RNA–Protein interactions for RNA: ENST00000551912.1

DDX54-209, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-209ENST00000551912 ANKRD50Q9ULJ7 1429 aa28.23■■■□□ 2.11
DDX54-209ENST00000551912 PTPRMP28827 1452 aa28.22■■■□□ 2.11
DDX54-209ENST00000551912 RNF17Q9BXT8 1623 aaKnown RBP28.21■■■□□ 2.11
DDX54-209ENST00000551912 CNTLNQ9NXG0 1405 aa28.21■■■□□ 2.11
DDX54-209ENST00000551912 FAM135AQ9P2D6 1515 aa28.15■■■□□ 2.1
DDX54-209ENST00000551912 WASHC2CQ9Y4E1 1318 aa28.15■■■□□ 2.1
DDX54-209ENST00000551912 MROH1Q8NDA8 1641 aa28.14■■■□□ 2.09
DDX54-209ENST00000551912 CLTCQ00610 1675 aaKnown RBP28.13■■■□□ 2.09
DDX54-209ENST00000551912 KDM5DQ9BY66 1539 aa28.13■■■□□ 2.09
DDX54-209ENST00000551912 NAIPQ13075 1403 aa28.12■■■□□ 2.09
DDX54-209ENST00000551912 DEPDC5O75140 1603 aa28.12■■■□□ 2.09
DDX54-209ENST00000551912 PLPPR3Q6T4P5 718 aa28.12■■■□□ 2.09
DDX54-209ENST00000551912 PRDM15P57071 1507 aaPredicted RBP28.12■■■□□ 2.09
DDX54-209ENST00000551912 HFM1A2PYH4 1435 aa28.11■■■□□ 2.09
DDX54-209ENST00000551912 MROH2AA6NES4 1674 aa28.11■■■□□ 2.09
DDX54-209ENST00000551912 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.11■■■□□ 2.093e-7■■■□□ 14.8
DDX54-209ENST00000551912 ZMYM3Q14202 1370 aa28.1■■■□□ 2.09
DDX54-209ENST00000551912 CEBPAP49715 358 aaPredicted RBP28.09■■■□□ 2.09
DDX54-209ENST00000551912 KANK1Q14678 1352 aa28.09■■■□□ 2.09
DDX54-209ENST00000551912 GCC2Q8IWJ2 1684 aa28.08■■■□□ 2.09
DDX54-209ENST00000551912 ABCC3O15438 1527 aa28.07■■■□□ 2.08
DDX54-209ENST00000551912 C3P01024 1663 aa28.07■■■□□ 2.08
DDX54-209ENST00000551912 ZC3H13Q5T200 1668 aaKnown RBP28.07■■■□□ 2.08
DDX54-209ENST00000551912 UNC13BO14795 1591 aa28.03■■■□□ 2.08
DDX54-209ENST00000551912 CEP152O94986 1710 aa28.01■■■□□ 2.07
DDX54-209ENST00000551912 VWDEQ8N2E2 1590 aa28.01■■■□□ 2.07
DDX54-209ENST00000551912 LMTK2Q8IWU2 1503 aa27.97■■■□□ 2.07
DDX54-209ENST00000551912 PZPP20742 1482 aa27.97■■■□□ 2.07
DDX54-209ENST00000551912 CAMSAP1Q5T5Y3 1602 aa27.96■■■□□ 2.07
DDX54-209ENST00000551912 NPATQ14207 1427 aa27.96■■■□□ 2.07
DDX54-209ENST00000551912 NUP155O75694 1391 aa27.96■■■□□ 2.07
DDX54-209ENST00000551912 ARHGAP31Q2M1Z3 1444 aa27.92■■■□□ 2.06
DDX54-209ENST00000551912 SETD5Q9C0A6 1442 aa27.92■■■□□ 2.06
DDX54-209ENST00000551912 SETD1BQ9UPS6 1966 aaKnown RBP27.92■■■□□ 2.06
DDX54-209ENST00000551912 FBXO31Q5XUX0 539 aaPredicted RBP27.91■■■□□ 2.06
DDX54-209ENST00000551912 IQGAP3Q86VI3 1631 aa27.91■■■□□ 2.06
DDX54-209ENST00000551912 EFCAB6Q5THR3 1501 aa27.89■■■□□ 2.06
DDX54-209ENST00000551912 TRIM52Q96A61 297 aa27.88■■■□□ 2.05
DDX54-209ENST00000551912 TET3O43151 1660 aa27.87■■■□□ 2.05
DDX54-209ENST00000551912 TRIM26Q12899 539 aaPredicted RBP27.86■■■□□ 2.05
DDX54-209ENST00000551912 PREX1Q8TCU6 1659 aa27.86■■■□□ 2.05
DDX54-209ENST00000551912 TNRQ92752 1358 aa27.85■■■□□ 2.05
DDX54-209ENST00000551912 UHRF1BP1Q6BDS2 1440 aa27.84■■■□□ 2.05
DDX54-209ENST00000551912 ERVK-7P63135 1459 aa27.84■■■□□ 2.05
DDX54-209ENST00000551912 ACIN1Q9UKV3 1341 aaKnown RBP27.84■■■□□ 2.05
DDX54-209ENST00000551912 RAB3GAP2Q9H2M9 1393 aa27.84■■■□□ 2.05
DDX54-209ENST00000551912 SPATA31D1Q6ZQQ2 1576 aa27.83■■■□□ 2.05
DDX54-209ENST00000551912 RPRD2Q5VT52 1461 aaKnown RBP27.83■■■□□ 2.04
DDX54-209ENST00000551912 CFAP65Q6ZU64 1925 aaKnown RBP27.82■■■□□ 2.04
DDX54-209ENST00000551912 LMTK3Q96Q04 1460 aa27.82■■■□□ 2.04
DDX54-209ENST00000551912 MYO3AQ8NEV4 1616 aa27.78■■■□□ 2.04
DDX54-209ENST00000551912 E9PCH4 1651 aa27.76■■■□□ 2.03
DDX54-209ENST00000551912 SLC4A1APQ9BWU0 796 aaKnown RBP27.75■■■□□ 2.03
DDX54-209ENST00000551912 NLRP1Q9C000 1473 aa27.75■■■□□ 2.03
DDX54-209ENST00000551912 NOS1P29475 1434 aa27.75■■■□□ 2.03
DDX54-209ENST00000551912 HRCP23327 699 aa27.74■■■□□ 2.03
DDX54-209ENST00000551912 CEP170BQ9Y4F5 1589 aaPredicted RBP27.73■■■□□ 2.03
DDX54-209ENST00000551912 A2ML1A8K2U0 1454 aa27.71■■■□□ 2.03
DDX54-209ENST00000551912 ZNF142P52746 1687 aaPredicted RBP27.71■■■□□ 2.03
DDX54-209ENST00000551912 HSPA2P54652 639 aa27.7■■■□□ 2.02
DDX54-209ENST00000551912 PKD2Q13563 968 aa27.7■■■□□ 2.02
DDX54-209ENST00000551912 SYNMO15061 1565 aa27.69■■■□□ 2.02
DDX54-209ENST00000551912 MPHOSPH9Q99550 1183 aa27.68■■■□□ 2.02
DDX54-209ENST00000551912 SLC52A1Q9NWF4 448 aa27.66■■■□□ 2.02
DDX54-209ENST00000551912 IDI1Q13907 227 aa27.63■■■□□ 2.01
DDX54-209ENST00000551912 UGGT1Q9NYU2 1555 aa27.63■■■□□ 2.01
DDX54-209ENST00000551912 PTPRTO14522 1441 aa27.62■■■□□ 2.01
DDX54-209ENST00000551912 SPHKAPQ2M3C7 1700 aa27.61■■■□□ 2.01
DDX54-209ENST00000551912 THEMISQ8N1K5 641 aaPredicted RBP27.6■■■□□ 2.01
DDX54-209ENST00000551912 PIK3C2BO00750 1634 aa27.59■■■□□ 2.01
DDX54-209ENST00000551912 FOXD1Q16676 465 aa27.58■■■□□ 2.01
DDX54-209ENST00000551912 STAG3Q9UJ98 1225 aa27.58■■■□□ 2.01
DDX54-209ENST00000551912 UBR1Q8IWV7 1749 aa27.56■■■□□ 2
DDX54-209ENST00000551912 TRPM2O94759 1503 aa27.56■■■□□ 2
DDX54-209ENST00000551912 PLA2R1Q13018 1463 aa27.55■■■□□ 2
DDX54-209ENST00000551912 KDM5AP29375 1690 aaKnown RBP27.53■■■□□ 2
DDX54-209ENST00000551912 ADGRB3O60242 1522 aa27.52■■■□□ 2
DDX54-209ENST00000551912 CHGAP10645 457 aaKnown RBP27.49■■□□□ 1.99
DDX54-209ENST00000551912 PCGF6Q9BYE7 350 aa27.49■■□□□ 1.99
DDX54-209ENST00000551912 CLTCL1P53675 1640 aa27.49■■□□□ 1.99
DDX54-209ENST00000551912 STRCQ7RTU9 1775 aa27.48■■□□□ 1.99
DDX54-209ENST00000551912 TMEM131LA2VDJ0 1609 aa27.47■■□□□ 1.99
DDX54-209ENST00000551912 ANKLE2Q86XL3 938 aa27.46■■□□□ 1.99
DDX54-209ENST00000551912 NCKAP5LQ9HCH0 1330 aa27.45■■□□□ 1.99
DDX54-209ENST00000551912 SLIT1O75093 1534 aa27.45■■□□□ 1.98
DDX54-209ENST00000551912 TMEM2Q9UHN6 1383 aa27.45■■□□□ 1.98
DDX54-209ENST00000551912 ARHGAP23Q9P227 1491 aa27.44■■□□□ 1.98
DDX54-209ENST00000551912 CCDC144AA2RUR9 1427 aa27.44■■□□□ 1.98
DDX54-209ENST00000551912 DMRT2Q9Y5R5 561 aa27.43■■□□□ 1.98
DDX54-209ENST00000551912 MYO5BQ9ULV0 1848 aa27.42■■□□□ 1.98
DDX54-209ENST00000551912 EID1Q9Y6B2 187 aa27.41■■□□□ 1.98
DDX54-209ENST00000551912 POLR1AO95602 1720 aaPredicted RBP27.4■■□□□ 1.98
DDX54-209ENST00000551912 KIF1BO60333 1816 aa27.39■■□□□ 1.98
DDX54-209ENST00000551912 ANKRD30BQ9BXX2 1392 aa27.39■■□□□ 1.98
DDX54-209ENST00000551912 TXNDC2Q86VQ3 553 aa27.39■■□□□ 1.98
DDX54-209ENST00000551912 SCAF11Q99590 1463 aaKnown RBP27.38■■□□□ 1.97
DDX54-209ENST00000551912 LTKP29376 864 aa27.37■■□□□ 1.97
DDX54-209ENST00000551912 HDGFP51858 240 aaKnown RBP27.36■■□□□ 1.97
DDX54-209ENST00000551912 ZNF326Q5BKZ1 582 aaKnown RBP27.36■■□□□ 1.97
DDX54-209ENST00000551912 NEURL4Q96JN8 1562 aa27.35■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms