RNA–Protein interactions for RNA: ENST00000550869.5

ERBB3-216, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 4

Gene ERBB3, Length 572 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-216ENST00000550869 PLA2R1Q13018 1463 aa18.43■□□□□ 0.54
ERBB3-216ENST00000550869 CCDC141Q6ZP82 1450 aa18.43■□□□□ 0.54
ERBB3-216ENST00000550869 ZNF644Q9H582 1327 aaPredicted RBP18.43■□□□□ 0.54
ERBB3-216ENST00000550869 LTBP4Q8N2S1 1624 aa18.42■□□□□ 0.54
ERBB3-216ENST00000550869 RSPH4AQ5TD94 716 aa18.42■□□□□ 0.54
ERBB3-216ENST00000550869 DHX29Q7Z478 1369 aaKnown RBP18.42■□□□□ 0.54
ERBB3-216ENST00000550869 GGT6Q6P531 493 aa18.41■□□□□ 0.54
ERBB3-216ENST00000550869 CAMSAP2Q08AD1 1489 aa18.4■□□□□ 0.54
ERBB3-216ENST00000550869 ARHGEF5Q12774 1597 aa18.39■□□□□ 0.53
ERBB3-216ENST00000550869 PKD2Q13563 968 aa18.37■□□□□ 0.53
ERBB3-216ENST00000550869 KDM5DQ9BY66 1539 aa18.36■□□□□ 0.53
ERBB3-216ENST00000550869 A2ML1A8K2U0 1454 aa18.35■□□□□ 0.53
ERBB3-216ENST00000550869 FAM50AQ14320 339 aaKnown RBP18.34■□□□□ 0.53
ERBB3-216ENST00000550869 PCGF6Q9BYE7 350 aa18.33■□□□□ 0.52
ERBB3-216ENST00000550869 DNMT1P26358 1616 aaKnown RBP18.33■□□□□ 0.52
ERBB3-216ENST00000550869 PZPP20742 1482 aa18.33■□□□□ 0.52
ERBB3-216ENST00000550869 NCKAP5LQ9HCH0 1330 aa18.31■□□□□ 0.52
ERBB3-216ENST00000550869 KIF3BO15066 747 aa18.31■□□□□ 0.52
ERBB3-216ENST00000550869 POLR1AO95602 1720 aaPredicted RBP18.31■□□□□ 0.52
ERBB3-216ENST00000550869 ABCC5O15440 1437 aa18.31■□□□□ 0.52
ERBB3-216ENST00000550869 MAST1Q9Y2H9 1570 aa18.3■□□□□ 0.52
ERBB3-216ENST00000550869 TSPY4P0CV99 314 aa18.3■□□□□ 0.52
ERBB3-216ENST00000550869 TSPY10P0CW01 314 aa18.3■□□□□ 0.52
ERBB3-216ENST00000550869 RNF17Q9BXT8 1623 aaKnown RBP18.29■□□□□ 0.52
ERBB3-216ENST00000550869 TNRQ92752 1358 aa18.29■□□□□ 0.52
ERBB3-216ENST00000550869 ZC3H13Q5T200 1668 aaKnown RBP18.28■□□□□ 0.52
ERBB3-216ENST00000550869 DAPK1P53355 1430 aa18.28■□□□□ 0.52
ERBB3-216ENST00000550869 EIF2AK4Q9P2K8 1649 aaKnown RBP18.27■□□□□ 0.52
ERBB3-216ENST00000550869 WASHC2CQ9Y4E1 1318 aa18.27■□□□□ 0.52
ERBB3-216ENST00000550869 NLRP1Q9C000 1473 aa18.26■□□□□ 0.51
ERBB3-216ENST00000550869 ZNF335Q9H4Z2 1342 aaPredicted RBP18.24■□□□□ 0.51
ERBB3-216ENST00000550869 SHANK2Q9UPX8 1470 aa18.24■□□□□ 0.51
ERBB3-216ENST00000550869 CROCC2H7BZ55 1655 aa18.23■□□□□ 0.51
ERBB3-216ENST00000550869 NEURL4Q96JN8 1562 aa18.22■□□□□ 0.51
ERBB3-216ENST00000550869 ROCK1Q13464 1354 aa18.22■□□□□ 0.51
ERBB3-216ENST00000550869 DISP3Q9P2K9 1392 aa18.21■□□□□ 0.51
ERBB3-216ENST00000550869 FBXO31Q5XUX0 539 aaPredicted RBP18.21■□□□□ 0.51
ERBB3-216ENST00000550869 ABCC3O15438 1527 aa18.21■□□□□ 0.51
ERBB3-216ENST00000550869 SPATA31D1Q6ZQQ2 1576 aa18.21■□□□□ 0.51
ERBB3-216ENST00000550869 ADGRL2O95490 1459 aa18.2■□□□□ 0.5
ERBB3-216ENST00000550869 DEPDC5O75140 1603 aa18.2■□□□□ 0.5
ERBB3-216ENST00000550869 CPS1P31327 1500 aa18.2■□□□□ 0.5
ERBB3-216ENST00000550869 ITGAEP38570 1179 aa18.2■□□□□ 0.5
ERBB3-216ENST00000550869 UGGT1Q9NYU2 1555 aa18.2■□□□□ 0.5
ERBB3-216ENST00000550869 THEMISQ8N1K5 641 aaPredicted RBP18.19■□□□□ 0.5
ERBB3-216ENST00000550869 DUOX2Q9NRD8 1548 aa18.18■□□□□ 0.5
ERBB3-216ENST00000550869 UBAP1LF5GYI3 381 aa18.17■□□□□ 0.5
ERBB3-216ENST00000550869 ANKLE2Q86XL3 938 aa18.17■□□□□ 0.5
ERBB3-216ENST00000550869 MED14O60244 1454 aa18.17■□□□□ 0.5
ERBB3-216ENST00000550869 MROH1Q8NDA8 1641 aa18.16■□□□□ 0.5
ERBB3-216ENST00000550869 HFM1A2PYH4 1435 aa18.15■□□□□ 0.5
ERBB3-216ENST00000550869 CHIC2Q9UKJ5 165 aa18.14■□□□□ 0.49
ERBB3-216ENST00000550869 CEP152O94986 1710 aa18.14■□□□□ 0.49
ERBB3-216ENST00000550869 NAIPQ13075 1403 aa18.14■□□□□ 0.49
ERBB3-216ENST00000550869 ERVK-7P63135 1459 aa18.14■□□□□ 0.49
ERBB3-216ENST00000550869 IQGAP1P46940 1657 aa18.13■□□□□ 0.49
ERBB3-216ENST00000550869 HRCP23327 699 aa18.13■□□□□ 0.49
ERBB3-216ENST00000550869 PRDM15P57071 1507 aaPredicted RBP18.13■□□□□ 0.49
ERBB3-216ENST00000550869 ANKRD30AQ9BXX3 1397 aa18.12■□□□□ 0.49
ERBB3-216ENST00000550869 NPHP4O75161 1426 aaPredicted RBP18.12■□□□□ 0.49
ERBB3-216ENST00000550869 ERBINQ96RT1 1412 aa18.12■□□□□ 0.49
ERBB3-216ENST00000550869 SETD5Q9C0A6 1442 aa18.12■□□□□ 0.49
ERBB3-216ENST00000550869 VWDEQ8N2E2 1590 aa18.12■□□□□ 0.49
ERBB3-216ENST00000550869 UBR1Q8IWV7 1749 aa18.09■□□□□ 0.49
ERBB3-216ENST00000550869 GCC2Q8IWJ2 1684 aa18.09■□□□□ 0.49
ERBB3-216ENST00000550869 ARHGAP31Q2M1Z3 1444 aa18.09■□□□□ 0.49
ERBB3-216ENST00000550869 KIF15Q9NS87 1388 aa18.09■□□□□ 0.49
ERBB3-216ENST00000550869 RRP7BPQ9NSQ0 103 aa18.09■□□□□ 0.49
ERBB3-216ENST00000550869 TOM1O60784 492 aa18.07■□□□□ 0.48
ERBB3-216ENST00000550869 ILDR2Q71H61 639 aa18.07■□□□□ 0.48
ERBB3-216ENST00000550869 SYNMO15061 1565 aa18.07■□□□□ 0.48
ERBB3-216ENST00000550869 RAB3GAP2Q9H2M9 1393 aa18.06■□□□□ 0.48
ERBB3-216ENST00000550869 CFAP65Q6ZU64 1925 aaKnown RBP18.06■□□□□ 0.48
ERBB3-216ENST00000550869 SOCS7O14512 581 aa18.06■□□□□ 0.48
ERBB3-216ENST00000550869 SLIT1O75093 1534 aa18.03■□□□□ 0.48
ERBB3-216ENST00000550869 KDM5AP29375 1690 aaKnown RBP18.03■□□□□ 0.48
ERBB3-216ENST00000550869 ANKRD50Q9ULJ7 1429 aa18.03■□□□□ 0.48
ERBB3-216ENST00000550869 SCAF11Q99590 1463 aaKnown RBP18.02■□□□□ 0.48
ERBB3-216ENST00000550869 ARHGAP23Q9P227 1491 aa18.02■□□□□ 0.48
ERBB3-216ENST00000550869 KANK1Q14678 1352 aa18.02■□□□□ 0.47
ERBB3-216ENST00000550869 STRCP1A6NGW2 1772 aa18.01■□□□□ 0.47
ERBB3-216ENST00000550869 ACIN1Q9UKV3 1341 aaKnown RBP18■□□□□ 0.47
ERBB3-216ENST00000550869 LMTK2Q8IWU2 1503 aa18■□□□□ 0.47
ERBB3-216ENST00000550869 SCAF1Q9H7N4 1312 aaKnown RBP17.98■□□□□ 0.47
ERBB3-216ENST00000550869 LRRC7Q96NW7 1537 aa17.98■□□□□ 0.47
ERBB3-216ENST00000550869 PIP4K2BP78356 416 aa17.98■□□□□ 0.47
ERBB3-216ENST00000550869 PIK3C2BO00750 1634 aa17.98■□□□□ 0.47
ERBB3-216ENST00000550869 ALKQ9UM73 1620 aa17.97■□□□□ 0.47
ERBB3-216ENST00000550869 HSPA1LP34931 641 aa17.96■□□□□ 0.47
ERBB3-216ENST00000550869 EID1Q9Y6B2 187 aa17.95■□□□□ 0.46
ERBB3-216ENST00000550869 EFCAB6Q5THR3 1501 aa17.94■□□□□ 0.46
ERBB3-216ENST00000550869 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.94■□□□□ 0.463e-8■□□□□ 10
ERBB3-216ENST00000550869 MED1Q15648 1581 aaPredicted RBP17.94■□□□□ 0.46
ERBB3-216ENST00000550869 TXNDC2Q86VQ3 553 aa17.93■□□□□ 0.46
ERBB3-216ENST00000550869 TMEM2Q9UHN6 1383 aa17.92■□□□□ 0.46
ERBB3-216ENST00000550869 LTKP29376 864 aa17.92■□□□□ 0.46
ERBB3-216ENST00000550869 RPRD2Q5VT52 1461 aaKnown RBP17.9■□□□□ 0.46
ERBB3-216ENST00000550869 STAG3Q9UJ98 1225 aa17.9■□□□□ 0.46
ERBB3-216ENST00000550869 UNC13BO14795 1591 aa17.9■□□□□ 0.46
ERBB3-216ENST00000550869 DHX57Q6P158 1386 aaKnown RBP17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms