RNA–Protein interactions for RNA: ENST00000553866.1

CHGA-203, Transcript of chromogranin A, humanhuman

TSL 3

Gene CHGA, Length 889 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-203ENST00000553866 SETD1BQ9UPS6 1966 aaKnown RBP19.5■□□□□ 0.71
CHGA-203ENST00000553866 PPP6R1Q9UPN7 881 aa19.49■□□□□ 0.71
CHGA-203ENST00000553866 RNF17Q9BXT8 1623 aaKnown RBP19.49■□□□□ 0.71
CHGA-203ENST00000553866 PTPRKQ15262 1439 aa19.49■□□□□ 0.71
CHGA-203ENST00000553866 MROH1Q8NDA8 1641 aa19.48■□□□□ 0.71
CHGA-203ENST00000553866 EIF2AK4Q9P2K8 1649 aaKnown RBP19.48■□□□□ 0.71
CHGA-203ENST00000553866 KDM5DQ9BY66 1539 aa19.47■□□□□ 0.71
CHGA-203ENST00000553866 UHRF1BP1Q6BDS2 1440 aa19.47■□□□□ 0.71
CHGA-203ENST00000553866 NPATQ14207 1427 aa19.46■□□□□ 0.71
CHGA-203ENST00000553866 NCOA1Q15788 1441 aa19.46■□□□□ 0.71
CHGA-203ENST00000553866 WASHC2CQ9Y4E1 1318 aa19.45■□□□□ 0.7
CHGA-203ENST00000553866 ADGRL2O95490 1459 aa19.44■□□□□ 0.7
CHGA-203ENST00000553866 FBXO31Q5XUX0 539 aaPredicted RBP19.44■□□□□ 0.7
CHGA-203ENST00000553866 ANKRD30AQ9BXX3 1397 aa19.44■□□□□ 0.7
CHGA-203ENST00000553866 ERBINQ96RT1 1412 aa19.42■□□□□ 0.7
CHGA-203ENST00000553866 ABCC3O15438 1527 aa19.42■□□□□ 0.7
CHGA-203ENST00000553866 FAM135AQ9P2D6 1515 aa19.41■□□□□ 0.7
CHGA-203ENST00000553866 CEP152O94986 1710 aa19.41■□□□□ 0.7
CHGA-203ENST00000553866 STRCQ7RTU9 1775 aa19.41■□□□□ 0.7
CHGA-203ENST00000553866 MYO3AQ8NEV4 1616 aa19.4■□□□□ 0.7
CHGA-203ENST00000553866 PZPP20742 1482 aa19.4■□□□□ 0.7
CHGA-203ENST00000553866 DEPDC5O75140 1603 aa19.38■□□□□ 0.69
CHGA-203ENST00000553866 PRDM15P57071 1507 aaPredicted RBP19.38■□□□□ 0.69
CHGA-203ENST00000553866 ZC3H13Q5T200 1668 aaKnown RBP19.37■□□□□ 0.69
CHGA-203ENST00000553866 ITGAEP38570 1179 aa19.37■□□□□ 0.69
CHGA-203ENST00000553866 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.36■□□□□ 0.69
CHGA-203ENST00000553866 ZNF142P52746 1687 aaPredicted RBP19.35■□□□□ 0.69
CHGA-203ENST00000553866 CAMSAP1Q5T5Y3 1602 aa19.35■□□□□ 0.69
CHGA-203ENST00000553866 CEP170BQ9Y4F5 1589 aaPredicted RBP19.35■□□□□ 0.69
CHGA-203ENST00000553866 TNRQ92752 1358 aa19.34■□□□□ 0.69
CHGA-203ENST00000553866 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.34■□□□□ 0.69
CHGA-203ENST00000553866 RRBP1Q9P2E9 1410 aaKnown RBP19.34■□□□□ 0.69
CHGA-203ENST00000553866 CFAP65Q6ZU64 1925 aaKnown RBP19.33■□□□□ 0.68
CHGA-203ENST00000553866 ANKRD50Q9ULJ7 1429 aa19.33■□□□□ 0.68
CHGA-203ENST00000553866 VWDEQ8N2E2 1590 aa19.32■□□□□ 0.68
CHGA-203ENST00000553866 ROCK1Q13464 1354 aa19.31■□□□□ 0.68
CHGA-203ENST00000553866 A2ML1A8K2U0 1454 aa19.3■□□□□ 0.68
CHGA-203ENST00000553866 SPATA31D1Q6ZQQ2 1576 aa19.3■□□□□ 0.68
CHGA-203ENST00000553866 ERVK-7P63135 1459 aa19.29■□□□□ 0.68
CHGA-203ENST00000553866 NCKAP5LQ9HCH0 1330 aa19.27■□□□□ 0.68
CHGA-203ENST00000553866 LMTK2Q8IWU2 1503 aa19.27■□□□□ 0.68
CHGA-203ENST00000553866 ARHGAP31Q2M1Z3 1444 aa19.26■□□□□ 0.67
CHGA-203ENST00000553866 KANK1Q14678 1352 aa19.26■□□□□ 0.67
CHGA-203ENST00000553866 PLA2R1Q13018 1463 aa19.23■□□□□ 0.67
CHGA-203ENST00000553866 NLRP1Q9C000 1473 aa19.23■□□□□ 0.67
CHGA-203ENST00000553866 UNC13BO14795 1591 aa19.23■□□□□ 0.67
CHGA-203ENST00000553866 PTPRTO14522 1441 aa19.22■□□□□ 0.67
CHGA-203ENST00000553866 EFCAB6Q5THR3 1501 aa19.21■□□□□ 0.67
CHGA-203ENST00000553866 UGGT1Q9NYU2 1555 aa19.2■□□□□ 0.66
CHGA-203ENST00000553866 DMRT2Q9Y5R5 561 aa19.2■□□□□ 0.66
CHGA-203ENST00000553866 ILDR1Q86SU0 546 aaPredicted RBP19.18■□□□□ 0.66
CHGA-203ENST00000553866 SYNMO15061 1565 aa19.18■□□□□ 0.66
CHGA-203ENST00000553866 NEURL4Q96JN8 1562 aa19.17■□□□□ 0.66
CHGA-203ENST00000553866 TET3O43151 1660 aa19.17■□□□□ 0.66
CHGA-203ENST00000553866 UBR1Q8IWV7 1749 aa19.17■□□□□ 0.66
CHGA-203ENST00000553866 PKD2Q13563 968 aa19.16■□□□□ 0.66
CHGA-203ENST00000553866 NOS1P29475 1434 aa19.16■□□□□ 0.66
CHGA-203ENST00000553866 NAIPQ13075 1403 aa19.16■□□□□ 0.66
CHGA-203ENST00000553866 PIK3C2BO00750 1634 aa19.15■□□□□ 0.66
CHGA-203ENST00000553866 IQGAP3Q86VI3 1631 aa19.15■□□□□ 0.66
CHGA-203ENST00000553866 POLR1AO95602 1720 aaPredicted RBP19.15■□□□□ 0.66
CHGA-203ENST00000553866 THEMISQ8N1K5 641 aaPredicted RBP19.15■□□□□ 0.66
CHGA-203ENST00000553866 E9PCH4 1651 aa19.14■□□□□ 0.65
CHGA-203ENST00000553866 GCC2Q8IWJ2 1684 aa19.14■□□□□ 0.65
CHGA-203ENST00000553866 IDI1Q13907 227 aa19.13■□□□□ 0.65
CHGA-203ENST00000553866 NUP155O75694 1391 aa19.13■□□□□ 0.65
CHGA-203ENST00000553866 CERKQ8TCT0 537 aa19.12■□□□□ 0.65
CHGA-203ENST00000553866 LTBP4Q8N2S1 1624 aa19.11■□□□□ 0.65
CHGA-203ENST00000553866 RPRD2Q5VT52 1461 aaKnown RBP19.1■□□□□ 0.65
CHGA-203ENST00000553866 ANKLE2Q86XL3 938 aa19.1■□□□□ 0.65
CHGA-203ENST00000553866 ZNF335Q9H4Z2 1342 aaPredicted RBP19.09■□□□□ 0.65
CHGA-203ENST00000553866 HFM1A2PYH4 1435 aa19.08■□□□□ 0.65
CHGA-203ENST00000553866 ARHGAP23Q9P227 1491 aa19.08■□□□□ 0.64
CHGA-203ENST00000553866 LTKP29376 864 aa19.07■□□□□ 0.64
CHGA-203ENST00000553866 MED14O60244 1454 aa19.07■□□□□ 0.64
CHGA-203ENST00000553866 SLIT1O75093 1534 aa19.06■□□□□ 0.64
CHGA-203ENST00000553866 NPHP4O75161 1426 aaPredicted RBP19.06■□□□□ 0.64
CHGA-203ENST00000553866 FBXO41Q8TF61 875 aa19.05■□□□□ 0.64
CHGA-203ENST00000553866 MYO5BQ9ULV0 1848 aa19.04■□□□□ 0.64
CHGA-203ENST00000553866 KDM5AP29375 1690 aaKnown RBP19.04■□□□□ 0.64
CHGA-203ENST00000553866 IQGAP1P46940 1657 aa19.04■□□□□ 0.64
CHGA-203ENST00000553866 ADGRB3O60242 1522 aa19.04■□□□□ 0.64
CHGA-203ENST00000553866 SLC52A1Q9NWF4 448 aa19.03■□□□□ 0.64
CHGA-203ENST00000553866 STAG3Q9UJ98 1225 aa19.03■□□□□ 0.64
CHGA-203ENST00000553866 TMEM2Q9UHN6 1383 aa19.03■□□□□ 0.64
CHGA-203ENST00000553866 SCAF11Q99590 1463 aaKnown RBP19.02■□□□□ 0.63
CHGA-203ENST00000553866 TXNDC2Q86VQ3 553 aa19.01■□□□□ 0.63
CHGA-203ENST00000553866 TMEM131LA2VDJ0 1609 aa19■□□□□ 0.63
CHGA-203ENST00000553866 TRIM52Q96A61 297 aa18.99■□□□□ 0.63
CHGA-203ENST00000553866 SPHKAPQ2M3C7 1700 aa18.97■□□□□ 0.63
CHGA-203ENST00000553866 STRCP1A6NGW2 1772 aa18.97■□□□□ 0.63
CHGA-203ENST00000553866 EID1Q9Y6B2 187 aa18.96■□□□□ 0.63
CHGA-203ENST00000553866 CHGAP10645 457 aaKnown RBP18.95■□□□□ 0.62
CHGA-203ENST00000553866 ZFYVE9O95405 1425 aa18.94■□□□□ 0.62
CHGA-203ENST00000553866 SENP3Q9H4L4 574 aaPredicted RBP18.94■□□□□ 0.62
CHGA-203ENST00000553866 RIMS2Q9UQ26 1411 aa18.92■□□□□ 0.62
CHGA-203ENST00000553866 CLTCL1P53675 1640 aa18.92■□□□□ 0.62
CHGA-203ENST00000553866 FOXD1Q16676 465 aa18.91■□□□□ 0.62
CHGA-203ENST00000553866 SLC4A1APQ9BWU0 796 aaKnown RBP18.91■□□□□ 0.62
CHGA-203ENST00000553866 IQSEC2Q5JU85 1478 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms