■■■■□ 3.59
SDR39U1-221ENST00000556707 CLTCQ00610 1675 aaKnown RBP37.5■■■■□ 3.59
SDR39U1-221ENST00000556707 C3P01024 1663 aa37.48■■■■□ 3.59
SDR39U1-221ENST00000556707 ITGAEP38570 1179 aa37.46■■■■□ 3.59
SDR39U1-221ENST00000556707 PLPPR3Q6T4P5 718 aa37.46■■■■□ 3.59
SDR39U1-221ENST00000556707 ROCK1Q13464 1354 aa37.44■■■■□ 3.58
SDR39U1-221ENST00000556707 FAM135AQ9P2D6 1515 aa37.44■■■■□ 3.58
SDR39U1-221ENST00000556707 CEBPAP49715 358 aaPredicted RBP37.43■■■■□ 3.58
SDR39U1-221ENST00000556707 SETD1BQ9UPS6 1966 aaKnown RBP37.42■■■■□ 3.58
SDR39U1-221ENST00000556707 MROH1Q8NDA8 1641 aa37.4■■■■□ 3.58
SDR39U1-221ENST00000556707 KDM5DQ9BY66 1539 aa37.4■■■■□ 3.58
SDR39U1-221ENST00000556707 ZMYM3Q14202 1370 aa37.39■■■■□ 3.58
SDR39U1-221ENST00000556707 DEPDC5O75140 1603 aa37.36■■■■□ 3.57
SDR39U1-221ENST00000556707 ANKRD50Q9ULJ7 1429 aa37.36■■■■□ 3.57
SDR39U1-221ENST00000556707 WASHC2CQ9Y4E1 1318 aa37.35■■■■□ 3.57
SDR39U1-221ENST00000556707 ZC3H13Q5T200 1668 aaKnown RBP37.33■■■■□ 3.57
SDR39U1-221ENST00000556707 PRDM15P57071 1507 aaPredicted RBP37.32■■■■□ 3.57
SDR39U1-221ENST00000556707 ABCC3O15438 1527 aa37.3■■■■□ 3.56
SDR39U1-221ENST00000556707 CEP152O94986 1710 aa37.28■■■■□ 3.56
SDR39U1-221ENST00000556707 PREX1Q8TCU6 1659 aa37.26■■■■□ 3.56
SDR39U1-221ENST00000556707 NPATQ14207 1427 aa37.25■■■■□ 3.55
SDR39U1-221ENST00000556707 GRWD1Q9BQ67 446 aaKnown RBP eCLIP37.23■■■■□ 3.556e-6■□□□□ 8.3
SDR39U1-221ENST00000556707 LMTK3Q96Q04 1460 aa37.21■■■■□ 3.55
SDR39U1-221ENST00000556707 KANK1Q14678 1352 aa37.21■■■■□ 3.55
SDR39U1-221ENST00000556707 VWDEQ8N2E2 1590 aa37.2■■■■□ 3.55
SDR39U1-221ENST00000556707 PZPP20742 1482 aa37.2■■■■□ 3.54
SDR39U1-221ENST00000556707 CAMSAP1Q5T5Y3 1602 aa37.19■■■■□ 3.54
SDR39U1-221ENST00000556707 GCC2Q8IWJ2 1684 aa37.16■■■■□ 3.54
SDR39U1-221ENST00000556707 UNC13BO14795 1591 aa37.16■■■■□ 3.54
SDR39U1-221ENST00000556707 CFAP65Q6ZU64 1925 aaKnown RBP37.16■■■■□ 3.54
SDR39U1-221ENST00000556707 UHRF1BP1Q6BDS2 1440 aa37.14■■■■□ 3.54
SDR39U1-221ENST00000556707 NAIPQ13075 1403 aa37.13■■■■□ 3.53
SDR39U1-221ENST00000556707 LMTK2Q8IWU2 1503 aa37.12■■■■□ 3.53
SDR39U1-221ENST00000556707 FBXO31Q5XUX0 539 aaPredicted RBP37.1■■■■□ 3.53
SDR39U1-221ENST00000556707 HFM1A2PYH4 1435 aa37.1■■■■□ 3.53
SDR39U1-221ENST00000556707 ARHGAP31Q2M1Z3 1444 aa37.08■■■■□ 3.53
SDR39U1-221ENST00000556707 MYO3AQ8NEV4 1616 aa37.06■■■■□ 3.52
SDR39U1-221ENST00000556707 TNRQ92752 1358 aa37.04■■■■□ 3.52
SDR39U1-221ENST00000556707 SPATA31D1Q6ZQQ2 1576 aa37.02■■■■□ 3.52
SDR39U1-221ENST00000556707 EFCAB6Q5THR3 1501 aa37.01■■■■□ 3.52
SDR39U1-221ENST00000556707 IQGAP3Q86VI3 1631 aa37.01■■■■□ 3.52
SDR39U1-221ENST00000556707 HSPA2P54652 639 aa37.01■■■■□ 3.52
SDR39U1-221ENST00000556707 TET3O43151 1660 aa37.01■■■■□ 3.52
SDR39U1-221ENST00000556707 ZNF142P52746 1687 aaPredicted RBP37.01■■■■□ 3.52
SDR39U1-221ENST00000556707 ERVK-7P63135 1459 aa37.01■■■■□ 3.51
SDR39U1-221ENST00000556707 NUP155O75694 1391 aa36.97■■■■□ 3.51
SDR39U1-221ENST00000556707 CEP170BQ9Y4F5 1589 aaPredicted RBP36.96■■■■□ 3.51
SDR39U1-221ENST00000556707 A2ML1A8K2U0 1454 aa36.92■■■■□ 3.5
SDR39U1-221ENST00000556707 RPRD2Q5VT52 1461 aaKnown RBP36.9■■■■□ 3.5
SDR39U1-221ENST00000556707 NLRP1Q9C000 1473 aa36.9■■■■□ 3.5
SDR39U1-221ENST00000556707 E9PCH4 1651 aa36.86■■■■□ 3.49
SDR39U1-221ENST00000556707 NOS1P29475 1434 aa36.83■■■■□ 3.49
SDR39U1-221ENST00000556707 STRCQ7RTU9 1775 aa36.81■■■■□ 3.48
SDR39U1-221ENST00000556707 SYNMO15061 1565 aa36.8■■■■□ 3.48
SDR39U1-221ENST00000556707 SETD5Q9C0A6 1442 aa36.79■■■■□ 3.48
SDR39U1-221ENST00000556707 TRIM52Q96A61 297 aa36.78■■■■□ 3.48
SDR39U1-221ENST00000556707 UGGT1Q9NYU2 1555 aa36.78■■■■□ 3.48
SDR39U1-221ENST00000556707 PLA2R1Q13018 1463 aa36.74■■■■□ 3.47
SDR39U1-221ENST00000556707 UBR1Q8IWV7 1749 aa36.73■■■■□ 3.47
SDR39U1-221ENST00000556707 PIK3C2BO00750 1634 aa36.71■■■■□ 3.47
SDR39U1-221ENST00000556707 THEMISQ8N1K5 641 aaPredicted RBP36.71■■■■□ 3.47
SDR39U1-221ENST00000556707 ACIN1Q9UKV3 1341 aaKnown RBP36.68■■■■□ 3.46
SDR39U1-221ENST00000556707 IDI1Q13907 227 aa36.68■■■■□ 3.46
SDR39U1-221ENST00000556707 SLC52A1Q9NWF4 448 aa36.68■■■■□ 3.46
SDR39U1-221ENST00000556707 KDM5AP29375 1690 aaKnown RBP36.67■■■■□ 3.46
SDR39U1-221ENST00000556707 SPHKAPQ2M3C7 1700 aa36.66■■■■□ 3.46
SDR39U1-221ENST00000556707 RAB3GAP2Q9H2M9 1393 aa36.66■■■■□ 3.46
SDR39U1-221ENST00000556707 SLC4A1APQ9BWU0 796 aaKnown RBP36.64■■■■□ 3.46
SDR39U1-221ENST00000556707 PKD2Q13563 968 aa36.63■■■■□ 3.45
SDR39U1-221ENST00000556707 DMRT2Q9Y5R5 561 aa36.62■■■■□ 3.45
SDR39U1-221ENST00000556707 POLR1AO95602 1720 aaPredicted RBP36.62■■■■□ 3.45
SDR39U1-221ENST00000556707 NCKAP5LQ9HCH0 1330 aa36.6■■■■□ 3.45
SDR39U1-221ENST00000556707 PTPRTO14522 1441 aa36.59■■■■□ 3.45
SDR39U1-221ENST00000556707 STAG3Q9UJ98 1225 aa36.58■■■■□ 3.45
SDR39U1-221ENST00000556707 ADGRB3O60242 1522 aa36.58■■■■□ 3.45
SDR39U1-221ENST00000556707 MYO5BQ9ULV0 1848 aa36.56■■■■□ 3.44
SDR39U1-221ENST00000556707 ANKLE2Q86XL3 938 aa36.55■■■■□ 3.44
SDR39U1-221ENST00000556707 SLIT1O75093 1534 aa36.54■■■■□ 3.44
SDR39U1-221ENST00000556707 MPHOSPH9Q99550 1183 aa36.53■■■■□ 3.44
SDR39U1-221ENST00000556707 ARHGAP23Q9P227 1491 aa36.52■■■■□ 3.44
SDR39U1-221ENST00000556707 HRCP23327 699 aa36.52■■■■□ 3.44
SDR39U1-221ENST00000556707 TMEM131LA2VDJ0 1609 aa36.52■■■■□ 3.44
SDR39U1-221ENST00000556707 TRPM2O94759 1503 aa36.51■■■■□ 3.44
SDR39U1-221ENST00000556707 NEURL4Q96JN8 1562 aa36.51■■■■□ 3.44
SDR39U1-221ENST00000556707 TMEM2Q9UHN6 1383 aa36.48■■■■□ 3.43
SDR39U1-221ENST00000556707 CLTCL1P53675 1640 aa36.45■■■■□ 3.42
SDR39U1-221ENST00000556707 MED14O60244 1454 aa36.44■■■■□ 3.42
SDR39U1-221ENST00000556707 SCAF11Q99590 1463 aaKnown RBP36.43■■■■□ 3.42
SDR39U1-221ENST00000556707 CHGAP10645 457 aaKnown RBP36.42■■■■□ 3.42
SDR39U1-221ENST00000556707 FOXD1Q16676 465 aa36.42■■■■□ 3.42
SDR39U1-221ENST00000556707 LTKP29376 864 aa36.41■■■■□ 3.42
SDR39U1-221ENST00000556707 TXNDC2Q86VQ3 553 aa36.41■■■■□ 3.42
SDR39U1-221ENST00000556707 EID1Q9Y6B2 187 aa36.41■■■■□ 3.42
SDR39U1-221ENST00000556707 TRIM26Q12899 539 aaPredicted RBP36.4■■■■□ 3.42
SDR39U1-221ENST00000556707 KIF1BO60333 1816 aa36.4■■■■□ 3.42
SDR39U1-221ENST00000556707 NPHP4O75161 1426 aaPredicted RBP36.4■■■■□ 3.42
SDR39U1-221ENST00000556707 IQGAP1P46940 1657 aa36.39■■■■□ 3.42
SDR39U1-221ENST00000556707 ZFYVE9O95405 1425 aa36.34■■■■□ 3.41
SDR39U1-221ENST00000556707 RIMS2Q9UQ26 1411 aa36.33■■■■□ 3.41
Retrieved 100 of 20,778 RNA–protein pairs in 95.2 ms