RNA–Protein interactions for RNA: ENST00000554995.1

PSEN1-211, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 592 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-211ENST00000554995 OXER1Q8TDS5 423 aa10.56□□□□□ -0.72
PSEN1-211ENST00000554995 CCDC102AQ96A19 550 aa10.56□□□□□ -0.72
PSEN1-211ENST00000554995 TMEM92Q6UXU6 159 aa10.55□□□□□ -0.72
PSEN1-211ENST00000554995 DOK7Q18PE1 504 aa10.54□□□□□ -0.72
PSEN1-211ENST00000554995 ZNF687Q8N1G0 1237 aa10.54□□□□□ -0.72
PSEN1-211ENST00000554995 IRF6O14896 467 aa10.53□□□□□ -0.72
PSEN1-211ENST00000554995 GNPATO15228 680 aa10.53□□□□□ -0.72
PSEN1-211ENST00000554995 FAM117AQ9C073 453 aa10.53□□□□□ -0.72
PSEN1-211ENST00000554995 DDX12PQ92771 950 aa10.52□□□□□ -0.73
PSEN1-211ENST00000554995 FCHSD2O94868 740 aa10.51□□□□□ -0.73
PSEN1-211ENST00000554995 AMHR2Q16671 573 aa10.51□□□□□ -0.73
PSEN1-211ENST00000554995 HIC1Q14526 733 aa10.5□□□□□ -0.73
PSEN1-211ENST00000554995 ZNF316A6NFI3 1004 aaPredicted RBP10.49□□□□□ -0.73
PSEN1-211ENST00000554995 TBC1D12O60347 775 aa10.49□□□□□ -0.73
PSEN1-211ENST00000554995 FECHP22830 423 aa10.49□□□□□ -0.73
PSEN1-211ENST00000554995 PARP9Q8IXQ6 854 aa10.49□□□□□ -0.73
PSEN1-211ENST00000554995 EVI5O60447 810 aa10.48□□□□□ -0.73
PSEN1-211ENST00000554995 PRIM1P49642 420 aaKnown RBP10.48□□□□□ -0.73
PSEN1-211ENST00000554995 PLEKHG3A1L390 1219 aa10.47□□□□□ -0.73
PSEN1-211ENST00000554995 DDRGK1Q96HY6 314 aa10.47□□□□□ -0.73
PSEN1-211ENST00000554995 ZMYND15Q9H091 742 aa10.45□□□□□ -0.74
PSEN1-211ENST00000554995 PTGDRQ13258 359 aa10.44□□□□□ -0.74
PSEN1-211ENST00000554995 PLA2G2EQ9NZK7 142 aa10.44□□□□□ -0.74
PSEN1-211ENST00000554995 RIMBP2O15034 1052 aa10.43□□□□□ -0.74
PSEN1-211ENST00000554995 TTLL12Q14166 644 aaPredicted RBP10.41□□□□□ -0.74
PSEN1-211ENST00000554995 PTCD2Q8WV60 388 aaKnown RBP10.41□□□□□ -0.74
PSEN1-211ENST00000554995 ZSWIM6Q9HCJ5 1215 aa10.4□□□□□ -0.74
PSEN1-211ENST00000554995 RSPH6AQ9H0K4 717 aa10.39□□□□□ -0.75
PSEN1-211ENST00000554995 GPR153Q6NV75 609 aa10.37□□□□□ -0.75
PSEN1-211ENST00000554995 GIGYF2Q6Y7W6 1299 aaKnown RBP10.37□□□□□ -0.75
PSEN1-211ENST00000554995 ANKRD13DQ6ZTN6 518 aa10.37□□□□□ -0.75
PSEN1-211ENST00000554995 CDHR5Q9HBB8 845 aa10.37□□□□□ -0.75
PSEN1-211ENST00000554995 ANO8Q9HCE9 1232 aaPredicted RBP10.37□□□□□ -0.75
PSEN1-211ENST00000554995 SLC34A2O95436 690 aa10.35□□□□□ -0.75
PSEN1-211ENST00000554995 EN1Q05925 392 aaPredicted RBP10.35□□□□□ -0.75
PSEN1-211ENST00000554995 GOPCQ9HD26 462 aa10.35□□□□□ -0.75
PSEN1-211ENST00000554995 PHF14O94880 888 aa10.34□□□□□ -0.75
PSEN1-211ENST00000554995 MS4A1P11836 297 aa10.34□□□□□ -0.75
PSEN1-211ENST00000554995 LSM11P83369 360 aaKnown RBP eCLIP10.34□□□□□ -0.75
PSEN1-211ENST00000554995 REPIN1Q9BWE0 567 aaKnown RBP10.34□□□□□ -0.75
PSEN1-211ENST00000554995 NPDC1Q9NQX5 325 aaPredicted RBP10.34□□□□□ -0.75
PSEN1-211ENST00000554995 MAP3K7O43318 606 aa10.33□□□□□ -0.76
PSEN1-211ENST00000554995 EPAS1Q99814 870 aa10.33□□□□□ -0.76
PSEN1-211ENST00000554995 FLIIQ13045 1269 aa10.3□□□□□ -0.76
PSEN1-211ENST00000554995 RBM33Q96EV2 1170 aaKnown RBP10.3□□□□□ -0.76
PSEN1-211ENST00000554995 TMUB1Q9BVT8 246 aa10.3□□□□□ -0.76
PSEN1-211ENST00000554995 PCDHGA10Q9Y5H3 936 aa10.3□□□□□ -0.76
PSEN1-211ENST00000554995 CLCN1P35523 988 aa10.28□□□□□ -0.76
PSEN1-211ENST00000554995 TSR1Q2NL82 804 aaKnown RBP10.28□□□□□ -0.76
PSEN1-211ENST00000554995 PCMTD1Q96MG8 357 aaPredicted RBP10.28□□□□□ -0.76
PSEN1-211ENST00000554995 HCSTQ9UBK5 93 aa10.28□□□□□ -0.76
PSEN1-211ENST00000554995 ONECUT3O60422 494 aaPredicted RBP10.27□□□□□ -0.77
PSEN1-211ENST00000554995 MDM2Q00987 491 aaPredicted RBP10.27□□□□□ -0.77
PSEN1-211ENST00000554995 TYW1BQ6NUM6 668 aa10.27□□□□□ -0.77
PSEN1-211ENST00000554995 PHOX2BQ99453 314 aa10.27□□□□□ -0.77
PSEN1-211ENST00000554995 GPCPD1Q9NPB8 672 aa10.27□□□□□ -0.77
PSEN1-211ENST00000554995 PCDHGA4Q9Y5G9 962 aa10.26□□□□□ -0.77
PSEN1-211ENST00000554995 UBTFP17480 764 aaKnown RBP10.25□□□□□ -0.77
PSEN1-211ENST00000554995 SH3D19Q5HYK7 790 aa10.25□□□□□ -0.77
PSEN1-211ENST00000554995 C1orf115Q9H7X2 142 aa10.24□□□□□ -0.77
PSEN1-211ENST00000554995 SSTR3P32745 418 aaPredicted RBP10.23□□□□□ -0.77
PSEN1-211ENST00000554995 FBXW7Q969H0 707 aa10.23□□□□□ -0.77
PSEN1-211ENST00000554995 JPH4Q96JJ6 628 aa10.22□□□□□ -0.77
PSEN1-211ENST00000554995 KDM4FA0A1W2PPD8 638 aa10.21□□□□□ -0.77
PSEN1-211ENST00000554995 FAM161AQ3B820 660 aa10.21□□□□□ -0.77
PSEN1-211ENST00000554995 ARSIQ5FYB1 569 aa10.2□□□□□ -0.78
PSEN1-211ENST00000554995 ARID3AQ99856 593 aa10.2□□□□□ -0.78
PSEN1-211ENST00000554995 ARID3CA6NKF2 412 aa10.19□□□□□ -0.78
PSEN1-211ENST00000554995 METTL3Q86U44 580 aaKnown RBP10.19□□□□□ -0.78
PSEN1-211ENST00000554995 NLRP7Q8WX94 980 aa10.19□□□□□ -0.78
PSEN1-211ENST00000554995 BEGAINQ9BUH8 593 aa10.19□□□□□ -0.78
PSEN1-211ENST00000554995 OATP04181 439 aa10.18□□□□□ -0.78
PSEN1-211ENST00000554995 FOSBP53539 338 aa10.18□□□□□ -0.78
PSEN1-211ENST00000554995 SKIV2LQ15477 1246 aaKnown RBP10.18□□□□□ -0.78
PSEN1-211ENST00000554995 PADI6Q6TGC4 694 aa10.18□□□□□ -0.78
PSEN1-211ENST00000554995 CERKQ8TCT0 537 aa10.18□□□□□ -0.78
PSEN1-211ENST00000554995 FAM217BQ9NTX9 383 aaPredicted RBP10.18□□□□□ -0.78
PSEN1-211ENST00000554995 A6NJR5 290 aa10.17□□□□□ -0.78
PSEN1-211ENST00000554995 APBB1O00213 710 aa10.17□□□□□ -0.78
PSEN1-211ENST00000554995 PBX2P40425 430 aa10.17□□□□□ -0.78
PSEN1-211ENST00000554995 C6orf132Q5T0Z8 1188 aa10.17□□□□□ -0.78
PSEN1-211ENST00000554995 ADGRG1Q9Y653 693 aa10.17□□□□□ -0.78
PSEN1-211ENST00000554995 MCM6Q14566 821 aa10.16□□□□□ -0.78
PSEN1-211ENST00000554995 POTEEQ6S8J3 1075 aa10.16□□□□□ -0.78
PSEN1-211ENST00000554995 PXYLP1Q8TE99 480 aa10.16□□□□□ -0.78
PSEN1-211ENST00000554995 CLUAP1Q96AJ1 413 aa10.16□□□□□ -0.78
PSEN1-211ENST00000554995 ZNF454Q8N9F8 522 aa10.14□□□□□ -0.79
PSEN1-211ENST00000554995 TTC13Q8NBP0 860 aa10.14□□□□□ -0.79
PSEN1-211ENST00000554995 ZDHHC16Q969W1 377 aa10.14□□□□□ -0.79
PSEN1-211ENST00000554995 PROCA1Q8NCQ7 364 aaPredicted RBP10.13□□□□□ -0.79
PSEN1-211ENST00000554995 KHSRPQ92945 711 aaKnown RBP eCLIP10.13□□□□□ -0.79
PSEN1-211ENST00000554995 POLR3EQ9NVU0 708 aa10.13□□□□□ -0.79
PSEN1-211ENST00000554995 RBM27Q9P2N5 1060 aaKnown RBP10.13□□□□□ -0.79
PSEN1-211ENST00000554995 TRAK2O60296 914 aa10.12□□□□□ -0.79
PSEN1-211ENST00000554995 RGS20O76081 388 aa10.12□□□□□ -0.79
PSEN1-211ENST00000554995 ATP1B4Q9UN42 357 aaPredicted RBP10.12□□□□□ -0.79
PSEN1-211ENST00000554995 MYSM1Q5VVJ2 828 aa10.11□□□□□ -0.79
PSEN1-211ENST00000554995 ADAM33Q9BZ11 813 aa10.11□□□□□ -0.79
PSEN1-211ENST00000554995 IRX2Q9BZI1 471 aaPredicted RBP10.11□□□□□ -0.79
PSEN1-211ENST00000554995 PSDA5PKW4 1024 aaPredicted RBP10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms