RNA–Protein interactions for RNA: ENST00000553831.5

PRKCH-207, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-207ENST00000553831 UHRF1BP1Q6BDS2 1440 aa21.97■■□□□ 1.11
PRKCH-207ENST00000553831 RNF17Q9BXT8 1623 aaKnown RBP21.97■■□□□ 1.11
PRKCH-207ENST00000553831 KDM5DQ9BY66 1539 aa21.96■■□□□ 1.11
PRKCH-207ENST00000553831 FAM135AQ9P2D6 1515 aa21.96■■□□□ 1.11
PRKCH-207ENST00000553831 SETD1BQ9UPS6 1966 aaKnown RBP21.96■■□□□ 1.11
PRKCH-207ENST00000553831 CHIC2Q9UKJ5 165 aa21.95■■□□□ 1.1
PRKCH-207ENST00000553831 NPATQ14207 1427 aa21.95■■□□□ 1.1
PRKCH-207ENST00000553831 RRP7BPQ9NSQ0 103 aa21.94■■□□□ 1.1
PRKCH-207ENST00000553831 PTPRKQ15262 1439 aa21.93■■□□□ 1.1
PRKCH-207ENST00000553831 ERBINQ96RT1 1412 aa21.92■■□□□ 1.1
PRKCH-207ENST00000553831 ANKRD30AQ9BXX3 1397 aa21.92■■□□□ 1.1
PRKCH-207ENST00000553831 MROH1Q8NDA8 1641 aa21.91■■□□□ 1.1
PRKCH-207ENST00000553831 ADGRL2O95490 1459 aa21.91■■□□□ 1.1
PRKCH-207ENST00000553831 WASHC2CQ9Y4E1 1318 aa21.9■■□□□ 1.1
PRKCH-207ENST00000553831 NCOA1Q15788 1441 aa21.89■■□□□ 1.1
PRKCH-207ENST00000553831 ABCC3O15438 1527 aa21.89■■□□□ 1.09
PRKCH-207ENST00000553831 PZPP20742 1482 aa21.88■■□□□ 1.09
PRKCH-207ENST00000553831 ZC3H13Q5T200 1668 aaKnown RBP21.86■■□□□ 1.09
PRKCH-207ENST00000553831 MYO3AQ8NEV4 1616 aa21.86■■□□□ 1.09
PRKCH-207ENST00000553831 PRDM15P57071 1507 aaPredicted RBP21.85■■□□□ 1.09
PRKCH-207ENST00000553831 DEPDC5O75140 1603 aa21.83■■□□□ 1.08
PRKCH-207ENST00000553831 FBXO31Q5XUX0 539 aaPredicted RBP21.82■■□□□ 1.08
PRKCH-207ENST00000553831 CEP152O94986 1710 aa21.82■■□□□ 1.08
PRKCH-207ENST00000553831 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.82■■□□□ 1.08
PRKCH-207ENST00000553831 ZNF142P52746 1687 aaPredicted RBP21.82■■□□□ 1.08
PRKCH-207ENST00000553831 CEP170BQ9Y4F5 1589 aaPredicted RBP21.8■■□□□ 1.08
PRKCH-207ENST00000553831 TNRQ92752 1358 aa21.8■■□□□ 1.08
PRKCH-207ENST00000553831 RRBP1Q9P2E9 1410 aaKnown RBP21.8■■□□□ 1.08
PRKCH-207ENST00000553831 CAMSAP1Q5T5Y3 1602 aa21.79■■□□□ 1.08
PRKCH-207ENST00000553831 ANKRD50Q9ULJ7 1429 aa21.79■■□□□ 1.08
PRKCH-207ENST00000553831 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.78■■□□□ 1.08
PRKCH-207ENST00000553831 STRCQ7RTU9 1775 aa21.78■■□□□ 1.08
PRKCH-207ENST00000553831 ROCK1Q13464 1354 aa21.77■■□□□ 1.08
PRKCH-207ENST00000553831 ITGAEP38570 1179 aa21.77■■□□□ 1.08
PRKCH-207ENST00000553831 A2ML1A8K2U0 1454 aa21.76■■□□□ 1.07
PRKCH-207ENST00000553831 KANK1Q14678 1352 aa21.74■■□□□ 1.07
PRKCH-207ENST00000553831 SPATA31D1Q6ZQQ2 1576 aa21.74■■□□□ 1.07
PRKCH-207ENST00000553831 VWDEQ8N2E2 1590 aa21.74■■□□□ 1.07
PRKCH-207ENST00000553831 ERVK-7P63135 1459 aa21.74■■□□□ 1.07
PRKCH-207ENST00000553831 ILDR1Q86SU0 546 aaPredicted RBP21.73■■□□□ 1.07
PRKCH-207ENST00000553831 LMTK2Q8IWU2 1503 aa21.72■■□□□ 1.07
PRKCH-207ENST00000553831 ARHGAP31Q2M1Z3 1444 aa21.72■■□□□ 1.07
PRKCH-207ENST00000553831 NLRP1Q9C000 1473 aa21.71■■□□□ 1.07
PRKCH-207ENST00000553831 PLA2R1Q13018 1463 aa21.7■■□□□ 1.06
PRKCH-207ENST00000553831 UNC13BO14795 1591 aa21.67■■□□□ 1.06
PRKCH-207ENST00000553831 PTPRTO14522 1441 aa21.67■■□□□ 1.06
PRKCH-207ENST00000553831 DMRT2Q9Y5R5 561 aa21.67■■□□□ 1.06
PRKCH-207ENST00000553831 EFCAB6Q5THR3 1501 aa21.66■■□□□ 1.06
PRKCH-207ENST00000553831 CFAP65Q6ZU64 1925 aaKnown RBP21.66■■□□□ 1.06
PRKCH-207ENST00000553831 NCKAP5LQ9HCH0 1330 aa21.65■■□□□ 1.06
PRKCH-207ENST00000553831 UGGT1Q9NYU2 1555 aa21.65■■□□□ 1.06
PRKCH-207ENST00000553831 PKD2Q13563 968 aa21.61■■□□□ 1.05
PRKCH-207ENST00000553831 TET3O43151 1660 aa21.6■■□□□ 1.05
PRKCH-207ENST00000553831 THEMISQ8N1K5 641 aaPredicted RBP21.58■■□□□ 1.05
PRKCH-207ENST00000553831 IQGAP3Q86VI3 1631 aa21.58■■□□□ 1.04
PRKCH-207ENST00000553831 SYNMO15061 1565 aa21.57■■□□□ 1.04
PRKCH-207ENST00000553831 NOS1P29475 1434 aa21.57■■□□□ 1.04
PRKCH-207ENST00000553831 POLR1AO95602 1720 aaPredicted RBP21.57■■□□□ 1.04
PRKCH-207ENST00000553831 RPRD2Q5VT52 1461 aaKnown RBP21.57■■□□□ 1.04
PRKCH-207ENST00000553831 NEURL4Q96JN8 1562 aa21.57■■□□□ 1.04
PRKCH-207ENST00000553831 NAIPQ13075 1403 aa21.56■■□□□ 1.04
PRKCH-207ENST00000553831 UBR1Q8IWV7 1749 aa21.56■■□□□ 1.04
PRKCH-207ENST00000553831 GCC2Q8IWJ2 1684 aa21.56■■□□□ 1.04
PRKCH-207ENST00000553831 NUP155O75694 1391 aa21.55■■□□□ 1.04
PRKCH-207ENST00000553831 PIK3C2BO00750 1634 aa21.54■■□□□ 1.04
PRKCH-207ENST00000553831 ANKLE2Q86XL3 938 aa21.52■■□□□ 1.04
PRKCH-207ENST00000553831 HFM1A2PYH4 1435 aa21.52■■□□□ 1.04
PRKCH-207ENST00000553831 E9PCH4 1651 aa21.51■■□□□ 1.03
PRKCH-207ENST00000553831 CERKQ8TCT0 537 aa21.5■■□□□ 1.03
PRKCH-207ENST00000553831 LTBP4Q8N2S1 1624 aa21.5■■□□□ 1.03
PRKCH-207ENST00000553831 IDI1Q13907 227 aa21.49■■□□□ 1.03
PRKCH-207ENST00000553831 MED14O60244 1454 aa21.48■■□□□ 1.03
PRKCH-207ENST00000553831 ARHGAP23Q9P227 1491 aa21.48■■□□□ 1.03
PRKCH-207ENST00000553831 SLIT1O75093 1534 aa21.48■■□□□ 1.03
PRKCH-207ENST00000553831 NPHP4O75161 1426 aaPredicted RBP21.47■■□□□ 1.03
PRKCH-207ENST00000553831 ADGRB3O60242 1522 aa21.47■■□□□ 1.03
PRKCH-207ENST00000553831 ZNF335Q9H4Z2 1342 aaPredicted RBP21.47■■□□□ 1.03
PRKCH-207ENST00000553831 KDM5AP29375 1690 aaKnown RBP21.47■■□□□ 1.03
PRKCH-207ENST00000553831 FBXO41Q8TF61 875 aa21.46■■□□□ 1.03
PRKCH-207ENST00000553831 STAG3Q9UJ98 1225 aa21.46■■□□□ 1.03
PRKCH-207ENST00000553831 SCAF11Q99590 1463 aaKnown RBP21.45■■□□□ 1.03
PRKCH-207ENST00000553831 SLC52A1Q9NWF4 448 aa21.45■■□□□ 1.02
PRKCH-207ENST00000553831 IQGAP1P46940 1657 aa21.44■■□□□ 1.02
PRKCH-207ENST00000553831 TMEM2Q9UHN6 1383 aa21.44■■□□□ 1.02
PRKCH-207ENST00000553831 LTKP29376 864 aa21.42■■□□□ 1.02
PRKCH-207ENST00000553831 TXNDC2Q86VQ3 553 aa21.4■■□□□ 1.02
PRKCH-207ENST00000553831 EID1Q9Y6B2 187 aa21.38■■□□□ 1.01
PRKCH-207ENST00000553831 TMEM131LA2VDJ0 1609 aa21.37■■□□□ 1.01
PRKCH-207ENST00000553831 TRIM52Q96A61 297 aa21.37■■□□□ 1.01
PRKCH-207ENST00000553831 SPHKAPQ2M3C7 1700 aa21.36■■□□□ 1.01
PRKCH-207ENST00000553831 MYO5BQ9ULV0 1848 aa21.36■■□□□ 1.01
PRKCH-207ENST00000553831 IQSEC2Q5JU85 1478 aa21.35■■□□□ 1.01
PRKCH-207ENST00000553831 ZFYVE9O95405 1425 aa21.33■■□□□ 1.01
PRKCH-207ENST00000553831 CHGAP10645 457 aaKnown RBP21.33■■□□□ 1.01
PRKCH-207ENST00000553831 CPS1P31327 1500 aa21.32■■□□□ 1
PRKCH-207ENST00000553831 RIMS2Q9UQ26 1411 aa21.31■■□□□ 1
PRKCH-207ENST00000553831 TRPM2O94759 1503 aa21.3■■□□□ 1
PRKCH-207ENST00000553831 SLC4A1APQ9BWU0 796 aaKnown RBP21.3■■□□□ 1
PRKCH-207ENST00000553831 CLTCL1P53675 1640 aa21.28■■□□□ 1
PRKCH-207ENST00000553831 SETD5Q9C0A6 1442 aa21.28■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms