RNA–Protein interactions for RNA: ENST00000554131.5

PSEN1-210, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 591 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-210ENST00000554131 PRDM15P57071 1507 aaPredicted RBP27.79■■■□□ 2.04
PSEN1-210ENST00000554131 MADDQ8WXG6 1647 aa27.77■■■□□ 2.04
PSEN1-210ENST00000554131 VWDEQ8N2E2 1590 aa27.75■■■□□ 2.03
PSEN1-210ENST00000554131 MLECQ14165 292 aa27.75■■■□□ 2.03
PSEN1-210ENST00000554131 FER1L4A9Z1Z3 1794 aa27.74■■■□□ 2.03
PSEN1-210ENST00000554131 SETD5Q9C0A6 1442 aa27.74■■■□□ 2.03
PSEN1-210ENST00000554131 KDM5DQ9BY66 1539 aa27.72■■■□□ 2.03
PSEN1-210ENST00000554131 FAM135AQ9P2D6 1515 aa27.72■■■□□ 2.03
PSEN1-210ENST00000554131 GGT6Q6P531 493 aa27.72■■■□□ 2.03
PSEN1-210ENST00000554131 KDM4FA0A1W2PPD8 638 aa27.71■■■□□ 2.03
PSEN1-210ENST00000554131 CLTCQ00610 1675 aaKnown RBP27.68■■■□□ 2.02
PSEN1-210ENST00000554131 ZC3H13Q5T200 1668 aaKnown RBP27.68■■■□□ 2.02
PSEN1-210ENST00000554131 ABCC3O15438 1527 aa27.68■■■□□ 2.02
PSEN1-210ENST00000554131 CEP152O94986 1710 aa27.68■■■□□ 2.02
PSEN1-210ENST00000554131 PPP6R1Q9UPN7 881 aa27.68■■■□□ 2.02
PSEN1-210ENST00000554131 RIMS1Q86UR5 1692 aaKnown RBP27.68■■■□□ 2.02
PSEN1-210ENST00000554131 MROH2AA6NES4 1674 aa27.66■■■□□ 2.02
PSEN1-210ENST00000554131 RAB3GAP2Q9H2M9 1393 aa27.66■■■□□ 2.02
PSEN1-210ENST00000554131 IQGAP3Q86VI3 1631 aa27.66■■■□□ 2.02
PSEN1-210ENST00000554131 LMTK2Q8IWU2 1503 aa27.65■■■□□ 2.02
PSEN1-210ENST00000554131 CNTLNQ9NXG0 1405 aa27.62■■■□□ 2.01
PSEN1-210ENST00000554131 CAMSAP1Q5T5Y3 1602 aa27.61■■■□□ 2.01
PSEN1-210ENST00000554131 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.61■■■□□ 2.012e-7■□□□□ 10.6
PSEN1-210ENST00000554131 C3P01024 1663 aa27.59■■■□□ 2.01
PSEN1-210ENST00000554131 WASHC2CQ9Y4E1 1318 aa27.58■■■□□ 2.01
PSEN1-210ENST00000554131 KANK1Q14678 1352 aa27.58■■■□□ 2.01
PSEN1-210ENST00000554131 PZPP20742 1482 aa27.57■■■□□ 2
PSEN1-210ENST00000554131 PTPRMP28827 1452 aa27.57■■■□□ 2
PSEN1-210ENST00000554131 TET3O43151 1660 aa27.57■■■□□ 2
PSEN1-210ENST00000554131 HRCP23327 699 aa27.57■■■□□ 2
PSEN1-210ENST00000554131 NUP155O75694 1391 aa27.57■■■□□ 2
PSEN1-210ENST00000554131 EFCAB6Q5THR3 1501 aa27.56■■■□□ 2
PSEN1-210ENST00000554131 ZMYM3Q14202 1370 aa27.54■■■□□ 2
PSEN1-210ENST00000554131 ARHGAP31Q2M1Z3 1444 aa27.52■■■□□ 2
PSEN1-210ENST00000554131 PCGF6Q9BYE7 350 aa27.52■■■□□ 2
PSEN1-210ENST00000554131 E9PCH4 1651 aa27.5■■□□□ 1.99
PSEN1-210ENST00000554131 ESF1Q9H501 851 aaKnown RBP27.5■■□□□ 1.99
PSEN1-210ENST00000554131 NPATQ14207 1427 aa27.5■■□□□ 1.99
PSEN1-210ENST00000554131 ACIN1Q9UKV3 1341 aaKnown RBP27.47■■□□□ 1.99
PSEN1-210ENST00000554131 CEBPAP49715 358 aaPredicted RBP27.47■■□□□ 1.99
PSEN1-210ENST00000554131 TRIM52Q96A61 297 aa27.47■■□□□ 1.99
PSEN1-210ENST00000554131 PREX1Q8TCU6 1659 aa27.45■■□□□ 1.98
PSEN1-210ENST00000554131 RPRD2Q5VT52 1461 aaKnown RBP27.44■■□□□ 1.98
PSEN1-210ENST00000554131 SPATA31D1Q6ZQQ2 1576 aa27.43■■□□□ 1.98
PSEN1-210ENST00000554131 ERVK-7P63135 1459 aa27.41■■□□□ 1.98
PSEN1-210ENST00000554131 FBXO31Q5XUX0 539 aaPredicted RBP27.4■■□□□ 1.98
PSEN1-210ENST00000554131 MPHOSPH9Q99550 1183 aa27.39■■□□□ 1.98
PSEN1-210ENST00000554131 NOS1P29475 1434 aa27.39■■□□□ 1.97
PSEN1-210ENST00000554131 CFAP65Q6ZU64 1925 aaKnown RBP27.38■■□□□ 1.97
PSEN1-210ENST00000554131 SLC4A1APQ9BWU0 796 aaKnown RBP27.38■■□□□ 1.97
PSEN1-210ENST00000554131 SYNMO15061 1565 aa27.37■■□□□ 1.97
PSEN1-210ENST00000554131 SPHKAPQ2M3C7 1700 aa27.34■■□□□ 1.97
PSEN1-210ENST00000554131 PKD2Q13563 968 aa27.34■■□□□ 1.97
PSEN1-210ENST00000554131 PLPPR3Q6T4P5 718 aa27.34■■□□□ 1.97
PSEN1-210ENST00000554131 PTPRTO14522 1441 aa27.33■■□□□ 1.97
PSEN1-210ENST00000554131 PLA2R1Q13018 1463 aa27.32■■□□□ 1.96
PSEN1-210ENST00000554131 MYO3AQ8NEV4 1616 aa27.31■■□□□ 1.96
PSEN1-210ENST00000554131 TNRQ92752 1358 aa27.3■■□□□ 1.96
PSEN1-210ENST00000554131 PIK3C2BO00750 1634 aa27.3■■□□□ 1.96
PSEN1-210ENST00000554131 SETD1BQ9UPS6 1966 aaKnown RBP27.29■■□□□ 1.96
PSEN1-210ENST00000554131 TRPM2O94759 1503 aa27.28■■□□□ 1.96
PSEN1-210ENST00000554131 FOXD1Q16676 465 aa27.28■■□□□ 1.96
PSEN1-210ENST00000554131 DHX57Q6P158 1386 aaKnown RBP27.26■■□□□ 1.95
PSEN1-210ENST00000554131 ZNF142P52746 1687 aaPredicted RBP27.26■■□□□ 1.95
PSEN1-210ENST00000554131 UGGT1Q9NYU2 1555 aa27.26■■□□□ 1.95
PSEN1-210ENST00000554131 NLRP1Q9C000 1473 aa27.23■■□□□ 1.95
PSEN1-210ENST00000554131 CLTCL1P53675 1640 aa27.23■■□□□ 1.95
PSEN1-210ENST00000554131 CEP170BQ9Y4F5 1589 aaPredicted RBP27.21■■□□□ 1.95
PSEN1-210ENST00000554131 ANKRD30BQ9BXX2 1392 aa27.2■■□□□ 1.94
PSEN1-210ENST00000554131 LMTK3Q96Q04 1460 aa27.19■■□□□ 1.94
PSEN1-210ENST00000554131 UHRF1BP1Q6BDS2 1440 aa27.19■■□□□ 1.94
PSEN1-210ENST00000554131 A2ML1A8K2U0 1454 aa27.19■■□□□ 1.94
PSEN1-210ENST00000554131 IDI1Q13907 227 aa27.17■■□□□ 1.94
PSEN1-210ENST00000554131 KDM5AP29375 1690 aaKnown RBP27.17■■□□□ 1.94
PSEN1-210ENST00000554131 UBR1Q8IWV7 1749 aa27.16■■□□□ 1.94
PSEN1-210ENST00000554131 SLC52A1Q9NWF4 448 aa27.15■■□□□ 1.94
PSEN1-210ENST00000554131 TMEM131LA2VDJ0 1609 aa27.14■■□□□ 1.94
PSEN1-210ENST00000554131 ADGRB3O60242 1522 aa27.13■■□□□ 1.93
PSEN1-210ENST00000554131 MYO5BQ9ULV0 1848 aa27.11■■□□□ 1.93
PSEN1-210ENST00000554131 CCDC144AA2RUR9 1427 aa27.08■■□□□ 1.93
PSEN1-210ENST00000554131 AEBP2Q6ZN18 517 aaPredicted RBP27.08■■□□□ 1.93
PSEN1-210ENST00000554131 KIF1BO60333 1816 aa27.07■■□□□ 1.92
PSEN1-210ENST00000554131 NEURL4Q96JN8 1562 aa27.05■■□□□ 1.92
PSEN1-210ENST00000554131 SPATA31E1Q6ZUB1 1445 aa27.04■■□□□ 1.92
PSEN1-210ENST00000554131 SLIT1O75093 1534 aa27.01■■□□□ 1.91
PSEN1-210ENST00000554131 ARHGAP23Q9P227 1491 aa27.01■■□□□ 1.91
PSEN1-210ENST00000554131 HSPA2P54652 639 aa26.99■■□□□ 1.91
PSEN1-210ENST00000554131 THEMISQ8N1K5 641 aaPredicted RBP26.97■■□□□ 1.91
PSEN1-210ENST00000554131 ZFYVE9O95405 1425 aa26.97■■□□□ 1.91
PSEN1-210ENST00000554131 TMEM2Q9UHN6 1383 aa26.97■■□□□ 1.91
PSEN1-210ENST00000554131 STRCQ7RTU9 1775 aa26.95■■□□□ 1.9
PSEN1-210ENST00000554131 NEXMIFQ5QGS0 1516 aa26.95■■□□□ 1.9
PSEN1-210ENST00000554131 IFT172Q9UG01 1749 aa26.94■■□□□ 1.9
PSEN1-210ENST00000554131 SIN3AQ96ST3 1273 aa26.94■■□□□ 1.9
PSEN1-210ENST00000554131 CHGAP10645 457 aaKnown RBP26.93■■□□□ 1.9
PSEN1-210ENST00000554131 STAG3Q9UJ98 1225 aa26.93■■□□□ 1.9
PSEN1-210ENST00000554131 POLR1AO95602 1720 aaPredicted RBP26.92■■□□□ 1.9
PSEN1-210ENST00000554131 PPLO60437 1756 aa26.92■■□□□ 1.9
PSEN1-210ENST00000554131 RIMS2Q9UQ26 1411 aa26.9■■□□□ 1.9
PSEN1-210ENST00000554131 CLSPNQ9HAW4 1339 aa26.9■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms