RNA–Protein interactions for RNA: ENST00000553427.5

CPSF2-202, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 4

Gene CPSF2, Length 715 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-202ENST00000553427 C3P01024 1663 aa28.31■■■□□ 2.12
CPSF2-202ENST00000553427 KDM5DQ9BY66 1539 aa28.29■■■□□ 2.12
CPSF2-202ENST00000553427 CLTCQ00610 1675 aaKnown RBP28.29■■■□□ 2.12
CPSF2-202ENST00000553427 PTPRKQ15262 1439 aa28.28■■■□□ 2.12
CPSF2-202ENST00000553427 RRP7BPQ9NSQ0 103 aa28.28■■■□□ 2.12
CPSF2-202ENST00000553427 CHIC2Q9UKJ5 165 aa28.27■■■□□ 2.12
CPSF2-202ENST00000553427 ROCK1Q13464 1354 aa28.26■■■□□ 2.12
CPSF2-202ENST00000553427 ZMYM3Q14202 1370 aa28.26■■■□□ 2.12
CPSF2-202ENST00000553427 MROH1Q8NDA8 1641 aa28.25■■■□□ 2.11
CPSF2-202ENST00000553427 CEBPAP49715 358 aaPredicted RBP28.25■■■□□ 2.11
CPSF2-202ENST00000553427 NPATQ14207 1427 aa28.25■■■□□ 2.11
CPSF2-202ENST00000553427 LMTK3Q96Q04 1460 aa28.24■■■□□ 2.11
CPSF2-202ENST00000553427 PRDM15P57071 1507 aaPredicted RBP28.23■■■□□ 2.11
CPSF2-202ENST00000553427 ZC3H13Q5T200 1668 aaKnown RBP28.22■■■□□ 2.11
CPSF2-202ENST00000553427 DEPDC5O75140 1603 aa28.21■■■□□ 2.11
CPSF2-202ENST00000553427 PLPPR3Q6T4P5 718 aa28.2■■■□□ 2.1
CPSF2-202ENST00000553427 PREX1Q8TCU6 1659 aa28.19■■■□□ 2.1
CPSF2-202ENST00000553427 ABCC3O15438 1527 aa28.19■■■□□ 2.1
CPSF2-202ENST00000553427 SETD1BQ9UPS6 1966 aaKnown RBP28.19■■■□□ 2.1
CPSF2-202ENST00000553427 ANKRD50Q9ULJ7 1429 aa28.18■■■□□ 2.1
CPSF2-202ENST00000553427 WASHC2CQ9Y4E1 1318 aa28.18■■■□□ 2.1
CPSF2-202ENST00000553427 PZPP20742 1482 aa28.16■■■□□ 2.1
CPSF2-202ENST00000553427 UHRF1BP1Q6BDS2 1440 aa28.14■■■□□ 2.1
CPSF2-202ENST00000553427 VWDEQ8N2E2 1590 aa28.11■■■□□ 2.09
CPSF2-202ENST00000553427 LMTK2Q8IWU2 1503 aa28.08■■■□□ 2.09
CPSF2-202ENST00000553427 ITGAEP38570 1179 aa28.08■■■□□ 2.09
CPSF2-202ENST00000553427 KANK1Q14678 1352 aa28.08■■■□□ 2.09
CPSF2-202ENST00000553427 CAMSAP1Q5T5Y3 1602 aa28.07■■■□□ 2.08
CPSF2-202ENST00000553427 CEP152O94986 1710 aa28.06■■■□□ 2.08
CPSF2-202ENST00000553427 ARHGAP31Q2M1Z3 1444 aa28.06■■■□□ 2.08
CPSF2-202ENST00000553427 MYO3AQ8NEV4 1616 aa28.04■■■□□ 2.08
CPSF2-202ENST00000553427 UNC13BO14795 1591 aa28.03■■■□□ 2.08
CPSF2-202ENST00000553427 ZNF142P52746 1687 aaPredicted RBP28.02■■■□□ 2.08
CPSF2-202ENST00000553427 TNRQ92752 1358 aa28.01■■■□□ 2.07
CPSF2-202ENST00000553427 SPATA31D1Q6ZQQ2 1576 aa28.01■■■□□ 2.07
CPSF2-202ENST00000553427 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28■■■□□ 2.072e-7■□□□□ 8
CPSF2-202ENST00000553427 ERVK-7P63135 1459 aa27.99■■■□□ 2.07
CPSF2-202ENST00000553427 HSPA2P54652 639 aa27.98■■■□□ 2.07
CPSF2-202ENST00000553427 FBXO31Q5XUX0 539 aaPredicted RBP27.98■■■□□ 2.07
CPSF2-202ENST00000553427 CEP170BQ9Y4F5 1589 aaPredicted RBP27.98■■■□□ 2.07
CPSF2-202ENST00000553427 NAIPQ13075 1403 aa27.97■■■□□ 2.07
CPSF2-202ENST00000553427 EFCAB6Q5THR3 1501 aa27.97■■■□□ 2.07
CPSF2-202ENST00000553427 GCC2Q8IWJ2 1684 aa27.97■■■□□ 2.07
CPSF2-202ENST00000553427 HFM1A2PYH4 1435 aa27.96■■■□□ 2.07
CPSF2-202ENST00000553427 A2ML1A8K2U0 1454 aa27.95■■■□□ 2.07
CPSF2-202ENST00000553427 NLRP1Q9C000 1473 aa27.95■■■□□ 2.07
CPSF2-202ENST00000553427 IQGAP3Q86VI3 1631 aa27.91■■■□□ 2.06
CPSF2-202ENST00000553427 TET3O43151 1660 aa27.91■■■□□ 2.06
CPSF2-202ENST00000553427 RPRD2Q5VT52 1461 aaKnown RBP27.9■■■□□ 2.06
CPSF2-202ENST00000553427 PLA2R1Q13018 1463 aa27.88■■■□□ 2.05
CPSF2-202ENST00000553427 NUP155O75694 1391 aa27.85■■■□□ 2.05
CPSF2-202ENST00000553427 NOS1P29475 1434 aa27.84■■■□□ 2.05
CPSF2-202ENST00000553427 STRCQ7RTU9 1775 aa27.83■■■□□ 2.05
CPSF2-202ENST00000553427 UGGT1Q9NYU2 1555 aa27.8■■■□□ 2.04
CPSF2-202ENST00000553427 SYNMO15061 1565 aa27.78■■■□□ 2.04
CPSF2-202ENST00000553427 DMRT2Q9Y5R5 561 aa27.77■■■□□ 2.04
CPSF2-202ENST00000553427 CFAP65Q6ZU64 1925 aaKnown RBP27.77■■■□□ 2.04
CPSF2-202ENST00000553427 PTPRTO14522 1441 aa27.76■■■□□ 2.04
CPSF2-202ENST00000553427 E9PCH4 1651 aa27.76■■■□□ 2.03
CPSF2-202ENST00000553427 THEMISQ8N1K5 641 aaPredicted RBP27.75■■■□□ 2.03
CPSF2-202ENST00000553427 PKD2Q13563 968 aa27.74■■■□□ 2.03
CPSF2-202ENST00000553427 KDM5AP29375 1690 aaKnown RBP27.73■■■□□ 2.03
CPSF2-202ENST00000553427 UBR1Q8IWV7 1749 aa27.72■■■□□ 2.03
CPSF2-202ENST00000553427 SLC52A1Q9NWF4 448 aa27.71■■■□□ 2.03
CPSF2-202ENST00000553427 PIK3C2BO00750 1634 aa27.7■■■□□ 2.02
CPSF2-202ENST00000553427 ACIN1Q9UKV3 1341 aaKnown RBP27.68■■■□□ 2.02
CPSF2-202ENST00000553427 IDI1Q13907 227 aa27.66■■■□□ 2.02
CPSF2-202ENST00000553427 POLR1AO95602 1720 aaPredicted RBP27.66■■■□□ 2.02
CPSF2-202ENST00000553427 ADGRB3O60242 1522 aa27.66■■■□□ 2.02
CPSF2-202ENST00000553427 SLIT1O75093 1534 aa27.66■■■□□ 2.02
CPSF2-202ENST00000553427 SETD5Q9C0A6 1442 aa27.66■■■□□ 2.02
CPSF2-202ENST00000553427 NCKAP5LQ9HCH0 1330 aa27.66■■■□□ 2.02
CPSF2-202ENST00000553427 ARHGAP23Q9P227 1491 aa27.65■■■□□ 2.02
CPSF2-202ENST00000553427 NEURL4Q96JN8 1562 aa27.65■■■□□ 2.02
CPSF2-202ENST00000553427 MED14O60244 1454 aa27.63■■■□□ 2.01
CPSF2-202ENST00000553427 ANKLE2Q86XL3 938 aa27.62■■■□□ 2.01
CPSF2-202ENST00000553427 TRIM52Q96A61 297 aa27.61■■■□□ 2.01
CPSF2-202ENST00000553427 SPHKAPQ2M3C7 1700 aa27.59■■■□□ 2.01
CPSF2-202ENST00000553427 TMEM2Q9UHN6 1383 aa27.59■■■□□ 2.01
CPSF2-202ENST00000553427 SCAF11Q99590 1463 aaKnown RBP27.57■■■□□ 2
CPSF2-202ENST00000553427 TRPM2O94759 1503 aa27.57■■■□□ 2
CPSF2-202ENST00000553427 STAG3Q9UJ98 1225 aa27.56■■■□□ 2
CPSF2-202ENST00000553427 TMEM131LA2VDJ0 1609 aa27.56■■■□□ 2
CPSF2-202ENST00000553427 SLC4A1APQ9BWU0 796 aaKnown RBP27.55■■■□□ 2
CPSF2-202ENST00000553427 RAB3GAP2Q9H2M9 1393 aa27.55■■■□□ 2
CPSF2-202ENST00000553427 NPHP4O75161 1426 aaPredicted RBP27.55■■■□□ 2
CPSF2-202ENST00000553427 IQGAP1P46940 1657 aa27.51■■□□□ 1.99
CPSF2-202ENST00000553427 HRCP23327 699 aa27.5■■□□□ 1.99
CPSF2-202ENST00000553427 EID1Q9Y6B2 187 aa27.49■■□□□ 1.99
CPSF2-202ENST00000553427 ZFYVE9O95405 1425 aa27.49■■□□□ 1.99
CPSF2-202ENST00000553427 LTKP29376 864 aa27.48■■□□□ 1.99
CPSF2-202ENST00000553427 TXNDC2Q86VQ3 553 aa27.48■■□□□ 1.99
CPSF2-202ENST00000553427 LTBP4Q8N2S1 1624 aa27.47■■□□□ 1.99
CPSF2-202ENST00000553427 CLTCL1P53675 1640 aa27.46■■□□□ 1.99
CPSF2-202ENST00000553427 MPHOSPH9Q99550 1183 aa27.46■■□□□ 1.99
CPSF2-202ENST00000553427 MYO5BQ9ULV0 1848 aa27.45■■□□□ 1.98
CPSF2-202ENST00000553427 RIMS2Q9UQ26 1411 aa27.42■■□□□ 1.98
CPSF2-202ENST00000553427 HDGFP51858 240 aaKnown RBP27.4■■□□□ 1.98
CPSF2-202ENST00000553427 ZNF335Q9H4Z2 1342 aaPredicted RBP27.4■■□□□ 1.98
CPSF2-202ENST00000553427 CHGAP10645 457 aaKnown RBP27.38■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms