RNA–Protein interactions for RNA: ENST00000551293.1

RPAP3-207, Transcript of RNA polymerase II associated protein 3, humanhuman

TSL 1 (best)

Gene RPAP3, Length 621 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP3-207ENST00000551293 TNRQ92752 1358 aa29.96■■■□□ 2.39
RPAP3-207ENST00000551293 HSPA1LP34931 641 aa29.96■■■□□ 2.39
RPAP3-207ENST00000551293 EHBP1L1Q8N3D4 1523 aa29.94■■■□□ 2.38
RPAP3-207ENST00000551293 RTEL1-TNFRSF6BF6WH68 1400 aa29.94■■■□□ 2.38
RPAP3-207ENST00000551293 WASHC2CQ9Y4E1 1318 aa29.91■■■□□ 2.38
RPAP3-207ENST00000551293 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.9■■■□□ 2.38
RPAP3-207ENST00000551293 NEURL4Q96JN8 1562 aa29.9■■■□□ 2.38
RPAP3-207ENST00000551293 CEP162Q5TB80 1403 aa29.89■■■□□ 2.38
RPAP3-207ENST00000551293 SHANK2Q9UPX8 1470 aa29.87■■■□□ 2.37
RPAP3-207ENST00000551293 POLR1AO95602 1720 aaPredicted RBP29.87■■■□□ 2.37
RPAP3-207ENST00000551293 PZPP20742 1482 aa29.87■■■□□ 2.37
RPAP3-207ENST00000551293 CCDC141Q6ZP82 1450 aa29.87■■■□□ 2.37
RPAP3-207ENST00000551293 KDM5DQ9BY66 1539 aa29.86■■■□□ 2.37
RPAP3-207ENST00000551293 TOM1O60784 492 aa29.86■■■□□ 2.37
RPAP3-207ENST00000551293 CAMSAP2Q08AD1 1489 aa29.86■■■□□ 2.37
RPAP3-207ENST00000551293 ANKLE2Q86XL3 938 aa29.85■■■□□ 2.37
RPAP3-207ENST00000551293 SENP3Q9H4L4 574 aaPredicted RBP29.85■■■□□ 2.37
RPAP3-207ENST00000551293 CPS1P31327 1500 aa29.83■■■□□ 2.37
RPAP3-207ENST00000551293 NCOA2Q15596 1464 aa29.82■■■□□ 2.36
RPAP3-207ENST00000551293 MED1Q15648 1581 aaPredicted RBP29.81■■■□□ 2.36
RPAP3-207ENST00000551293 MIA2Q96PC5 1412 aa29.8■■■□□ 2.36
RPAP3-207ENST00000551293 THEMISQ8N1K5 641 aaPredicted RBP29.8■■■□□ 2.36
RPAP3-207ENST00000551293 VWDEQ8N2E2 1590 aa29.77■■■□□ 2.36
RPAP3-207ENST00000551293 NPHP4O75161 1426 aaPredicted RBP29.77■■■□□ 2.36
RPAP3-207ENST00000551293 UGGT1Q9NYU2 1555 aa29.77■■■□□ 2.36
RPAP3-207ENST00000551293 FAM135AQ9P2D6 1515 aa29.74■■■□□ 2.35
RPAP3-207ENST00000551293 TSPY4P0CV99 314 aa29.73■■■□□ 2.35
RPAP3-207ENST00000551293 TSPY10P0CW01 314 aa29.73■■■□□ 2.35
RPAP3-207ENST00000551293 RSPH4AQ5TD94 716 aa29.73■■■□□ 2.35
RPAP3-207ENST00000551293 NLRP1Q9C000 1473 aa29.73■■■□□ 2.35
RPAP3-207ENST00000551293 PHF23Q9BUL5 403 aaPredicted RBP29.69■■■□□ 2.34
RPAP3-207ENST00000551293 ALKQ9UM73 1620 aa29.69■■■□□ 2.34
RPAP3-207ENST00000551293 MED14O60244 1454 aa29.68■■■□□ 2.34
RPAP3-207ENST00000551293 ARHGEF5Q12774 1597 aa29.66■■■□□ 2.34
RPAP3-207ENST00000551293 DEPDC5O75140 1603 aa29.65■■■□□ 2.34
RPAP3-207ENST00000551293 IQGAP1P46940 1657 aa29.65■■■□□ 2.34
RPAP3-207ENST00000551293 ABCC3O15438 1527 aa29.64■■■□□ 2.34
RPAP3-207ENST00000551293 STRCP1A6NGW2 1772 aa29.61■■■□□ 2.33
RPAP3-207ENST00000551293 LRRC7Q96NW7 1537 aa29.61■■■□□ 2.33
RPAP3-207ENST00000551293 ERVK-7P63135 1459 aa29.59■■■□□ 2.33
RPAP3-207ENST00000551293 RNF17Q9BXT8 1623 aaKnown RBP29.59■■■□□ 2.33
RPAP3-207ENST00000551293 LRRC9Q6ZRR7 1453 aa29.55■■■□□ 2.32
RPAP3-207ENST00000551293 KANK4Q5T7N3 995 aaPredicted RBP29.53■■■□□ 2.32
RPAP3-207ENST00000551293 ZC3H13Q5T200 1668 aaKnown RBP29.52■■■□□ 2.32
RPAP3-207ENST00000551293 MROH1Q8NDA8 1641 aa29.52■■■□□ 2.32
RPAP3-207ENST00000551293 MAST1Q9Y2H9 1570 aa29.52■■■□□ 2.32
RPAP3-207ENST00000551293 CEP152O94986 1710 aa29.51■■■□□ 2.32
RPAP3-207ENST00000551293 LTKP29376 864 aa29.51■■■□□ 2.31
RPAP3-207ENST00000551293 CFAP65Q6ZU64 1925 aaKnown RBP29.51■■■□□ 2.31
RPAP3-207ENST00000551293 TXNDC2Q86VQ3 553 aa29.49■■■□□ 2.31
RPAP3-207ENST00000551293 UBR1Q8IWV7 1749 aa29.48■■■□□ 2.31
RPAP3-207ENST00000551293 SCAF11Q99590 1463 aaKnown RBP29.48■■■□□ 2.31
RPAP3-207ENST00000551293 EIF2AK4Q9P2K8 1649 aaKnown RBP29.47■■■□□ 2.31
RPAP3-207ENST00000551293 SYNMO15061 1565 aa29.47■■■□□ 2.31
RPAP3-207ENST00000551293 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29.45■■■□□ 2.31
RPAP3-207ENST00000551293 VPS8Q8N3P4 1428 aa29.45■■■□□ 2.3
RPAP3-207ENST00000551293 LOC105371045A0A1W2PR82 267 aa29.44■■■□□ 2.3
RPAP3-207ENST00000551293 RRP7BPQ9NSQ0 103 aa29.42■■■□□ 2.3
RPAP3-207ENST00000551293 MYOM3Q5VTT5 1437 aa29.41■■■□□ 2.3
RPAP3-207ENST00000551293 DUOX2Q9NRD8 1548 aa29.4■■■□□ 2.3
RPAP3-207ENST00000551293 RGS17Q9UGC6 210 aaPredicted RBP29.39■■■□□ 2.3
RPAP3-207ENST00000551293 KIF15Q9NS87 1388 aa29.39■■■□□ 2.29
RPAP3-207ENST00000551293 ARHGAP23Q9P227 1491 aa29.38■■■□□ 2.29
RPAP3-207ENST00000551293 EID1Q9Y6B2 187 aa29.38■■■□□ 2.29
RPAP3-207ENST00000551293 SLIT1O75093 1534 aa29.36■■■□□ 2.29
RPAP3-207ENST00000551293 STAG3Q9UJ98 1225 aa29.36■■■□□ 2.29
RPAP3-207ENST00000551293 RBM33Q96EV2 1170 aaKnown RBP29.35■■■□□ 2.29
RPAP3-207ENST00000551293 PIK3C2BO00750 1634 aa29.33■■■□□ 2.29
RPAP3-207ENST00000551293 XIRP1Q702N8 1843 aaKnown RBP29.33■■■□□ 2.29
RPAP3-207ENST00000551293 PRDM15P57071 1507 aaPredicted RBP29.31■■■□□ 2.28
RPAP3-207ENST00000551293 ABCC5O15440 1437 aa29.31■■■□□ 2.28
RPAP3-207ENST00000551293 ARHGAP31Q2M1Z3 1444 aa29.31■■■□□ 2.28
RPAP3-207ENST00000551293 TMEM2Q9UHN6 1383 aa29.3■■■□□ 2.28
RPAP3-207ENST00000551293 SLC26A8Q96RN1 970 aa29.29■■■□□ 2.28
RPAP3-207ENST00000551293 ERBINQ96RT1 1412 aa29.28■■■□□ 2.28
RPAP3-207ENST00000551293 TMEM94Q12767 1356 aa29.27■■■□□ 2.28
RPAP3-207ENST00000551293 CHIC2Q9UKJ5 165 aa29.27■■■□□ 2.28
RPAP3-207ENST00000551293 IDI1Q13907 227 aa29.25■■■□□ 2.27
RPAP3-207ENST00000551293 KANK1Q14678 1352 aa29.25■■■□□ 2.27
RPAP3-207ENST00000551293 MAP3K1Q13233 1512 aa29.25■■■□□ 2.27
RPAP3-207ENST00000551293 PROSER2Q86WR7 435 aaPredicted RBP29.23■■■□□ 2.27
RPAP3-207ENST00000551293 CROCC2H7BZ55 1655 aa29.23■■■□□ 2.27
RPAP3-207ENST00000551293 FAM135BQ49AJ0 1406 aa29.22■■■□□ 2.27
RPAP3-207ENST00000551293 PTPN23Q9H3S7 1636 aa29.22■■■□□ 2.27
RPAP3-207ENST00000551293 DAPK1P53355 1430 aa29.21■■■□□ 2.27
RPAP3-207ENST00000551293 EFCAB6Q5THR3 1501 aa29.21■■■□□ 2.27
RPAP3-207ENST00000551293 POTEAQ6S8J7 498 aa29.21■■■□□ 2.27
RPAP3-207ENST00000551293 KCNA6P17658 529 aa29.2■■■□□ 2.26
RPAP3-207ENST00000551293 BCANQ96GW7 911 aa29.2■■■□□ 2.26
RPAP3-207ENST00000551293 ROBO1Q9Y6N7 1651 aa29.15■■■□□ 2.26
RPAP3-207ENST00000551293 TET3O43151 1660 aa29.13■■■□□ 2.25
RPAP3-207ENST00000551293 APLP2Q06481 763 aa29.13■■■□□ 2.25
RPAP3-207ENST00000551293 ANKRD30AQ9BXX3 1397 aa29.12■■■□□ 2.25
RPAP3-207ENST00000551293 FGD6Q6ZV73 1430 aa29.11■■■□□ 2.25
RPAP3-207ENST00000551293 LMTK2Q8IWU2 1503 aa29.1■■■□□ 2.25
RPAP3-207ENST00000551293 NOS1P29475 1434 aa29.08■■■□□ 2.25
RPAP3-207ENST00000551293 ADGRB3O60242 1522 aa29.08■■■□□ 2.25
RPAP3-207ENST00000551293 KDM5AP29375 1690 aaKnown RBP29.06■■■□□ 2.24
RPAP3-207ENST00000551293 MSH6P52701 1360 aa29.05■■■□□ 2.24
RPAP3-207ENST00000551293 SLAIN2Q9P270 581 aa29.04■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms