RNA–Protein interactions for RNA: ENST00000553384.5

RDH11-203, Transcript of retinol dehydrogenase 11, humanhuman

TSL 1 (best) BASIC

Gene RDH11, Length 1,926 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-203ENST00000553384 SUPT6HQ7KZ85 1726 aaKnown RBP11.1□□□□□ -0.63
RDH11-203ENST00000553384 CLTCQ00610 1675 aaKnown RBP11.1□□□□□ -0.63
RDH11-203ENST00000553384 HSPA1LP34931 641 aa11.09□□□□□ -0.63
RDH11-203ENST00000553384 INO80Q9ULG1 1556 aaPredicted RBP11.09□□□□□ -0.63
RDH11-203ENST00000553384 PPARGC1BQ86YN6 1023 aaKnown RBP11.08□□□□□ -0.64
RDH11-203ENST00000553384 CCNB3Q8WWL7 1395 aa11.07□□□□□ -0.64
RDH11-203ENST00000553384 RTEL1-TNFRSF6BF6WH68 1400 aa11.07□□□□□ -0.64
RDH11-203ENST00000553384 EHBP1L1Q8N3D4 1523 aa11.07□□□□□ -0.64
RDH11-203ENST00000553384 DNMT1P26358 1616 aaKnown RBP11.07□□□□□ -0.64
RDH11-203ENST00000553384 SHANK2Q9UPX8 1470 aa11.07□□□□□ -0.64
RDH11-203ENST00000553384 MED1Q15648 1581 aaPredicted RBP11.07□□□□□ -0.64
RDH11-203ENST00000553384 TIAM1Q13009 1591 aa11.06□□□□□ -0.64
RDH11-203ENST00000553384 PIP4K2BP78356 416 aa11.06□□□□□ -0.64
RDH11-203ENST00000553384 ANKLE2Q86XL3 938 aa11.06□□□□□ -0.64
RDH11-203ENST00000553384 SCAF1Q9H7N4 1312 aaKnown RBP11.06□□□□□ -0.64
RDH11-203ENST00000553384 DHX29Q7Z478 1369 aaKnown RBP11.06□□□□□ -0.64
RDH11-203ENST00000553384 THEMISQ8N1K5 641 aaPredicted RBP11.05□□□□□ -0.64
RDH11-203ENST00000553384 FAM135AQ9P2D6 1515 aa11.05□□□□□ -0.64
RDH11-203ENST00000553384 ADGBQ8N7X0 1667 aa11.05□□□□□ -0.64
RDH11-203ENST00000553384 TNRQ92752 1358 aa11.05□□□□□ -0.64
RDH11-203ENST00000553384 ZEB1P37275 1124 aaPredicted RBP11.03□□□□□ -0.64
RDH11-203ENST00000553384 RSPH4AQ5TD94 716 aa11.03□□□□□ -0.64
RDH11-203ENST00000553384 MBD5Q9P267 1494 aa11.03□□□□□ -0.64
RDH11-203ENST00000553384 MED14O60244 1454 aa11.03□□□□□ -0.64
RDH11-203ENST00000553384 PZPP20742 1482 aa11.03□□□□□ -0.64
RDH11-203ENST00000553384 NEURL4Q96JN8 1562 aa11.02□□□□□ -0.64
RDH11-203ENST00000553384 LRRC9Q6ZRR7 1453 aa11.02□□□□□ -0.65
RDH11-203ENST00000553384 NLRP1Q9C000 1473 aa11.02□□□□□ -0.65
RDH11-203ENST00000553384 FBXO31Q5XUX0 539 aaPredicted RBP11.01□□□□□ -0.65
RDH11-203ENST00000553384 MAP3K1Q13233 1512 aa11.01□□□□□ -0.65
RDH11-203ENST00000553384 MIA2Q96PC5 1412 aa11.01□□□□□ -0.65
RDH11-203ENST00000553384 POLR1AO95602 1720 aaPredicted RBP11.01□□□□□ -0.65
RDH11-203ENST00000553384 KIF3BO15066 747 aa11.01□□□□□ -0.65
RDH11-203ENST00000553384 KANK4Q5T7N3 995 aaPredicted RBP11.01□□□□□ -0.65
RDH11-203ENST00000553384 WASHC2CQ9Y4E1 1318 aa11.01□□□□□ -0.65
RDH11-203ENST00000553384 NCOA2Q15596 1464 aa11□□□□□ -0.65
RDH11-203ENST00000553384 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11□□□□□ -0.65
RDH11-203ENST00000553384 NPHP4O75161 1426 aaPredicted RBP11□□□□□ -0.65
RDH11-203ENST00000553384 KDM5DQ9BY66 1539 aa11□□□□□ -0.65
RDH11-203ENST00000553384 VWDEQ8N2E2 1590 aa11□□□□□ -0.65
RDH11-203ENST00000553384 ZNF644Q9H582 1327 aaPredicted RBP10.99□□□□□ -0.65
RDH11-203ENST00000553384 DEPDC5O75140 1603 aa10.99□□□□□ -0.65
RDH11-203ENST00000553384 UGGT1Q9NYU2 1555 aa10.98□□□□□ -0.65
RDH11-203ENST00000553384 ALKQ9UM73 1620 aa10.97□□□□□ -0.65
RDH11-203ENST00000553384 CCDC141Q6ZP82 1450 aa10.96□□□□□ -0.66
RDH11-203ENST00000553384 LRRC7Q96NW7 1537 aa10.94□□□□□ -0.66
RDH11-203ENST00000553384 TSPY4P0CV99 314 aa10.94□□□□□ -0.66
RDH11-203ENST00000553384 TSPY10P0CW01 314 aa10.94□□□□□ -0.66
RDH11-203ENST00000553384 IQGAP1P46940 1657 aa10.93□□□□□ -0.66
RDH11-203ENST00000553384 SYNMO15061 1565 aa10.92□□□□□ -0.66
RDH11-203ENST00000553384 MYOM3Q5VTT5 1437 aa10.92□□□□□ -0.66
RDH11-203ENST00000553384 RNF17Q9BXT8 1623 aaKnown RBP10.92□□□□□ -0.66
RDH11-203ENST00000553384 CAMSAP2Q08AD1 1489 aa10.92□□□□□ -0.66
RDH11-203ENST00000553384 RGS17Q9UGC6 210 aaPredicted RBP10.91□□□□□ -0.66
RDH11-203ENST00000553384 ARHGEF5Q12774 1597 aa10.89□□□□□ -0.67
RDH11-203ENST00000553384 FAM135BQ49AJ0 1406 aa10.89□□□□□ -0.67
RDH11-203ENST00000553384 ERVK-7P63135 1459 aa10.88□□□□□ -0.67
RDH11-203ENST00000553384 ABCC3O15438 1527 aa10.88□□□□□ -0.67
RDH11-203ENST00000553384 STRCP1A6NGW2 1772 aa10.88□□□□□ -0.67
RDH11-203ENST00000553384 ZC3H13Q5T200 1668 aaKnown RBP10.88□□□□□ -0.67
RDH11-203ENST00000553384 SCAF11Q99590 1463 aaKnown RBP10.88□□□□□ -0.67
RDH11-203ENST00000553384 ARHGAP23Q9P227 1491 aa10.87□□□□□ -0.67
RDH11-203ENST00000553384 TXNDC2Q86VQ3 553 aa10.86□□□□□ -0.67
RDH11-203ENST00000553384 EID1Q9Y6B2 187 aa10.86□□□□□ -0.67
RDH11-203ENST00000553384 SLIT1O75093 1534 aa10.86□□□□□ -0.67
RDH11-203ENST00000553384 FGD6Q6ZV73 1430 aa10.86□□□□□ -0.67
RDH11-203ENST00000553384 LTKP29376 864 aa10.86□□□□□ -0.67
RDH11-203ENST00000553384 FAM50AQ14320 339 aaKnown RBP10.85□□□□□ -0.67
RDH11-203ENST00000553384 MAST1Q9Y2H9 1570 aa10.85□□□□□ -0.67
RDH11-203ENST00000553384 PTPN23Q9H3S7 1636 aa10.85□□□□□ -0.67
RDH11-203ENST00000553384 EIF2AK4Q9P2K8 1649 aaKnown RBP10.85□□□□□ -0.67
RDH11-203ENST00000553384 ARHGAP31Q2M1Z3 1444 aa10.84□□□□□ -0.67
RDH11-203ENST00000553384 UBR1Q8IWV7 1749 aa10.83□□□□□ -0.68
RDH11-203ENST00000553384 CCER1Q8TC90 406 aaPredicted RBP10.83□□□□□ -0.68
RDH11-203ENST00000553384 KCNA6P17658 529 aa10.82□□□□□ -0.68
RDH11-203ENST00000553384 POTEAQ6S8J7 498 aa10.82□□□□□ -0.68
RDH11-203ENST00000553384 TMEM2Q9UHN6 1383 aa10.82□□□□□ -0.68
RDH11-203ENST00000553384 MROH1Q8NDA8 1641 aa10.81□□□□□ -0.68
RDH11-203ENST00000553384 DUOX2Q9NRD8 1548 aa10.8□□□□□ -0.68
RDH11-203ENST00000553384 TMEM94Q12767 1356 aa10.8□□□□□ -0.68
RDH11-203ENST00000553384 XIRP1Q702N8 1843 aaKnown RBP10.79□□□□□ -0.68
RDH11-203ENST00000553384 CHIC2Q9UKJ5 165 aa10.79□□□□□ -0.68
RDH11-203ENST00000553384 DAPK1P53355 1430 aa10.79□□□□□ -0.68
RDH11-203ENST00000553384 STAG3Q9UJ98 1225 aa10.78□□□□□ -0.68
RDH11-203ENST00000553384 ABCC5O15440 1437 aa10.78□□□□□ -0.68
RDH11-203ENST00000553384 PROSER2Q86WR7 435 aaPredicted RBP10.78□□□□□ -0.68
RDH11-203ENST00000553384 PRDM15P57071 1507 aaPredicted RBP10.77□□□□□ -0.69
RDH11-203ENST00000553384 ITGAEP38570 1179 aa10.77□□□□□ -0.69
RDH11-203ENST00000553384 RRP7BPQ9NSQ0 103 aa10.77□□□□□ -0.69
RDH11-203ENST00000553384 KDM5AP29375 1690 aaKnown RBP10.77□□□□□ -0.69
RDH11-203ENST00000553384 ERBINQ96RT1 1412 aa10.77□□□□□ -0.69
RDH11-203ENST00000553384 CFAP65Q6ZU64 1925 aaKnown RBP10.76□□□□□ -0.69
RDH11-203ENST00000553384 CEP152O94986 1710 aa10.76□□□□□ -0.69
RDH11-203ENST00000553384 KANK1Q14678 1352 aa10.76□□□□□ -0.69
RDH11-203ENST00000553384 ANKRD30AQ9BXX3 1397 aa10.76□□□□□ -0.69
RDH11-203ENST00000553384 CROCC2H7BZ55 1655 aa10.76□□□□□ -0.69
RDH11-203ENST00000553384 NKTRP30414 1462 aaKnown RBP10.76□□□□□ -0.69
RDH11-203ENST00000553384 IDI1Q13907 227 aa10.76□□□□□ -0.69
RDH11-203ENST00000553384 KIF15Q9NS87 1388 aa10.75□□□□□ -0.69
RDH11-203ENST00000553384 JCADQ9P266 1359 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms