RNA–Protein interactions for RNA: ENST00000554927.1

TUBB3-207, Transcript of tubulin beta 3 class III, humanhuman

TSL 2

Gene TUBB3, Length 561 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-207ENST00000554927 MTUS2Q5JR59 1369 aa21.45■■□□□ 1.02
TUBB3-207ENST00000554927 ADGBQ8N7X0 1667 aa21.44■■□□□ 1.02
TUBB3-207ENST00000554927 ZNF644Q9H582 1327 aaPredicted RBP21.44■■□□□ 1.02
TUBB3-207ENST00000554927 ANKLE2Q86XL3 938 aa21.43■■□□□ 1.02
TUBB3-207ENST00000554927 SENP3Q9H4L4 574 aaPredicted RBP21.43■■□□□ 1.02
TUBB3-207ENST00000554927 KIF3BO15066 747 aa21.41■■□□□ 1.02
TUBB3-207ENST00000554927 DHX29Q7Z478 1369 aaKnown RBP21.4■■□□□ 1.02
TUBB3-207ENST00000554927 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.4■■□□□ 1.02
TUBB3-207ENST00000554927 POLR1AO95602 1720 aaPredicted RBP21.4■■□□□ 1.02
TUBB3-207ENST00000554927 NEURL4Q96JN8 1562 aa21.4■■□□□ 1.02
TUBB3-207ENST00000554927 THEMISQ8N1K5 641 aaPredicted RBP21.39■■□□□ 1.01
TUBB3-207ENST00000554927 WASHC2CQ9Y4E1 1318 aa21.38■■□□□ 1.01
TUBB3-207ENST00000554927 RTEL1-TNFRSF6BF6WH68 1400 aa21.37■■□□□ 1.01
TUBB3-207ENST00000554927 PZPP20742 1482 aa21.36■■□□□ 1.01
TUBB3-207ENST00000554927 KDM5DQ9BY66 1539 aa21.35■■□□□ 1.01
TUBB3-207ENST00000554927 MBD5Q9P267 1494 aa21.35■■□□□ 1.01
TUBB3-207ENST00000554927 NPHP4O75161 1426 aaPredicted RBP21.35■■□□□ 1.01
TUBB3-207ENST00000554927 TIAM1Q13009 1591 aa21.33■■□□□ 1.01
TUBB3-207ENST00000554927 VWDEQ8N2E2 1590 aa21.33■■□□□ 1.01
TUBB3-207ENST00000554927 FAM135AQ9P2D6 1515 aa21.33■■□□□ 1
TUBB3-207ENST00000554927 MIA2Q96PC5 1412 aa21.32■■□□□ 1
TUBB3-207ENST00000554927 UGGT1Q9NYU2 1555 aa21.31■■□□□ 1
TUBB3-207ENST00000554927 NLRP1Q9C000 1473 aa21.31■■□□□ 1
TUBB3-207ENST00000554927 EHBP1L1Q8N3D4 1523 aa21.28■■□□□ 1
TUBB3-207ENST00000554927 MED14O60244 1454 aa21.27■■□□□ 1
TUBB3-207ENST00000554927 CCDC141Q6ZP82 1450 aa21.27■■□□□ 1
TUBB3-207ENST00000554927 ALKQ9UM73 1620 aa21.26■□□□□ 0.99
TUBB3-207ENST00000554927 DEPDC5O75140 1603 aa21.26■□□□□ 0.99
TUBB3-207ENST00000554927 CEP162Q5TB80 1403 aa21.24■□□□□ 0.99
TUBB3-207ENST00000554927 IQGAP1P46940 1657 aa21.24■□□□□ 0.99
TUBB3-207ENST00000554927 RSPH4AQ5TD94 716 aa21.23■□□□□ 0.99
TUBB3-207ENST00000554927 LRRC7Q96NW7 1537 aa21.23■□□□□ 0.99
TUBB3-207ENST00000554927 CAMSAP2Q08AD1 1489 aa21.22■□□□□ 0.99
TUBB3-207ENST00000554927 TSPY4P0CV99 314 aa21.22■□□□□ 0.99
TUBB3-207ENST00000554927 TSPY10P0CW01 314 aa21.22■□□□□ 0.99
TUBB3-207ENST00000554927 RNF17Q9BXT8 1623 aaKnown RBP21.2■□□□□ 0.98
TUBB3-207ENST00000554927 SYNMO15061 1565 aa21.17■□□□□ 0.98
TUBB3-207ENST00000554927 STRCP1A6NGW2 1772 aa21.16■□□□□ 0.98
TUBB3-207ENST00000554927 NCOA2Q15596 1464 aa21.15■□□□□ 0.98
TUBB3-207ENST00000554927 RGS17Q9UGC6 210 aaPredicted RBP21.14■□□□□ 0.97
TUBB3-207ENST00000554927 ABCC3O15438 1527 aa21.14■□□□□ 0.97
TUBB3-207ENST00000554927 ERVK-7P63135 1459 aa21.13■□□□□ 0.97
TUBB3-207ENST00000554927 TXNDC2Q86VQ3 553 aa21.11■□□□□ 0.97
TUBB3-207ENST00000554927 SCAF11Q99590 1463 aaKnown RBP21.11■□□□□ 0.97
TUBB3-207ENST00000554927 ARHGEF5Q12774 1597 aa21.1■□□□□ 0.97
TUBB3-207ENST00000554927 ZC3H13Q5T200 1668 aaKnown RBP21.09■□□□□ 0.97
TUBB3-207ENST00000554927 LTKP29376 864 aa21.08■□□□□ 0.97
TUBB3-207ENST00000554927 EID1Q9Y6B2 187 aa21.08■□□□□ 0.97
TUBB3-207ENST00000554927 UBR1Q8IWV7 1749 aa21.04■□□□□ 0.96
TUBB3-207ENST00000554927 POTEAQ6S8J7 498 aa21.03■□□□□ 0.96
TUBB3-207ENST00000554927 STAG3Q9UJ98 1225 aa21.02■□□□□ 0.96
TUBB3-207ENST00000554927 EIF2AK4Q9P2K8 1649 aaKnown RBP21.01■□□□□ 0.95
TUBB3-207ENST00000554927 FAM135BQ49AJ0 1406 aa21.01■□□□□ 0.95
TUBB3-207ENST00000554927 CEP152O94986 1710 aa21■□□□□ 0.95
TUBB3-207ENST00000554927 ARHGAP23Q9P227 1491 aa21■□□□□ 0.95
TUBB3-207ENST00000554927 SLIT1O75093 1534 aa20.99■□□□□ 0.95
TUBB3-207ENST00000554927 MAST1Q9Y2H9 1570 aa20.99■□□□□ 0.95
TUBB3-207ENST00000554927 CFAP65Q6ZU64 1925 aaKnown RBP20.99■□□□□ 0.95
TUBB3-207ENST00000554927 MROH1Q8NDA8 1641 aa20.99■□□□□ 0.95
TUBB3-207ENST00000554927 TMEM94Q12767 1356 aa20.98■□□□□ 0.95
TUBB3-207ENST00000554927 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.97■□□□□ 0.95
TUBB3-207ENST00000554927 PROSER2Q86WR7 435 aaPredicted RBP20.96■□□□□ 0.95
TUBB3-207ENST00000554927 XIRP1Q702N8 1843 aaKnown RBP20.96■□□□□ 0.95
TUBB3-207ENST00000554927 RBM33Q96EV2 1170 aaKnown RBP20.95■□□□□ 0.94
TUBB3-207ENST00000554927 TMEM2Q9UHN6 1383 aa20.95■□□□□ 0.94
TUBB3-207ENST00000554927 DUOX2Q9NRD8 1548 aa20.94■□□□□ 0.94
TUBB3-207ENST00000554927 KCNA6P17658 529 aa20.93■□□□□ 0.94
TUBB3-207ENST00000554927 ARHGAP31Q2M1Z3 1444 aa20.93■□□□□ 0.94
TUBB3-207ENST00000554927 SLC26A8Q96RN1 970 aa20.92■□□□□ 0.94
TUBB3-207ENST00000554927 LRRC9Q6ZRR7 1453 aa20.92■□□□□ 0.94
TUBB3-207ENST00000554927 BCANQ96GW7 911 aa20.91■□□□□ 0.94
TUBB3-207ENST00000554927 KIF15Q9NS87 1388 aa20.91■□□□□ 0.94
TUBB3-207ENST00000554927 RRP7BPQ9NSQ0 103 aa20.91■□□□□ 0.94
TUBB3-207ENST00000554927 ROBO1Q9Y6N7 1651 aa20.91■□□□□ 0.94
TUBB3-207ENST00000554927 PIK3C2BO00750 1634 aa20.9■□□□□ 0.94
TUBB3-207ENST00000554927 MYOM3Q5VTT5 1437 aa20.9■□□□□ 0.94
TUBB3-207ENST00000554927 KANK1Q14678 1352 aa20.89■□□□□ 0.93
TUBB3-207ENST00000554927 PRDM15P57071 1507 aaPredicted RBP20.88■□□□□ 0.93
TUBB3-207ENST00000554927 EFCAB6Q5THR3 1501 aa20.88■□□□□ 0.93
TUBB3-207ENST00000554927 ERBINQ96RT1 1412 aa20.87■□□□□ 0.93
TUBB3-207ENST00000554927 MSH6P52701 1360 aa20.86■□□□□ 0.93
TUBB3-207ENST00000554927 IDI1Q13907 227 aa20.86■□□□□ 0.93
TUBB3-207ENST00000554927 MAP3K1Q13233 1512 aa20.86■□□□□ 0.93
TUBB3-207ENST00000554927 KANK4Q5T7N3 995 aaPredicted RBP20.85■□□□□ 0.93
TUBB3-207ENST00000554927 SLAIN2Q9P270 581 aa20.84■□□□□ 0.93
TUBB3-207ENST00000554927 SETD1AO15047 1707 aaKnown RBP20.84■□□□□ 0.93
TUBB3-207ENST00000554927 JCADQ9P266 1359 aa20.84■□□□□ 0.93
TUBB3-207ENST00000554927 NKTRP30414 1462 aaKnown RBP20.81■□□□□ 0.92
TUBB3-207ENST00000554927 VPS8Q8N3P4 1428 aa20.81■□□□□ 0.92
TUBB3-207ENST00000554927 MEX3CQ5U5Q3 659 aaKnown RBP20.81■□□□□ 0.92
TUBB3-207ENST00000554927 TET3O43151 1660 aa20.8■□□□□ 0.92
TUBB3-207ENST00000554927 PHLPP1O60346 1717 aa20.8■□□□□ 0.92
TUBB3-207ENST00000554927 ABCC5O15440 1437 aa20.79■□□□□ 0.92
TUBB3-207ENST00000554927 PPP1R15AO75807 674 aaPredicted RBP20.77■□□□□ 0.92
TUBB3-207ENST00000554927 C14orf37Q86TY3 774 aa20.77■□□□□ 0.92
TUBB3-207ENST00000554927 TRIM52Q96A61 297 aa20.77■□□□□ 0.92
TUBB3-207ENST00000554927 KDM5AP29375 1690 aaKnown RBP20.77■□□□□ 0.91
TUBB3-207ENST00000554927 NWD1Q149M9 1564 aa20.76■□□□□ 0.91
TUBB3-207ENST00000554927 CHIC2Q9UKJ5 165 aa20.76■□□□□ 0.91
TUBB3-207ENST00000554927 ADGRB3O60242 1522 aa20.75■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms