RNA–Protein interactions for RNA: ENST00000552890.5

TRAFD1-208, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 1,043 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-208ENST00000552890 FER1L4A9Z1Z3 1794 aa15.47■□□□□ 0.07
TRAFD1-208ENST00000552890 MADDQ8WXG6 1647 aa15.46■□□□□ 0.06
TRAFD1-208ENST00000552890 ANKRD50Q9ULJ7 1429 aa15.45■□□□□ 0.06
TRAFD1-208ENST00000552890 SETD1BQ9UPS6 1966 aaKnown RBP15.44■□□□□ 0.06
TRAFD1-208ENST00000552890 MROH2AA6NES4 1674 aa15.44■□□□□ 0.06
TRAFD1-208ENST00000552890 ITGAEP38570 1179 aa15.43■□□□□ 0.06
TRAFD1-208ENST00000552890 KDM5DQ9BY66 1539 aa15.43■□□□□ 0.06
TRAFD1-208ENST00000552890 NPATQ14207 1427 aa15.43■□□□□ 0.06
TRAFD1-208ENST00000552890 ZMYM3Q14202 1370 aa15.42■□□□□ 0.06
TRAFD1-208ENST00000552890 RNF17Q9BXT8 1623 aaKnown RBP15.42■□□□□ 0.06
TRAFD1-208ENST00000552890 RIMS1Q86UR5 1692 aaKnown RBP15.41■□□□□ 0.06
TRAFD1-208ENST00000552890 ZC3H13Q5T200 1668 aaKnown RBP15.41■□□□□ 0.06
TRAFD1-208ENST00000552890 SIGLEC1Q9BZZ2 1709 aa15.4■□□□□ 0.06
TRAFD1-208ENST00000552890 PRDM15P57071 1507 aaPredicted RBP15.37■□□□□ 0.05
TRAFD1-208ENST00000552890 HFM1A2PYH4 1435 aa15.36■□□□□ 0.05
TRAFD1-208ENST00000552890 PTPRKQ15262 1439 aa15.35■□□□□ 0.05
TRAFD1-208ENST00000552890 ARHGAP31Q2M1Z3 1444 aa15.35■□□□□ 0.05
TRAFD1-208ENST00000552890 UHRF1BP1Q6BDS2 1440 aa15.35■□□□□ 0.05
TRAFD1-208ENST00000552890 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.35■□□□□ 0.055e-6■■■□□ 14.8
TRAFD1-208ENST00000552890 DEPDC5O75140 1603 aa15.35■□□□□ 0.05
TRAFD1-208ENST00000552890 PZPP20742 1482 aa15.34■□□□□ 0.05
TRAFD1-208ENST00000552890 CLTCQ00610 1675 aaKnown RBP15.33■□□□□ 0.04
TRAFD1-208ENST00000552890 ABCC3O15438 1527 aa15.33■□□□□ 0.04
TRAFD1-208ENST00000552890 LMTK2Q8IWU2 1503 aa15.33■□□□□ 0.04
TRAFD1-208ENST00000552890 RPRD2Q5VT52 1461 aaKnown RBP15.32■□□□□ 0.04
TRAFD1-208ENST00000552890 C3P01024 1663 aa15.32■□□□□ 0.04
TRAFD1-208ENST00000552890 CEBPAP49715 358 aaPredicted RBP15.31■□□□□ 0.04
TRAFD1-208ENST00000552890 PLPPR3Q6T4P5 718 aa15.31■□□□□ 0.04
TRAFD1-208ENST00000552890 NAIPQ13075 1403 aa15.31■□□□□ 0.04
TRAFD1-208ENST00000552890 NUP155O75694 1391 aa15.3■□□□□ 0.04
TRAFD1-208ENST00000552890 HRCP23327 699 aa15.3■□□□□ 0.04
TRAFD1-208ENST00000552890 DMRT2Q9Y5R5 561 aa15.3■□□□□ 0.04
TRAFD1-208ENST00000552890 PREX1Q8TCU6 1659 aa15.29■□□□□ 0.04
TRAFD1-208ENST00000552890 NLRP1Q9C000 1473 aa15.29■□□□□ 0.04
TRAFD1-208ENST00000552890 TNRQ92752 1358 aa15.29■□□□□ 0.04
TRAFD1-208ENST00000552890 SLC52A1Q9NWF4 448 aa15.28■□□□□ 0.04
TRAFD1-208ENST00000552890 GCC2Q8IWJ2 1684 aa15.28■□□□□ 0.04
TRAFD1-208ENST00000552890 UNC13BO14795 1591 aa15.28■□□□□ 0.04
TRAFD1-208ENST00000552890 VWDEQ8N2E2 1590 aa15.28■□□□□ 0.04
TRAFD1-208ENST00000552890 THEMISQ8N1K5 641 aaPredicted RBP15.27■□□□□ 0.04
TRAFD1-208ENST00000552890 MROH1Q8NDA8 1641 aa15.27■□□□□ 0.03
TRAFD1-208ENST00000552890 CAMSAP1Q5T5Y3 1602 aa15.25■□□□□ 0.03
TRAFD1-208ENST00000552890 TRIM52Q96A61 297 aa15.25■□□□□ 0.03
TRAFD1-208ENST00000552890 SETD5Q9C0A6 1442 aa15.25■□□□□ 0.03
TRAFD1-208ENST00000552890 EFCAB6Q5THR3 1501 aa15.23■□□□□ 0.03
TRAFD1-208ENST00000552890 TET3O43151 1660 aa15.23■□□□□ 0.03
TRAFD1-208ENST00000552890 A2ML1A8K2U0 1454 aa15.23■□□□□ 0.03
TRAFD1-208ENST00000552890 HDGFP51858 240 aaKnown RBP15.23■□□□□ 0.03
TRAFD1-208ENST00000552890 IQGAP3Q86VI3 1631 aa15.23■□□□□ 0.03
TRAFD1-208ENST00000552890 SPATA31D1Q6ZQQ2 1576 aa15.23■□□□□ 0.03
TRAFD1-208ENST00000552890 ERVK-7P63135 1459 aa15.22■□□□□ 0.03
TRAFD1-208ENST00000552890 LMTK3Q96Q04 1460 aa15.22■□□□□ 0.03
TRAFD1-208ENST00000552890 CEP152O94986 1710 aa15.21■□□□□ 0.03
TRAFD1-208ENST00000552890 PKD2Q13563 968 aa15.21■□□□□ 0.03
TRAFD1-208ENST00000552890 STAG3Q9UJ98 1225 aa15.21■□□□□ 0.03
TRAFD1-208ENST00000552890 FBXO31Q5XUX0 539 aaPredicted RBP15.2■□□□□ 0.02
TRAFD1-208ENST00000552890 SLC4A1APQ9BWU0 796 aaKnown RBP15.2■□□□□ 0.02
TRAFD1-208ENST00000552890 TRIM26Q12899 539 aaPredicted RBP15.19■□□□□ 0.02
TRAFD1-208ENST00000552890 PLA2R1Q13018 1463 aa15.18■□□□□ 0.02
TRAFD1-208ENST00000552890 CEP170BQ9Y4F5 1589 aaPredicted RBP15.18■□□□□ 0.02
TRAFD1-208ENST00000552890 ZNF142P52746 1687 aaPredicted RBP15.18■□□□□ 0.02
TRAFD1-208ENST00000552890 NOS1P29475 1434 aa15.17■□□□□ 0.02
TRAFD1-208ENST00000552890 ANKLE2Q86XL3 938 aa15.17■□□□□ 0.02
TRAFD1-208ENST00000552890 EID1Q9Y6B2 187 aa15.17■□□□□ 0.02
TRAFD1-208ENST00000552890 MYO3AQ8NEV4 1616 aa15.17■□□□□ 0.02
TRAFD1-208ENST00000552890 UGGT1Q9NYU2 1555 aa15.15■□□□□ 0.02
TRAFD1-208ENST00000552890 KDM5AP29375 1690 aaKnown RBP15.15■□□□□ 0.02
TRAFD1-208ENST00000552890 RAB3GAP2Q9H2M9 1393 aa15.13■□□□□ 0.01
TRAFD1-208ENST00000552890 HSPA2P54652 639 aa15.12■□□□□ 0.01
TRAFD1-208ENST00000552890 IDI1Q13907 227 aa15.12■□□□□ 0.01
TRAFD1-208ENST00000552890 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.12■□□□□ 0.01
TRAFD1-208ENST00000552890 MPHOSPH9Q99550 1183 aa15.12■□□□□ 0.01
TRAFD1-208ENST00000552890 CFAP65Q6ZU64 1925 aaKnown RBP15.11■□□□□ 0.01
TRAFD1-208ENST00000552890 PTPRTO14522 1441 aa15.11■□□□□ 0.01
TRAFD1-208ENST00000552890 E9PCH4 1651 aa15.09■□□□□ 0.01
TRAFD1-208ENST00000552890 TMEM2Q9UHN6 1383 aa15.06■□□□□ 0
TRAFD1-208ENST00000552890 SLIT1O75093 1534 aa15.06■□□□□ 0
TRAFD1-208ENST00000552890 TRPM2O94759 1503 aa15.06■□□□□ 0
TRAFD1-208ENST00000552890 CHGAP10645 457 aaKnown RBP15.05■□□□□ -0
TRAFD1-208ENST00000552890 TXNDC2Q86VQ3 553 aa15.05■□□□□ -0
TRAFD1-208ENST00000552890 RPGRIP1LQ68CZ1 1315 aa15.05■□□□□ -0
TRAFD1-208ENST00000552890 CCDC144AA2RUR9 1427 aa15.05■□□□□ -0
TRAFD1-208ENST00000552890 ADGRB3O60242 1522 aa15.05■□□□□ -0
TRAFD1-208ENST00000552890 SYNMO15061 1565 aa15.05■□□□□ -0
TRAFD1-208ENST00000552890 SPHKAPQ2M3C7 1700 aa15.05■□□□□ -0
TRAFD1-208ENST00000552890 MED14O60244 1454 aa15.04■□□□□ -0
TRAFD1-208ENST00000552890 PPP1R15AO75807 674 aaPredicted RBP15.04■□□□□ -0
TRAFD1-208ENST00000552890 UBR1Q8IWV7 1749 aa15.03■□□□□ -0
TRAFD1-208ENST00000552890 PIK3C2BO00750 1634 aa15.03■□□□□ -0
TRAFD1-208ENST00000552890 SCAF11Q99590 1463 aaKnown RBP15.03■□□□□ -0
TRAFD1-208ENST00000552890 ARHGAP23Q9P227 1491 aa15.03■□□□□ -0
TRAFD1-208ENST00000552890 STAC3Q96MF2 364 aa15.03■□□□□ -0
TRAFD1-208ENST00000552890 NCKAP5LQ9HCH0 1330 aa15.01□□□□□ -0.01
TRAFD1-208ENST00000552890 VGFO15240 615 aaPredicted RBP15.01□□□□□ -0.01
TRAFD1-208ENST00000552890 ZNF326Q5BKZ1 582 aaKnown RBP15.01□□□□□ -0.01
TRAFD1-208ENST00000552890 POLR1AO95602 1720 aaPredicted RBP15□□□□□ -0.01
TRAFD1-208ENST00000552890 NPHP4O75161 1426 aaPredicted RBP15□□□□□ -0.01
TRAFD1-208ENST00000552890 STRCQ7RTU9 1775 aa14.99□□□□□ -0.01
TRAFD1-208ENST00000552890 BCANQ96GW7 911 aa14.98□□□□□ -0.01
TRAFD1-208ENST00000552890 KIF1BO60333 1816 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms