RNA–Protein interactions for RNA: ENST00000553200.1

NR4A1-218, Transcript of nuclear receptor subfamily 4 group A member 1, humanhuman

TSL 3

Gene NR4A1, Length 521 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1-218ENST00000553200 ITGAEP38570 1179 aa36.83■■■■□ 3.49
NR4A1-218ENST00000553200 CEBPAP49715 358 aaPredicted RBP36.83■■■■□ 3.49
NR4A1-218ENST00000553200 MROH2AA6NES4 1674 aa36.83■■■■□ 3.49
NR4A1-218ENST00000553200 ERBINQ96RT1 1412 aa36.8■■■■□ 3.48
NR4A1-218ENST00000553200 CNTLNQ9NXG0 1405 aa36.8■■■■□ 3.48
NR4A1-218ENST00000553200 ESF1Q9H501 851 aaKnown RBP36.8■■■■□ 3.48
NR4A1-218ENST00000553200 MROH1Q8NDA8 1641 aa36.8■■■■□ 3.48
NR4A1-218ENST00000553200 PPP6R1Q9UPN7 881 aa36.73■■■■□ 3.47
NR4A1-218ENST00000553200 ROCK1Q13464 1354 aa36.72■■■■□ 3.47
NR4A1-218ENST00000553200 KDM5DQ9BY66 1539 aa36.72■■■■□ 3.47
NR4A1-218ENST00000553200 DEPDC5O75140 1603 aa36.71■■■■□ 3.47
NR4A1-218ENST00000553200 ZMYM3Q14202 1370 aa36.71■■■■□ 3.47
NR4A1-218ENST00000553200 FAM135AQ9P2D6 1515 aa36.69■■■■□ 3.46
NR4A1-218ENST00000553200 CEP152O94986 1710 aa36.68■■■■□ 3.46
NR4A1-218ENST00000553200 PRDM15P57071 1507 aaPredicted RBP36.67■■■■□ 3.46
NR4A1-218ENST00000553200 ANKRD50Q9ULJ7 1429 aa36.66■■■■□ 3.46
NR4A1-218ENST00000553200 ABCC3O15438 1527 aa36.65■■■■□ 3.46
NR4A1-218ENST00000553200 ZC3H13Q5T200 1668 aaKnown RBP36.64■■■■□ 3.46
NR4A1-218ENST00000553200 WASHC2CQ9Y4E1 1318 aa36.64■■■■□ 3.46
NR4A1-218ENST00000553200 SETD1BQ9UPS6 1966 aaKnown RBP36.62■■■■□ 3.45
NR4A1-218ENST00000553200 PREX1Q8TCU6 1659 aa36.61■■■■□ 3.45
NR4A1-218ENST00000553200 LMTK3Q96Q04 1460 aa36.6■■■■□ 3.45
NR4A1-218ENST00000553200 GRWD1Q9BQ67 446 aaKnown RBP eCLIP36.57■■■■□ 3.44
NR4A1-218ENST00000553200 CAMSAP1Q5T5Y3 1602 aa36.56■■■■□ 3.44
NR4A1-218ENST00000553200 VWDEQ8N2E2 1590 aa36.55■■■■□ 3.44
NR4A1-218ENST00000553200 NPATQ14207 1427 aa36.53■■■■□ 3.44
NR4A1-218ENST00000553200 PZPP20742 1482 aa36.53■■■■□ 3.44
NR4A1-218ENST00000553200 GCC2Q8IWJ2 1684 aa36.51■■■■□ 3.44
NR4A1-218ENST00000553200 UNC13BO14795 1591 aa36.51■■■■□ 3.44
NR4A1-218ENST00000553200 CFAP65Q6ZU64 1925 aaKnown RBP36.5■■■■□ 3.43
NR4A1-218ENST00000553200 FBXO31Q5XUX0 539 aaPredicted RBP36.48■■■■□ 3.43
NR4A1-218ENST00000553200 NAIPQ13075 1403 aa36.47■■■■□ 3.43
NR4A1-218ENST00000553200 KANK1Q14678 1352 aa36.46■■■■□ 3.43
NR4A1-218ENST00000553200 UHRF1BP1Q6BDS2 1440 aa36.45■■■■□ 3.43
NR4A1-218ENST00000553200 MYO3AQ8NEV4 1616 aa36.45■■■■□ 3.42
NR4A1-218ENST00000553200 LMTK2Q8IWU2 1503 aa36.44■■■■□ 3.42
NR4A1-218ENST00000553200 HSPA2P54652 639 aa36.42■■■■□ 3.42
NR4A1-218ENST00000553200 HFM1A2PYH4 1435 aa36.41■■■■□ 3.42
NR4A1-218ENST00000553200 SPATA31D1Q6ZQQ2 1576 aa36.37■■■■□ 3.41
NR4A1-218ENST00000553200 ARHGAP31Q2M1Z3 1444 aa36.37■■■■□ 3.41
NR4A1-218ENST00000553200 ZNF142P52746 1687 aaPredicted RBP36.37■■■■□ 3.41
NR4A1-218ENST00000553200 ERVK-7P63135 1459 aa36.37■■■■□ 3.41
NR4A1-218ENST00000553200 EFCAB6Q5THR3 1501 aa36.36■■■■□ 3.41
NR4A1-218ENST00000553200 IQGAP3Q86VI3 1631 aa36.36■■■■□ 3.41
NR4A1-218ENST00000553200 TNRQ92752 1358 aa36.36■■■■□ 3.41
NR4A1-218ENST00000553200 TET3O43151 1660 aa36.34■■■■□ 3.41
NR4A1-218ENST00000553200 CEP170BQ9Y4F5 1589 aaPredicted RBP36.32■■■■□ 3.41
NR4A1-218ENST00000553200 NUP155O75694 1391 aa36.28■■■■□ 3.4
NR4A1-218ENST00000553200 E9PCH4 1651 aa36.25■■■■□ 3.39
NR4A1-218ENST00000553200 A2ML1A8K2U0 1454 aa36.24■■■■□ 3.39
NR4A1-218ENST00000553200 STRCQ7RTU9 1775 aa36.22■■■■□ 3.39
NR4A1-218ENST00000553200 SYNMO15061 1565 aa36.2■■■■□ 3.39
NR4A1-218ENST00000553200 NLRP1Q9C000 1473 aa36.2■■■■□ 3.39
NR4A1-218ENST00000553200 RPRD2Q5VT52 1461 aaKnown RBP36.18■■■■□ 3.38
NR4A1-218ENST00000553200 NOS1P29475 1434 aa36.17■■■■□ 3.38
NR4A1-218ENST00000553200 UGGT1Q9NYU2 1555 aa36.11■■■■□ 3.37
NR4A1-218ENST00000553200 UBR1Q8IWV7 1749 aa36.11■■■■□ 3.37
NR4A1-218ENST00000553200 SETD5Q9C0A6 1442 aa36.1■■■■□ 3.37
NR4A1-218ENST00000553200 PIK3C2BO00750 1634 aa36.1■■■■□ 3.37
NR4A1-218ENST00000553200 TRIM52Q96A61 297 aa36.09■■■■□ 3.37
NR4A1-218ENST00000553200 PLA2R1Q13018 1463 aa36.05■■■■□ 3.36
NR4A1-218ENST00000553200 IDI1Q13907 227 aa36.02■■■■□ 3.36
NR4A1-218ENST00000553200 SPHKAPQ2M3C7 1700 aa36.02■■■■□ 3.36
NR4A1-218ENST00000553200 RAB3GAP2Q9H2M9 1393 aa36.01■■■■□ 3.35
NR4A1-218ENST00000553200 NCKAP5LQ9HCH0 1330 aa36■■■■□ 3.35
NR4A1-218ENST00000553200 POLR1AO95602 1720 aaPredicted RBP36■■■■□ 3.35
NR4A1-218ENST00000553200 MYO5BQ9ULV0 1848 aa35.98■■■■□ 3.35
NR4A1-218ENST00000553200 THEMISQ8N1K5 641 aaPredicted RBP35.97■■■■□ 3.35
NR4A1-218ENST00000553200 KDM5AP29375 1690 aaKnown RBP35.97■■■■□ 3.35
NR4A1-218ENST00000553200 SLC4A1APQ9BWU0 796 aaKnown RBP35.94■■■■□ 3.34
NR4A1-218ENST00000553200 SLC52A1Q9NWF4 448 aa35.94■■■■□ 3.34
NR4A1-218ENST00000553200 ADGRB3O60242 1522 aa35.93■■■■□ 3.34
NR4A1-218ENST00000553200 PTPRTO14522 1441 aa35.93■■■■□ 3.34
NR4A1-218ENST00000553200 PKD2Q13563 968 aa35.93■■■■□ 3.34
NR4A1-218ENST00000553200 NEURL4Q96JN8 1562 aa35.93■■■■□ 3.34
NR4A1-218ENST00000553200 TMEM131LA2VDJ0 1609 aa35.88■■■■□ 3.33
NR4A1-218ENST00000553200 ARHGAP23Q9P227 1491 aa35.87■■■■□ 3.33
NR4A1-218ENST00000553200 SLIT1O75093 1534 aa35.87■■■■□ 3.33
NR4A1-218ENST00000553200 STAG3Q9UJ98 1225 aa35.86■■■■□ 3.33
NR4A1-218ENST00000553200 TRPM2O94759 1503 aa35.85■■■■□ 3.33
NR4A1-218ENST00000553200 MPHOSPH9Q99550 1183 aa35.85■■■■□ 3.33
NR4A1-218ENST00000553200 DMRT2Q9Y5R5 561 aa35.85■■■■□ 3.33
NR4A1-218ENST00000553200 CLTCL1P53675 1640 aa35.85■■■■□ 3.33
NR4A1-218ENST00000553200 FOXD1Q16676 465 aa35.84■■■■□ 3.33
NR4A1-218ENST00000553200 ANKLE2Q86XL3 938 aa35.83■■■■□ 3.33
NR4A1-218ENST00000553200 TMEM2Q9UHN6 1383 aa35.8■■■■□ 3.32
NR4A1-218ENST00000553200 LTKP29376 864 aa35.78■■■■□ 3.32
NR4A1-218ENST00000553200 MED14O60244 1454 aa35.78■■■■□ 3.32
NR4A1-218ENST00000553200 SCAF11Q99590 1463 aaKnown RBP35.77■■■■□ 3.32
NR4A1-218ENST00000553200 IQGAP1P46940 1657 aa35.77■■■■□ 3.32
NR4A1-218ENST00000553200 ACIN1Q9UKV3 1341 aaKnown RBP35.77■■■■□ 3.32
NR4A1-218ENST00000553200 CHGAP10645 457 aaKnown RBP35.76■■■■□ 3.32
NR4A1-218ENST00000553200 NPHP4O75161 1426 aaPredicted RBP35.74■■■■□ 3.31
NR4A1-218ENST00000553200 HRCP23327 699 aa35.74■■■■□ 3.31
NR4A1-218ENST00000553200 TXNDC2Q86VQ3 553 aa35.73■■■■□ 3.31
NR4A1-218ENST00000553200 KIF1BO60333 1816 aa35.73■■■■□ 3.31
NR4A1-218ENST00000553200 ZFYVE9O95405 1425 aa35.71■■■■□ 3.31
NR4A1-218ENST00000553200 TRIM26Q12899 539 aaPredicted RBP35.68■■■■□ 3.3
NR4A1-218ENST00000553200 RIMS2Q9UQ26 1411 aa35.67■■■■□ 3.3
NR4A1-218ENST00000553200 EID1Q9Y6B2 187 aa35.67■■■■□ 3.3
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms