RNA–Protein interactions for RNA: ENST00000553807.1

XRCC3-205, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 2

Gene XRCC3, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-205ENST00000553807 PPP6R1Q9UPN7 881 aa31.44■■■□□ 2.62
XRCC3-205ENST00000553807 KDM5DQ9BY66 1539 aa31.44■■■□□ 2.62
XRCC3-205ENST00000553807 RNF17Q9BXT8 1623 aaKnown RBP31.43■■■□□ 2.62
XRCC3-205ENST00000553807 HSPA2P54652 639 aa31.41■■■□□ 2.62
XRCC3-205ENST00000553807 ANKRD30AQ9BXX3 1397 aa31.41■■■□□ 2.62
XRCC3-205ENST00000553807 UHRF1BP1Q6BDS2 1440 aa31.41■■■□□ 2.62
XRCC3-205ENST00000553807 FAM135AQ9P2D6 1515 aa31.4■■■□□ 2.62
XRCC3-205ENST00000553807 ERBINQ96RT1 1412 aa31.38■■■□□ 2.61
XRCC3-205ENST00000553807 NPATQ14207 1427 aa31.37■■■□□ 2.61
XRCC3-205ENST00000553807 ADGRL2O95490 1459 aa31.36■■■□□ 2.61
XRCC3-205ENST00000553807 WASHC2CQ9Y4E1 1318 aa31.36■■■□□ 2.61
XRCC3-205ENST00000553807 SETD1BQ9UPS6 1966 aaKnown RBP31.35■■■□□ 2.61
XRCC3-205ENST00000553807 MROH1Q8NDA8 1641 aa31.35■■■□□ 2.61
XRCC3-205ENST00000553807 NCOA1Q15788 1441 aa31.34■■■□□ 2.61
XRCC3-205ENST00000553807 PTPRKQ15262 1439 aa31.33■■■□□ 2.61
XRCC3-205ENST00000553807 ABCC3O15438 1527 aa31.31■■■□□ 2.6
XRCC3-205ENST00000553807 ZC3H13Q5T200 1668 aaKnown RBP31.31■■■□□ 2.6
XRCC3-205ENST00000553807 MYO3AQ8NEV4 1616 aa31.28■■■□□ 2.6
XRCC3-205ENST00000553807 PRDM15P57071 1507 aaPredicted RBP31.28■■■□□ 2.6
XRCC3-205ENST00000553807 PZPP20742 1482 aa31.27■■■□□ 2.6
XRCC3-205ENST00000553807 CEP152O94986 1710 aa31.27■■■□□ 2.6
XRCC3-205ENST00000553807 ITGAEP38570 1179 aa31.26■■■□□ 2.59
XRCC3-205ENST00000553807 DEPDC5O75140 1603 aa31.24■■■□□ 2.59
XRCC3-205ENST00000553807 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP31.24■■■□□ 2.59
XRCC3-205ENST00000553807 GRWD1Q9BQ67 446 aaKnown RBP eCLIP31.22■■■□□ 2.59
XRCC3-205ENST00000553807 RRBP1Q9P2E9 1410 aaKnown RBP31.22■■■□□ 2.59
XRCC3-205ENST00000553807 CAMSAP1Q5T5Y3 1602 aa31.21■■■□□ 2.59
XRCC3-205ENST00000553807 FBXO31Q5XUX0 539 aaPredicted RBP31.21■■■□□ 2.59
XRCC3-205ENST00000553807 ZNF142P52746 1687 aaPredicted RBP31.19■■■□□ 2.58
XRCC3-205ENST00000553807 ANKRD50Q9ULJ7 1429 aa31.19■■■□□ 2.58
XRCC3-205ENST00000553807 TNRQ92752 1358 aa31.18■■■□□ 2.58
XRCC3-205ENST00000553807 CEP170BQ9Y4F5 1589 aaPredicted RBP31.18■■■□□ 2.58
XRCC3-205ENST00000553807 ROCK1Q13464 1354 aa31.17■■■□□ 2.58
XRCC3-205ENST00000553807 KANK1Q14678 1352 aa31.17■■■□□ 2.58
XRCC3-205ENST00000553807 STRCQ7RTU9 1775 aa31.12■■■□□ 2.57
XRCC3-205ENST00000553807 A2ML1A8K2U0 1454 aa31.1■■■□□ 2.57
XRCC3-205ENST00000553807 ERVK-7P63135 1459 aa31.1■■■□□ 2.57
XRCC3-205ENST00000553807 SPATA31D1Q6ZQQ2 1576 aa31.09■■■□□ 2.57
XRCC3-205ENST00000553807 VWDEQ8N2E2 1590 aa31.09■■■□□ 2.57
XRCC3-205ENST00000553807 LMTK2Q8IWU2 1503 aa31.06■■■□□ 2.56
XRCC3-205ENST00000553807 ARHGAP31Q2M1Z3 1444 aa31.05■■■□□ 2.56
XRCC3-205ENST00000553807 NLRP1Q9C000 1473 aa31.04■■■□□ 2.56
XRCC3-205ENST00000553807 UNC13BO14795 1591 aa31.04■■■□□ 2.56
XRCC3-205ENST00000553807 CFAP65Q6ZU64 1925 aaKnown RBP31.03■■■□□ 2.56
XRCC3-205ENST00000553807 EFCAB6Q5THR3 1501 aa31.02■■■□□ 2.56
XRCC3-205ENST00000553807 PLA2R1Q13018 1463 aa31■■■□□ 2.55
XRCC3-205ENST00000553807 DMRT2Q9Y5R5 561 aa30.98■■■□□ 2.55
XRCC3-205ENST00000553807 UGGT1Q9NYU2 1555 aa30.96■■■□□ 2.55
XRCC3-205ENST00000553807 NCKAP5LQ9HCH0 1330 aa30.95■■■□□ 2.54
XRCC3-205ENST00000553807 TET3O43151 1660 aa30.94■■■□□ 2.54
XRCC3-205ENST00000553807 PTPRTO14522 1441 aa30.93■■■□□ 2.54
XRCC3-205ENST00000553807 GCC2Q8IWJ2 1684 aa30.92■■■□□ 2.54
XRCC3-205ENST00000553807 IQGAP3Q86VI3 1631 aa30.91■■■□□ 2.54
XRCC3-205ENST00000553807 NAIPQ13075 1403 aa30.89■■■□□ 2.53
XRCC3-205ENST00000553807 PKD2Q13563 968 aa30.88■■■□□ 2.53
XRCC3-205ENST00000553807 NUP155O75694 1391 aa30.88■■■□□ 2.53
XRCC3-205ENST00000553807 THEMISQ8N1K5 641 aaPredicted RBP30.87■■■□□ 2.53
XRCC3-205ENST00000553807 SYNMO15061 1565 aa30.87■■■□□ 2.53
XRCC3-205ENST00000553807 POLR1AO95602 1720 aaPredicted RBP30.87■■■□□ 2.53
XRCC3-205ENST00000553807 RPRD2Q5VT52 1461 aaKnown RBP30.86■■■□□ 2.53
XRCC3-205ENST00000553807 UBR1Q8IWV7 1749 aa30.86■■■□□ 2.53
XRCC3-205ENST00000553807 NOS1P29475 1434 aa30.84■■■□□ 2.53
XRCC3-205ENST00000553807 PIK3C2BO00750 1634 aa30.84■■■□□ 2.53
XRCC3-205ENST00000553807 HFM1A2PYH4 1435 aa30.83■■■□□ 2.53
XRCC3-205ENST00000553807 E9PCH4 1651 aa30.81■■■□□ 2.52
XRCC3-205ENST00000553807 NEURL4Q96JN8 1562 aa30.81■■■□□ 2.52
XRCC3-205ENST00000553807 ANKLE2Q86XL3 938 aa30.78■■■□□ 2.52
XRCC3-205ENST00000553807 STAG3Q9UJ98 1225 aa30.76■■■□□ 2.51
XRCC3-205ENST00000553807 IDI1Q13907 227 aa30.75■■■□□ 2.51
XRCC3-205ENST00000553807 ADGRB3O60242 1522 aa30.73■■■□□ 2.51
XRCC3-205ENST00000553807 NPHP4O75161 1426 aaPredicted RBP30.71■■■□□ 2.51
XRCC3-205ENST00000553807 KDM5AP29375 1690 aaKnown RBP30.71■■■□□ 2.51
XRCC3-205ENST00000553807 SLIT1O75093 1534 aa30.7■■■□□ 2.51
XRCC3-205ENST00000553807 CERKQ8TCT0 537 aa30.7■■■□□ 2.51
XRCC3-205ENST00000553807 SLC52A1Q9NWF4 448 aa30.7■■■□□ 2.51
XRCC3-205ENST00000553807 ARHGAP23Q9P227 1491 aa30.69■■■□□ 2.5
XRCC3-205ENST00000553807 IQGAP1P46940 1657 aa30.68■■■□□ 2.5
XRCC3-205ENST00000553807 ILDR1Q86SU0 546 aaPredicted RBP30.68■■■□□ 2.5
XRCC3-205ENST00000553807 MED14O60244 1454 aa30.68■■■□□ 2.5
XRCC3-205ENST00000553807 SCAF11Q99590 1463 aaKnown RBP30.68■■■□□ 2.5
XRCC3-205ENST00000553807 ZNF335Q9H4Z2 1342 aaPredicted RBP30.68■■■□□ 2.5
XRCC3-205ENST00000553807 LTBP4Q8N2S1 1624 aa30.67■■■□□ 2.5
XRCC3-205ENST00000553807 TRIM52Q96A61 297 aa30.67■■■□□ 2.5
XRCC3-205ENST00000553807 TMEM2Q9UHN6 1383 aa30.66■■■□□ 2.5
XRCC3-205ENST00000553807 SPHKAPQ2M3C7 1700 aa30.62■■■□□ 2.49
XRCC3-205ENST00000553807 TXNDC2Q86VQ3 553 aa30.62■■■□□ 2.49
XRCC3-205ENST00000553807 LTKP29376 864 aa30.61■■■□□ 2.49
XRCC3-205ENST00000553807 EID1Q9Y6B2 187 aa30.61■■■□□ 2.49
XRCC3-205ENST00000553807 MYO5BQ9ULV0 1848 aa30.6■■■□□ 2.49
XRCC3-205ENST00000553807 TMEM131LA2VDJ0 1609 aa30.59■■■□□ 2.49
XRCC3-205ENST00000553807 FBXO41Q8TF61 875 aa30.59■■■□□ 2.49
XRCC3-205ENST00000553807 CHGAP10645 457 aaKnown RBP30.58■■■□□ 2.49
XRCC3-205ENST00000553807 SLC4A1APQ9BWU0 796 aaKnown RBP30.53■■■□□ 2.48
XRCC3-205ENST00000553807 SETD5Q9C0A6 1442 aa30.51■■■□□ 2.47
XRCC3-205ENST00000553807 TRPM2O94759 1503 aa30.51■■■□□ 2.47
XRCC3-205ENST00000553807 RIMS2Q9UQ26 1411 aa30.5■■■□□ 2.47
XRCC3-205ENST00000553807 ZFYVE9O95405 1425 aa30.49■■■□□ 2.47
XRCC3-205ENST00000553807 CLTCL1P53675 1640 aa30.48■■■□□ 2.47
XRCC3-205ENST00000553807 CPS1P31327 1500 aa30.47■■■□□ 2.47
XRCC3-205ENST00000553807 IQSEC2Q5JU85 1478 aa30.47■■■□□ 2.47
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms