RNA–Protein interactions for RNA: ENST00000556533.5

PSEN1-217, Transcript of presenilin 1, humanhuman

TSL 5

Gene PSEN1, Length 550 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-217ENST00000556533 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26■■□□□ 1.75
PSEN1-217ENST00000556533 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26■■□□□ 1.752e-7■□□□□ 10.6
PSEN1-217ENST00000556533 RRBP1Q9P2E9 1410 aaKnown RBP25.98■■□□□ 1.75
PSEN1-217ENST00000556533 ADGRL2O95490 1459 aa25.96■■□□□ 1.75
PSEN1-217ENST00000556533 ERBINQ96RT1 1412 aa25.95■■□□□ 1.74
PSEN1-217ENST00000556533 CLTCQ00610 1675 aaKnown RBP25.93■■□□□ 1.74
PSEN1-217ENST00000556533 ROCK1Q13464 1354 aa25.9■■□□□ 1.74
PSEN1-217ENST00000556533 C3P01024 1663 aa25.9■■□□□ 1.74
PSEN1-217ENST00000556533 ANKRD50Q9ULJ7 1429 aa25.89■■□□□ 1.74
PSEN1-217ENST00000556533 EIF2AK4Q9P2K8 1649 aaKnown RBP25.89■■□□□ 1.74
PSEN1-217ENST00000556533 HSPA2P54652 639 aa25.89■■□□□ 1.74
PSEN1-217ENST00000556533 FBXO31Q5XUX0 539 aaPredicted RBP25.88■■□□□ 1.73
PSEN1-217ENST00000556533 KDM5DQ9BY66 1539 aa25.88■■□□□ 1.73
PSEN1-217ENST00000556533 KANK1Q14678 1352 aa25.86■■□□□ 1.73
PSEN1-217ENST00000556533 RNF17Q9BXT8 1623 aaKnown RBP25.86■■□□□ 1.73
PSEN1-217ENST00000556533 MROH2AA6NES4 1674 aa25.84■■□□□ 1.73
PSEN1-217ENST00000556533 LMTK3Q96Q04 1460 aa25.84■■□□□ 1.73
PSEN1-217ENST00000556533 UHRF1BP1Q6BDS2 1440 aa25.82■■□□□ 1.72
PSEN1-217ENST00000556533 ABCC3O15438 1527 aa25.82■■□□□ 1.72
PSEN1-217ENST00000556533 NPATQ14207 1427 aa25.81■■□□□ 1.72
PSEN1-217ENST00000556533 MROH1Q8NDA8 1641 aa25.81■■□□□ 1.72
PSEN1-217ENST00000556533 FAM135AQ9P2D6 1515 aa25.8■■□□□ 1.72
PSEN1-217ENST00000556533 PZPP20742 1482 aa25.77■■□□□ 1.72
PSEN1-217ENST00000556533 PRDM15P57071 1507 aaPredicted RBP25.75■■□□□ 1.71
PSEN1-217ENST00000556533 TNRQ92752 1358 aa25.75■■□□□ 1.71
PSEN1-217ENST00000556533 PREX1Q8TCU6 1659 aa25.74■■□□□ 1.71
PSEN1-217ENST00000556533 DEPDC5O75140 1603 aa25.72■■□□□ 1.71
PSEN1-217ENST00000556533 ZC3H13Q5T200 1668 aaKnown RBP25.71■■□□□ 1.71
PSEN1-217ENST00000556533 CEP152O94986 1710 aa25.71■■□□□ 1.71
PSEN1-217ENST00000556533 SETD1BQ9UPS6 1966 aaKnown RBP25.7■■□□□ 1.7
PSEN1-217ENST00000556533 NUP155O75694 1391 aa25.69■■□□□ 1.7
PSEN1-217ENST00000556533 NAIPQ13075 1403 aa25.69■■□□□ 1.7
PSEN1-217ENST00000556533 CAMSAP1Q5T5Y3 1602 aa25.67■■□□□ 1.7
PSEN1-217ENST00000556533 ARHGAP31Q2M1Z3 1444 aa25.65■■□□□ 1.7
PSEN1-217ENST00000556533 ERVK-7P63135 1459 aa25.65■■□□□ 1.7
PSEN1-217ENST00000556533 VWDEQ8N2E2 1590 aa25.65■■□□□ 1.7
PSEN1-217ENST00000556533 TRIM52Q96A61 297 aa25.64■■□□□ 1.7
PSEN1-217ENST00000556533 HFM1A2PYH4 1435 aa25.63■■□□□ 1.69
PSEN1-217ENST00000556533 LMTK2Q8IWU2 1503 aa25.63■■□□□ 1.69
PSEN1-217ENST00000556533 MYO3AQ8NEV4 1616 aa25.63■■□□□ 1.69
PSEN1-217ENST00000556533 UNC13BO14795 1591 aa25.61■■□□□ 1.69
PSEN1-217ENST00000556533 A2ML1A8K2U0 1454 aa25.6■■□□□ 1.69
PSEN1-217ENST00000556533 CEP170BQ9Y4F5 1589 aaPredicted RBP25.6■■□□□ 1.69
PSEN1-217ENST00000556533 SPATA31D1Q6ZQQ2 1576 aa25.59■■□□□ 1.69
PSEN1-217ENST00000556533 NCKAP5LQ9HCH0 1330 aa25.58■■□□□ 1.69
PSEN1-217ENST00000556533 THEMISQ8N1K5 641 aaPredicted RBP25.57■■□□□ 1.68
PSEN1-217ENST00000556533 NLRP1Q9C000 1473 aa25.57■■□□□ 1.68
PSEN1-217ENST00000556533 EFCAB6Q5THR3 1501 aa25.57■■□□□ 1.68
PSEN1-217ENST00000556533 STAG3Q9UJ98 1225 aa25.55■■□□□ 1.68
PSEN1-217ENST00000556533 DMRT2Q9Y5R5 561 aa25.55■■□□□ 1.68
PSEN1-217ENST00000556533 CFAP65Q6ZU64 1925 aaKnown RBP25.55■■□□□ 1.68
PSEN1-217ENST00000556533 GCC2Q8IWJ2 1684 aa25.53■■□□□ 1.68
PSEN1-217ENST00000556533 IDI1Q13907 227 aa25.53■■□□□ 1.68
PSEN1-217ENST00000556533 UGGT1Q9NYU2 1555 aa25.51■■□□□ 1.67
PSEN1-217ENST00000556533 IQGAP3Q86VI3 1631 aa25.51■■□□□ 1.67
PSEN1-217ENST00000556533 TET3O43151 1660 aa25.51■■□□□ 1.67
PSEN1-217ENST00000556533 ZNF142P52746 1687 aaPredicted RBP25.5■■□□□ 1.67
PSEN1-217ENST00000556533 RPRD2Q5VT52 1461 aaKnown RBP25.5■■□□□ 1.67
PSEN1-217ENST00000556533 NOS1P29475 1434 aa25.49■■□□□ 1.67
PSEN1-217ENST00000556533 PKD2Q13563 968 aa25.49■■□□□ 1.67
PSEN1-217ENST00000556533 SLC52A1Q9NWF4 448 aa25.49■■□□□ 1.67
PSEN1-217ENST00000556533 SETD5Q9C0A6 1442 aa25.48■■□□□ 1.67
PSEN1-217ENST00000556533 ANKLE2Q86XL3 938 aa25.48■■□□□ 1.67
PSEN1-217ENST00000556533 SLC4A1APQ9BWU0 796 aaKnown RBP25.48■■□□□ 1.67
PSEN1-217ENST00000556533 CHGAP10645 457 aaKnown RBP25.45■■□□□ 1.66
PSEN1-217ENST00000556533 STRCQ7RTU9 1775 aa25.45■■□□□ 1.66
PSEN1-217ENST00000556533 PLA2R1Q13018 1463 aa25.45■■□□□ 1.66
PSEN1-217ENST00000556533 SYNMO15061 1565 aa25.44■■□□□ 1.66
PSEN1-217ENST00000556533 E9PCH4 1651 aa25.42■■□□□ 1.66
PSEN1-217ENST00000556533 PTPRTO14522 1441 aa25.4■■□□□ 1.66
PSEN1-217ENST00000556533 TXNDC2Q86VQ3 553 aa25.4■■□□□ 1.66
PSEN1-217ENST00000556533 RAB3GAP2Q9H2M9 1393 aa25.4■■□□□ 1.66
PSEN1-217ENST00000556533 PIK3C2BO00750 1634 aa25.38■■□□□ 1.65
PSEN1-217ENST00000556533 FOXD1Q16676 465 aa25.38■■□□□ 1.65
PSEN1-217ENST00000556533 MPHOSPH9Q99550 1183 aa25.38■■□□□ 1.65
PSEN1-217ENST00000556533 EID1Q9Y6B2 187 aa25.38■■□□□ 1.65
PSEN1-217ENST00000556533 LTKP29376 864 aa25.35■■□□□ 1.65
PSEN1-217ENST00000556533 ACIN1Q9UKV3 1341 aaKnown RBP25.35■■□□□ 1.65
PSEN1-217ENST00000556533 UBR1Q8IWV7 1749 aa25.34■■□□□ 1.65
PSEN1-217ENST00000556533 TMEM2Q9UHN6 1383 aa25.33■■□□□ 1.65
PSEN1-217ENST00000556533 SENP3Q9H4L4 574 aaPredicted RBP25.31■■□□□ 1.64
PSEN1-217ENST00000556533 NPHP4O75161 1426 aaPredicted RBP25.3■■□□□ 1.64
PSEN1-217ENST00000556533 ADGRB3O60242 1522 aa25.3■■□□□ 1.64
PSEN1-217ENST00000556533 BCANQ96GW7 911 aa25.29■■□□□ 1.64
PSEN1-217ENST00000556533 SCAF11Q99590 1463 aaKnown RBP25.28■■□□□ 1.64
PSEN1-217ENST00000556533 ARHGAP23Q9P227 1491 aa25.28■■□□□ 1.64
PSEN1-217ENST00000556533 SLIT1O75093 1534 aa25.27■■□□□ 1.64
PSEN1-217ENST00000556533 PPP1R15AO75807 674 aaPredicted RBP25.27■■□□□ 1.64
PSEN1-217ENST00000556533 HDGFP51858 240 aaKnown RBP25.27■■□□□ 1.64
PSEN1-217ENST00000556533 ZNF326Q5BKZ1 582 aaKnown RBP25.27■■□□□ 1.64
PSEN1-217ENST00000556533 NUTM2DQ5VT03 806 aaPredicted RBP25.27■■□□□ 1.64
PSEN1-217ENST00000556533 ZNF335Q9H4Z2 1342 aaPredicted RBP25.27■■□□□ 1.64
PSEN1-217ENST00000556533 NEURL4Q96JN8 1562 aa25.27■■□□□ 1.64
PSEN1-217ENST00000556533 MED14O60244 1454 aa25.24■■□□□ 1.63
PSEN1-217ENST00000556533 HRCP23327 699 aa25.24■■□□□ 1.63
PSEN1-217ENST00000556533 CERKQ8TCT0 537 aa25.24■■□□□ 1.63
PSEN1-217ENST00000556533 POLR1AO95602 1720 aaPredicted RBP25.23■■□□□ 1.63
PSEN1-217ENST00000556533 SPHKAPQ2M3C7 1700 aa25.23■■□□□ 1.63
PSEN1-217ENST00000556533 RIMS2Q9UQ26 1411 aa25.23■■□□□ 1.63
PSEN1-217ENST00000556533 TMEM131LA2VDJ0 1609 aa25.22■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms